Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008287_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:4114922:4117752:1 gene:Zm00001d008287 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenazine biosynthesis PhzC/PhzF protein
Sequence

ATGGGCAAGGACGGCATCCAGTACGCAGTGGTGGACGCCTTCACGGCGGAGCCGTTCAAG
GGCAACCCAGCCGCGGTGTGCCTCCTCGAGGACGCCGCCAAGGCCGCCGACGAGCGGTGG
ATGCAGTCCGTCGCCGCCGAGTTCAACATCTCCGAGACCGCCTTCCTCCTCCGGGAAAAG
TCCTCCGCGGCCGGCGCCGTCCCGCTGTTCCAGCTCCGATGGTTCACCCCCGTCGCTGAG
GTGGAGCTCTGCGGCCACGCCACGCTGGCTTCCGCCCACTTCCTCTTCACATCCGTCCTC
GCGGAGCACGAGAAGCTCGTCGAGTTCTCGACCAAGTCCGGGATTCTTACGGCCAAAAAG
GTCCCTGCGCCGCAGAGCACGGGCGTGTCGGGCGAGGGGAAGCTGTTCATTGAGCTGGAT
TTCCCCACGATTGACCTTGTTGATTGCCATCCTTCCGAGCTGCCGGCAATCCCCGACACC
CTCAACGGAGCCTCCATTGTCAGCGTTCACAAGTCAACGACGGCCGGTGACCTCATTGTG
GAGCTTTCATCAGGAAAGGAGGTTGCTGATATCATTCCTAACATTCATGAAATTGAAAAG
TGTTCCGGCAGAGGAATTATTGTTACAGGGCCAGCGCCTGCTGGATCTGGCTACGACTTC
TTCACGCGTTTTTTCTGCCCAAAATTTGGAATAGATGAGGATCCCGTTTGTGGCAGTGCA
CATTGTGTTTTAGCACCTTACTGGGGTGGGAAGCTGGGGAAACACAAACTGATAGCGTTT
CAAGCATCCCCTCGGAGTGGAATACTATACCTGGAGTTAGAAGCTACAGGCAGGAGAGTG
CGAATTCAGGGAGAAGCGGTCAGTGTGATGACTGGCACCCTCTTAGCATAA

Peptide Sequence

PEP ID

Zm00001d008287_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:4114922:4117752:1 gene:Zm00001d008287 transcript:Zm00001d008287_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenazine biosynthesis PhzC/PhzF protein
Sequence

MGKDGIQYAVVDAFTAEPFKGNPAAVCLLEDAAKAADERWMQSVAAEFNISETAFLLREK
SSAAGAVPLFQLRWFTPVAEVELCGHATLASAHFLFTSVLAEHEKLVEFSTKSGILTAKK
VPAPQSTGVSGEGKLFIELDFPTIDLVDCHPSELPAIPDTLNGASIVSVHKSTTAGDLIV
ELSSGKEVADIIPNIHEIEKCSGRGIIVTGPAPAGSGYDFFTRFFCPKFGIDEDPVCGSA
HCVLAPYWGGKLGKHKLIAFQASPRSGILYLELEATGRRVRIQGEAVSVMTGTLLA

Transcript Sequence

Transcript ID

Zm00001d008287_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:4114922:4117752:1 gene:Zm00001d008287 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenazine biosynthesis PhzC/PhzF protein
Sequence

ATACAAAAAAGGCAGACGGCTACCCGTTCGAAAAAAAAAACAGCAGCAGCCGGCGGCGGC
CATAGCCCAGGAGCCCGGAGCTGTTTCTTCGTCGCAGGAATGGGCAAGGACGGCATCCAG
TACGCAGTGGTGGACGCCTTCACGGCGGAGCCGTTCAAGGGCAACCCAGCCGCGGTGTGC
CTCCTCGAGGACGCCGCCAAGGCCGCCGACGAGCGGTGGATGCAGTCCGTCGCCGCCGAG
TTCAACATCTCCGAGACCGCCTTCCTCCTCCGGGAAAAGTCCTCCGCGGCCGGCGCCGTC
CCGCTGTTCCAGCTCCGATGGTTCACCCCCGTCGCTGAGGTGGAGCTCTGCGGCCACGCC
ACGCTGGCTTCCGCCCACTTCCTCTTCACATCCGTCCTCGCGGAGCACGAGAAGCTCGTC
GAGTTCTCGACCAAGTCCGGGATTCTTACGGCCAAAAAGGTCCCTGCGCCGCAGAGCACG
GGCGTGTCGGGCGAGGGGAAGCTGTTCATTGAGCTGGATTTCCCCACGATTGACCTTGTT
GATTGCCATCCTTCCGAGCTGCCGGCAATCCCCGACACCCTCAACGGAGCCTCCATTGTC
AGCGTTCACAAGTCAACGACGGCCGGTGACCTCATTGTGGAGCTTTCATCAGGAAAGGAG
GTTGCTGATATCATTCCTAACATTCATGAAATTGAAAAGTGTTCCGGCAGAGGAATTATT
GTTACAGGGCCAGCGCCTGCTGGATCTGGCTACGACTTCTTCACGCGTTTTTTCTGCCCA
AAATTTGGAATAGATGAGGATCCCGTTTGTGGCAGTGCACATTGTGTTTTAGCACCTTAC
TGGGGTGGGAAGCTGGGGAAACACAAACTGATAGCGTTTCAAGCATCCCCTCGGAGTGGA
ATACTATACCTGGAGTTAGAAGCTACAGGCAGGAGAGTGCGAATTCAGGGAGAAGCGGTC
AGTGTGATGACTGGCACCCTCTTAGCATAACCCCTGCTCAATGAACATCCTATGTCTTCA
CTTCAGTTGTGTGGCATGATTTCTCTGCAGCTAGGAATAAATTAAGTCTCTTTTCACCTG
TCCAAAGGTGTTAGATACACTGCTTCCAGACTATGAAGCAGAGTGTATGAGGATGTTTCT
TTTGAATAAATCAGTGGGTGTTCAATGTGTGTGATATCTTCTGTTTGTGTTGATCTGAAT
TGGAGCAATGAACTGGATTTATGGGCAGGAC