Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008285_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:8:4079325:4083612:1 gene:Zm00001d008285 gene_biotype:protein_coding transcript_biotype:protein_coding description:PQ-loop repeat family protein / transmembrane family protein
Sequence

ATGAAATTGGTTGACCAATACCATGGAAGCAGCTCCAACGCTGACTACTACTACATGTCA
GCAAGGTCCTTGTCCAGGAGTCCAGTGCCAACTGCTGGTATATGGTCCGGCAGTAATCGT
CAATCATCAAGAAGTCCTCCACAAATGAATGATCAAAGGGGATCTTTAATTGGTGAGATC
GCTCCGGAACATTCTGCACCATCTACTGTTACAAAAAATGCCCTCTCAGTGGCACCATGG
ATGGGTCTTCTATTGGGTACGTGCCTCTTGCACATTTTGATTGGAAACAAACATAGGGAG
ATGGCAAGTGGCACTGTCATACCAATTGGAAGAAGGCTTTTACTGTTTGTGGATGATCAT
GGAAATTCATCGCTTAGCCAGAGCAGTGGAAGTGAAATTGGAAGCTTTCTTGGTTGGGCT
ATGGCAATGATTTATATGGGTGGGCGGCTTCCCCAGATTTTGTTAAATATGCAAAGAGGC
CACGTTGAGGGGCTGAATCCATTGATGTTTACCTTTGCTTTACTGGGAAATTCAACATAC
GTAGGAAGTATACTTGTAAATAGCTTGGACTGGTCGAAACTTAGACCAAATCTCCCGTGG
CTTGTAGAATCGGGAGGATGTGTTTTGCTGGATTCTTGTATTATTCTTCAGTTCCTTTAT
TTCCATTATCGGAAACGAAGGGAGCCTTCGGATGAGCACGACAACGCAGACAAAGCCTGA

Peptide Sequence

PEP ID

Zm00001d008285_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:8:4079325:4083612:1 gene:Zm00001d008285 transcript:Zm00001d008285_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:PQ-loop repeat family protein / transmembrane family protein
Sequence

MKLVDQYHGSSSNADYYYMSARSLSRSPVPTAGIWSGSNRQSSRSPPQMNDQRGSLIGEI
APEHSAPSTVTKNALSVAPWMGLLLGTCLLHILIGNKHREMASGTVIPIGRRLLLFVDDH
GNSSLSQSSGSEIGSFLGWAMAMIYMGGRLPQILLNMQRGHVEGLNPLMFTFALLGNSTY
VGSILVNSLDWSKLRPNLPWLVESGGCVLLDSCIILQFLYFHYRKRREPSDEHDNADKA

Transcript Sequence

Transcript ID

Zm00001d008285_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:4079325:4083612:1 gene:Zm00001d008285 gene_biotype:protein_coding transcript_biotype:protein_coding description:PQ-loop repeat family protein / transmembrane family protein
Sequence

TCATTACGCGAAAAGCTTTTGGGTGCCAAGGGCAGTGCAGCATCAAGAAACAATGAATCA
GATACTACAGTTCTTATTCCAAGCTCACCTATCCCTGTTAATATGAAATTGGTTGACCAA
TACCATGGAAGCAGCTCCAACGCTGACTACTACTACATGTCAGCAAGGTCCTTGTCCAGG
AGTCCAGTGCCAACTGCTGGTATATGGTCCGGCAGTAATCGTCAATCATCAAGAAGTCCT
CCACAAATGAATGATCAAAGGGGATCTTTAATTGGTGAGATCGCTCCGGAACATTCTGCA
CCATCTACTGTTACAAAAAATGCCCTCTCAGTGGCACCATGGATGGGTCTTCTATTGGGT
ACGTGCCTCTTGCACATTTTGATTGGAAACAAACATAGGGAGATGGCAAGTGGCACTGTC
ATACCAATTGGAAGAAGGCTTTTACTGTTTGTGGATGATCATGGAAATTCATCGCTTAGC
CAGAGCAGTGGAAGTGAAATTGGAAGCTTTCTTGGTTGGGCTATGGCAATGATTTATATG
GGTGGGCGGCTTCCCCAGATTTTGTTAAATATGCAAAGAGGCCACGTTGAGGGGCTGAAT
CCATTGATGTTTACCTTTGCTTTACTGGGAAATTCAACATACGTAGGAAGTATACTTGTA
AATAGCTTGGACTGGTCGAAACTTAGACCAAATCTCCCGTGGCTTGTAGAATCGGGAGGA
TGTGTTTTGCTGGATTCTTGTATTATTCTTCAGTTCCTTTATTTCCATTATCGGAAACGA
AGGGAGCCTTCGGATGAGCACGACAACGCAGACAAAGCCTGACTGATATAGAAACTACTG
TTTCTTCTTCGGCTCAAAGGTGCGGTTCCTCGTATTATGAACATTCATCACGCTGCGTTG
CAGTTCTTGCGTTAAAGTACGGAGATAGAACTTGCGTATACAGAACTGAAGCTGAAATGG
GTACCGACACCGACCTGCCTCCTACAACGGGCTCTGGATAGCAGCAGCATCGTTGTTACC
TGAAGATTTGGAGCGTCGTTTCACTGGTTGCTGCTTGGAGGGTACTTCTCACCGCCGTCA
TGTCCTGTGGAGAGCCTTGT