Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008298_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:4550744:4552774:1 gene:Zm00001d008298 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:empty pericarp7 description: empty pericarp7
Sequence

ATGCCCCTCGTGACCTACCGCTACCAGGCCCTCAAGGAATCCCTCGCCGCCGCCATCACC
TCCTCCCCGCACGCCGCCGACCCTCGACGACCCCACGCGCTCGCCGTCGTCTCTGGTCTC
GCCGCCAATGGCTACCTCGCGTCCCTCCTCGTCGCCCGCTACGCCCGCCTCGGCGAACCC
GATGCCGCGCGCGGGGTCTTCGACGCCGCCGCCTCCTCCCCCTACGCGACGCCGCCCAAG
CCGCTCCTCTACAACGCCATGCTCCGTGGCTACCTCTCCCTGGGCCTCCCGCGCGAGGCC
GTTGCGCTCCTCCGCGCCATGCTTGCGTCCGGCTCCTGCGCGCCCGACCGCCACACGTAC
CACCTCGCCGCCACGGCCTGCGCGCGCGCCCCGGACCTTGGCCTAGGCCGCCGCTTCGAG
GCTGCCGCCGCGGCATGTGGGCTCGCGGCGTCCGACCTCCTGGTGGCCACTGCACTCATC
GGGATGCATGCCGAGGCCGGGGACATGGGCGCCGCGCGCAGGGTGTTCGACGGAATGCCT
TGCCGGGACGCTGTGGCGTGGAACGCCGTGATTGGTGGGTATGCGCGCGCGGGGCACCTG
TCTGAGGCTGTGGAGCTGTTTGGCATGATGAGGTCTGCGGTTGGAGCGTGCCCAACTGAG
GCCACGCTTGTGAGCTTGGTTTCTGGTTATGCCGTGTTCGGTTCTTGGAAGGGCCATGGC
ATGATGCACGCCGCTGTGATTAAGTCTGGCTTCCAGCGCAGCCTCTTCGTTTCCAATGCT
CTCCTGGAGATGTACACAGAGTTGGGTTGTTTGAGTGAGGCATTGTTGGTGTTCCGGCAG
ATGGAGGTGAAGGATTCTGTGACTTGGAGTTCGATGATTGGTGGACTTGTGCGGAGTAAC
AAACCGGGTTATGCTGTTAGGCTTTTCCACTGGATGCTCTCGAAATCGGAGGTGTTGGTC
ACACGGTCTATCTTGCTCAATGTGATCTTGGCCTGCTCCGAGTTGGGGGACTGGAGAGAA
GGAAAATGGATTGAAGAAAACTTTGTCATGTGTAATGGCAGTGAATTCAAGAGAGATCCC
TCTGTAGTAACCAGACTGATATATATGTACGCAAAGTGTGGACAGTTAGGTTCGTCTGAG
ACTCTTCTACATGAATCCACAGAGGTTAGATGCGATGTGGTTGCATGGAATGCCCTGATC
AAAGCCTGTGGAGAGCTTGGACTAGTGGAAAAAGCAATCGGGTTTGCGATACAAATGCAT
AGGACAGGCATTTACCCAGACAACGTTACATTCTTGGAGATTCTACATATGATCTCATTA
ATTCCATCACTGAAAAAGGGGATGGAAGTTCATGCTCACATTGTTAAAAGAGGTTTCCAG
AATGAACGGGCGATTGCTAATTCACTTATTTACATGTATGGTCGATGCGGGAGTCTCAGT
CTTTCAGTTAATGCCTTTACTGGGATTATGGATAAGGATGCAATCTCTTGGGCTTCTATG
ATGCAGGTTTATGCATGGAGTGGACTTGCACCAGAAGTTGTTAAGCTTTTTGAGATGATG
AAGAAAACAAAAGTACAACCCAACCACTACACTTTAATTGCTGTGTTGACTGCCTATAAA
AACACAGGTCTTGTTGAGGAGGGAATGGGCCTGCTTAAGTGCATGAAAGAGCAGTATGGT
CTGGAGCCATTTATAGAGCATGTTTCATGTGTTGTTGATATGCTCTGTCGTACTGGACGC
TTGAGTGATGCATATCACCTGATCCAGAGTTCCCACTCTGAACATGCAAGAAACCCTAAA
TTGTGGGGGACATTACTAAGTGGTTCCCGTTACTGGGGGGATTTGGTGATTGGAGAAGCA
GCAGCTAGGCATCTCTCGTCTTTGGATCCAGGAAGCAACGCTAACTATAAGATGCTGGCT
GATATTTATGTTTCAACTGGGAGAAGGGACAGAGCTGAGGATGTTCTGAGAATGTCGATG
TCAAAAGAACTGGACTTGAGACCAGGCTGTAGCTGGACTGAAGGTGGCTAA

Peptide Sequence

PEP ID

Zm00001d008298_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:4550744:4552774:1 gene:Zm00001d008298 transcript:Zm00001d008298_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:empty pericarp7 description: empty pericarp7
Sequence

