Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008281_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:3859009:3863012:1 gene:Zm00001d008281 gene_biotype:protein_coding transcript_biotype:protein_coding description:EMB1374 isoform 1%3B EMB1374 isoform 2

Sequence

ATGGCCTCCGCCGCCAGCACTGCCGCCGCCGCCGGGGCCCCGCTGCGCCTCCTCTCATCC
TCTTCCAACCGTATCTCCAAGCCCTTCCTTCCCCGCCCCCACCGCCTCACCCTCTCCTCC
CCCATCTCCTTCCAGCGCCTCACAGCCCGGTCCGCGGCCTCCCCTTCCCCATCCACCGCC
ACCTCGTCCCCGTCCGGCTCTGTCGACCCGGCGCAACTGCCCCCCGCGCTACGCGACATC
GTCGGCCTCTTCCAGTCCGTCCCGGACGCGCGCACCCGGTACAAGCAGCTCCTTGCCTAT
GCCGCGCGCCTGCCGCCCATGGACCCGGCGCTCAAGACCGACGCCAACCGCGTCCGGGGT
TGCGTCTCACAGGTCTGGGTCCACGCCGAGCCCGACGAGGGCGACGCCGGCCGCCGCAGC
GTCAGGTTCCACGCCGACTCCGACGCGCAGCTCACCAAGGGCCTCGCCGCGCTGCTCGTG
CTAGGGCTCTCTGGCGCGCCCGCCGCGGATGTGGCCAGGGTGCCCGTTGACTTCATCGAG
CTGCTCGGGATCAGGCAGAGCCTCTCTCCCTCCAGGAACAGCGGCCTGCTCAACATGCTC
AGCCTCATGAAGCGCAAGGCACTTGAGATCGCCGGTGGTGACTCAACGTCAAGTCAGCAA
TCTGTCCAAGAGGTTACCAGACCGCGTCTAGTGAACGGGAAAGAGCCTGAATTTGCAGCT
TTCGAGGTGCAAGAAAAGGAAAAGGAAAGGCCACAGGATGCAGAGAGGCGCGACGAGGAT
GAACAATTGGGTCAACTTCTACCACTTGATGCAGAAGTGAATGGTGCTGCGGGCGGTGGG
AGGAAGGAGAGGATAAGGGAGAGTTTGGAGAGGGCACTTTCTCCGGTAGAGTTGGAGATT
GAAGACATATCACACCTCCACAAGGGCCATGCTGGCGTGGCTGGGACCAATGGGGAGACA
CATTTCAATGTGAGGGTGGTGTCCAAGGAGTTTGAGGGGAAGAGCTTGCTCAAGAGGCAC
AGGGCTGTCTATGATCTCCTGCAGGAGGAGCTCAAGACCGGGTTGCACGCCCTGTCAATC
GATGCAAAGACTCCATCTGAAGTTTAG

Peptide Sequence

PEP ID

Zm00001d008281_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:3859009:3863012:1 gene:Zm00001d008281 transcript:Zm00001d008281_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:EMB1374 isoform 1%3B EMB1374 isoform 2

Sequence

MASAASTAAAAGAPLRLLSSSSNRISKPFLPRPHRLTLSSPISFQRLTARSAASPSPSTA
TSSPSGSVDPAQLPPALRDIVGLFQSVPDARTRYKQLLAYAARLPPMDPALKTDANRVRG
CVSQVWVHAEPDEGDAGRRSVRFHADSDAQLTKGLAALLVLGLSGAPAADVARVPVDFIE
LLGIRQSLSPSRNSGLLNMLSLMKRKALEIAGGDSTSSQQSVQEVTRPRLVNGKEPEFAA
FEVQEKEKERPQDAERRDEDEQLGQLLPLDAEVNGAAGGGRKERIRESLERALSPVELEI
EDISHLHKGHAGVAGTNGETHFNVRVVSKEFEGKSLLKRHRAVYDLLQEELKTGLHALSI
DAKTPSEV

Transcript Sequence

Transcript ID

Zm00001d008281_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:3859009:3863012:1 gene:Zm00001d008281 gene_biotype:protein_coding transcript_biotype:protein_coding description:EMB1374 isoform 1%3B EMB1374 isoform 2

Sequence

CAAATCCTGTTCGCTCTTCTTGTCGAGACCAGACCACCGTATACTGGAGAGAAAGAATCC
TCCCTCGCCTCCCCACCCCGCCCCACCCATGGCCTCCGCCGCCAGCACTGCCGCCGCCGC
CGGGGCCCCGCTGCGCCTCCTCTCATCCTCTTCCAACCGTATCTCCAAGCCCTTCCTTCC
CCGCCCCCACCGCCTCACCCTCTCCTCCCCCATCTCCTTCCAGCGCCTCACAGCCCGGTC
CGCGGCCTCCCCTTCCCCATCCACCGCCACCTCGTCCCCGTCCGGCTCTGTCGACCCGGC
GCAACTGCCCCCCGCGCTACGCGACATCGTCGGCCTCTTCCAGTCCGTCCCGGACGCGCG
CACCCGGTACAAGCAGCTCCTTGCCTATGCCGCGCGCCTGCCGCCCATGGACCCGGCGCT
CAAGACCGACGCCAACCGCGTCCGGGGTTGCGTCTCACAGGTCTGGGTCCACGCCGAGCC
CGACGAGGGCGACGCCGGCCGCCGCAGCGTCAGGTTCCACGCCGACTCCGACGCGCAGCT
CACCAAGGGCCTCGCCGCGCTGCTCGTGCTAGGGCTCTCTGGCGCGCCCGCCGCGGATGT
GGCCAGGGTGCCCGTTGACTTCATCGAGCTGCTCGGGATCAGGCAGAGCCTCTCTCCCTC
CAGGAACAGCGGCCTGCTCAACATGCTCAGCCTCATGAAGCGCAAGGCACTTGAGATCGC
CGGTGGTGACTCAACGTCAAGTCAGCAATCTGTCCAAGAGGTTACCAGACCGCGTCTAGT
GAACGGGAAAGAGCCTGAATTTGCAGCTTTCGAGGTGCAAGAAAAGGAAAAGGAAAGGCC
ACAGGATGCAGAGAGGCGCGACGAGGATGAACAATTGGGTCAACTTCTACCACTTGATGC
AGAAGTGAATGGTGCTGCGGGCGGTGGGAGGAAGGAGAGGATAAGGGAGAGTTTGGAGAG
GGCACTTTCTCCGGTAGAGTTGGAGATTGAAGACATATCACACCTCCACAAGGGCCATGC
TGGCGTGGCTGGGACCAATGGGGAGACACATTTCAATGTGAGGGTGGTGTCCAAGGAGTT
TGAGGGGAAGAGCTTGCTCAAGAGGCACAGGGCTGTCTATGATCTCCTGCAGGAGGAGCT
CAAGACCGGGTTGCACGCCCTGTCAATCGATGCAAAGACTCCATCTGAAGTTTAGTTCAA
ATGAGCCTTGCGTGGTGGGTGACTCGATGGTGCCTAGCGTACCTGACGACGAAGAAAGGT
CGAATATCCCTCAAAAGAGGAAATCCATGTTTTGCATTGCACTGGATCCATTTATTAAGC
GAATTTTGATTTATATATTTGAAAACAAGTGAAAAAATACCCAAAGTAAATAAGTTCGAA
CATGGTAACCCACATGTTTCTTGTATGCTACAATATTGGCCTCATGGTCCAATCTGGTAG
ACATCCAAAACTAGTTCAAATGAGCCTGACTGCTTATTGATTCTTACAGAAGGTGAATCA
TTGGATTCCTCACGTTTGATATTGATGGTGGGTCGCTGGATCCATTATGCCTCACGCTGC
AATAGCATTCTAATATTCATTGGCATTAGGGTTTGTTTGGAATCAAGGAATACAAAATGG
AATACCAAACACGGGAATAGAAAAAAAAATAACGAAGGAATAAGATGAAGTGGATAGTGA
AGAGCTATGGTTTCTAAACAATAGGAATGGATATTTGAAGCTGTTTGCATTGGATGAAAA
GAAGTACAGGAACATGAGCAAGCATAGCAAGAAGGAGAGCAAAGATTCTTTCCCTTAGGT
TGGAGTGGATGTTCTCTTTCCTATATTTTGTACTACCATGGTTTTCTTTCATTTGGAAGG
GAACTCAACATTCTTTCATTCCAAA