MPLVTYRYQALKESLAAAITSSPHAADPRRPHALAVVSGLAANGYLASLLVARYARLGEP
DAARGVFDAAASSPYATPPKPLLYNAMLRGYLSLGLPREAVALLRAMLASGSCAPDRHTY
HLAATACARAPDLGLGRRFEAAAAACGLAASDLLVATALIGMHAEAGDMGAARRVFDGMP
CRDAVAWNAVIGGYARAGHLSEAVELFGMMRSAVGACPTEATLVSLVSGYAVFGSWKGHG
MMHAAVIKSGFQRSLFVSNALLEMYTELGCLSEALLVFRQMEVKDSVTWSSMIGGLVRSN
KPGYAVRLFHWMLSKSEVLVTRSILLNVILACSELGDWREGKWIEENFVMCNGSEFKRDP
SVVTRLIYMYAKCGQLGSSETLLHESTEVRCDVVAWNALIKACGELGLVEKAIGFAIQMH
RTGIYPDNVTFLEILHMISLIPSLKKGMEVHAHIVKRGFQNERAIANSLIYMYGRCGSLS
LSVNAFTGIMDKDAISWASMMQVYAWSGLAPEVVKLFEMMKKTKVQPNHYTLIAVLTAYK
NTGLVEEGMGLLKCMKEQYGLEPFIEHVSCVVDMLCRTGRLSDAYHLIQSSHSEHARNPK
LWGTLLSGSRYWGDLVIGEAAARHLSSLDPGSNANYKMLADIYVSTGRRDRAEDVLRMSM
SKELDLRPGCSWTEGG

Transcript Sequence

Transcript ID

Zm00001d008298_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:4550744:4552774:1 gene:Zm00001d008298 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:empty pericarp7 description: empty pericarp7
Sequence

ATGCCCCTCGTGACCTACCGCTACCAGGCCCTCAAGGAATCCCTCGCCGCCGCCATCACC
TCCTCCCCGCACGCCGCCGACCCTCGACGACCCCACGCGCTCGCCGTCGTCTCTGGTCTC
GCCGCCAATGGCTACCTCGCGTCCCTCCTCGTCGCCCGCTACGCCCGCCTCGGCGAACCC
GATGCCGCGCGCGGGGTCTTCGACGCCGCCGCCTCCTCCCCCTACGCGACGCCGCCCAAG
CCGCTCCTCTACAACGCCATGCTCCGTGGCTACCTCTCCCTGGGCCTCCCGCGCGAGGCC
GTTGCGCTCCTCCGCGCCATGCTTGCGTCCGGCTCCTGCGCGCCCGACCGCCACACGTAC
CACCTCGCCGCCACGGCCTGCGCGCGCGCCCCGGACCTTGGCCTAGGCCGCCGCTTCGAG
GCTGCCGCCGCGGCATGTGGGCTCGCGGCGTCCGACCTCCTGGTGGCCACTGCACTCATC
GGGATGCATGCCGAGGCCGGGGACATGGGCGCCGCGCGCAGGGTGTTCGACGGAATGCCT
TGCCGGGACGCTGTGGCGTGGAACGCCGTGATTGGTGGGTATGCGCGCGCGGGGCACCTG
TCTGAGGCTGTGGAGCTGTTTGGCATGATGAGGTCTGCGGTTGGAGCGTGCCCAACTGAG
GCCACGCTTGTGAGCTTGGTTTCTGGTTATGCCGTGTTCGGTTCTTGGAAGGGCCATGGC
ATGATGCACGCCGCTGTGATTAAGTCTGGCTTCCAGCGCAGCCTCTTCGTTTCCAATGCT
CTCCTGGAGATGTACACAGAGTTGGGTTGTTTGAGTGAGGCATTGTTGGTGTTCCGGCAG
ATGGAGGTGAAGGATTCTGTGACTTGGAGTTCGATGATTGGTGGACTTGTGCGGAGTAAC
AAACCGGGTTATGCTGTTAGGCTTTTCCACTGGATGCTCTCGAAATCGGAGGTGTTGGTC
ACACGGTCTATCTTGCTCAATGTGATCTTGGCCTGCTCCGAGTTGGGGGACTGGAGAGAA
GGAAAATGGATTGAAGAAAACTTTGTCATGTGTAATGGCAGTGAATTCAAGAGAGATCCC
TCTGTAGTAACCAGACTGATATATATGTACGCAAAGTGTGGACAGTTAGGTTCGTCTGAG
ACTCTTCTACATGAATCCACAGAGGTTAGATGCGATGTGGTTGCATGGAATGCCCTGATC
AAAGCCTGTGGAGAGCTTGGACTAGTGGAAAAAGCAATCGGGTTTGCGATACAAATGCAT
AGGACAGGCATTTACCCAGACAACGTTACATTCTTGGAGATTCTACATATGATCTCATTA
ATTCCATCACTGAAAAAGGGGATGGAAGTTCATGCTCACATTGTTAAAAGAGGTTTCCAG
AATGAACGGGCGATTGCTAATTCACTTATTTACATGTATGGTCGATGCGGGAGTCTCAGT
CTTTCAGTTAATGCCTTTACTGGGATTATGGATAAGGATGCAATCTCTTGGGCTTCTATG
ATGCAGGTTTATGCATGGAGTGGACTTGCACCAGAAGTTGTTAAGCTTTTTGAGATGATG
AAGAAAACAAAAGTACAACCCAACCACTACACTTTAATTGCTGTGTTGACTGCCTATAAA
AACACAGGTCTTGTTGAGGAGGGAATGGGCCTGCTTAAGTGCATGAAAGAGCAGTATGGT
CTGGAGCCATTTATAGAGCATGTTTCATGTGTTGTTGATATGCTCTGTCGTACTGGACGC
TTGAGTGATGCATATCACCTGATCCAGAGTTCCCACTCTGAACATGCAAGAAACCCTAAA
TTGTGGGGGACATTACTAAGTGGTTCCCGTTACTGGGGGGATTTGGTGATTGGAGAAGCA
GCAGCTAGGCATCTCTCGTCTTTGGATCCAGGAAGCAACGCTAACTATAAGATGCTGGCT
GATATTTATGTTTCAACTGGGAGAAGGGACAGAGCTGAGGATGTTCTGAGAATGTCGATG
TCAAAAGAACTGGACTTGAGACCAGGCTGTAGCTGGACTGAAGGTGGCTAA