Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008256_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:8:3193765:3222167:1 gene:Zm00001d008256 gene_biotype:protein_coding transcript_biotype:protein_coding description:NEDD8-activating enzyme E1 catalytic subunit
Sequence

ATGGAGCGAGTTAATGGGGTGAACATAGTTCCTCATTTTTGCAGGATTGAAGATAAAGAG
ATAGAGTTCTACAGTCAGTTCCACATAATTGTCCTAGGTCTGGATTCAATTGAAGCTCGA
AGCTACATCAATTCTGTGGCTTGTGGTTTCTTAGATTATGACTCAAGTGACAATCCACTC
CAAGAGACGGTTAAACCTATGGTAGATGGTGGAACTGAGGGCTTCAAGGGACACGCTAGA
GTCATTATACCTGGAACAACACCTTGCTTTGAATGCAACATATGGCTTTTTCCTCCACAG
GTTAAGTTCCCTTTATGTACTCTCGCCGAGACACCAAGAACTGCAGCTCACTGCATTGAG
TATGCTCACTTGATCAAATGGGATGAGGTTCATCCTGGAAAACCTTTTGATGGCGATGAT
GCAGAGCATATGCAGTGGATTTATTCAGAGGCTTTAAAGAGAGCAGAGCTTTTCGGTATT
TCTGGTGTTACATATTCTTTGACACAGGGTGTTGTCAAAAATATAATCCCAGCCATTGCA
TCAACGAATGCAATTATATCGGCTGCTTGTGCATTGGAAGCCTTAAAGCTTATTTCTGGG
TGCAGCAAAAGTGTGTCAAACTATCTCACGTACAACGGTCTGGAAGGAACACACATTAAA
GTAACTGAGTTTGTCAGAGACAAAGATTGCCTTGTATGTGGGCCTGGTACCCTTGTTGAG
CTGGATACGTCATCTACTCTTTCAGATTTCATCAAGATGCTTGAAGAGCACCCCAAGTTG
CGGATGTCGAAAGCCAGCGTGACGCACGAAGGTAACAACCTGTACATGCAGTCACCGGAG
GTGCTGGAGCAGATGACACGGCCAAACCTGAGCATCCCCATGTTTGAGCTTCTCAAAGAG
GTCCCATACACCACTGTCCATGCCACGGGCATGGCAGAGAACAACGGGAAAAAAGTGTCC
TCGTTGAGGAAGCTCCGTGTGGCCTTCAAGGGCATCGAAGACGCCTCCAAGATGGATACG
ACCGTGAGCTCATGA

Peptide Sequence

PEP ID

Zm00001d008256_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:8:3193765:3222167:1 gene:Zm00001d008256 transcript:Zm00001d008256_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:NEDD8-activating enzyme E1 catalytic subunit
Sequence

MERVNGVNIVPHFCRIEDKEIEFYSQFHIIVLGLDSIEARSYINSVACGFLDYDSSDNPL
QETVKPMVDGGTEGFKGHARVIIPGTTPCFECNIWLFPPQVKFPLCTLAETPRTAAHCIE
YAHLIKWDEVHPGKPFDGDDAEHMQWIYSEALKRAELFGISGVTYSLTQGVVKNIIPAIA
STNAIISAACALEALKLISGCSKSVSNYLTYNGLEGTHIKVTEFVRDKDCLVCGPGTLVE
LDTSSTLSDFIKMLEEHPKLRMSKASVTHEGNNLYMQSPEVLEQMTRPNLSIPMFELLKE
VPYTTVHATGMAENNGKKVSSLRKLRVAFKGIEDASKMDTTVSS

Transcript Sequence

Transcript ID

Zm00001d008256_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:3193765:3222167:1 gene:Zm00001d008256 gene_biotype:protein_coding transcript_biotype:protein_coding description:NEDD8-activating enzyme E1 catalytic subunit
Sequence

GCTGCTCGGTGGTCGGTGCCCAGGTGCGCCGATTATCTCCATCAAAGCCGCGCATCCCGC
TGCCCCCTTACTCATCCTCCCCGCTGCTCGAAGGAGAGCCAAATCCAGAGCGCCGCCGCG
ATGGCCTCCCCTGACGCGGAACAGCCGGCGCCGACGGAACTCGAGCGGTGGCGTGACCTC
GACATGCTCTTGTCCCGCCCTGGAAACCTCGTGGAGGCCACTTTCGATCCCAGCCCCGGC
CTGCGAGACCTACTGGGGAGCCTCGTGGAGGTTTTGGTTGTGGGCGCGGGCGGGCTTGGC
TGCGAGCTCCTCAAGGACCTGGCTCTCTCCGGGTTTAAGAAACTGCACGTCATTGATATG
GACACCATAGACGTCTCCAACCTCAATCGCCAGTTTCTCTTCAGTTCAAGATGTTGGGAA
GTCCAAGGCTGAAGTAGCAGCGAAGAGGGTTATGGAGCGAGTTAATGGGGTGAACATAGT
TCCTCATTTTTGCAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAGTTCCACATAAT
TGTCCTAGGTCTGGATTCAATTGAAGCTCGAAGCTACATCAATTCTGTGGCTTGTGGTTT
CTTAGATTATGACTCAAGTGACAATCCACTCCAAGAGACGGTTAAACCTATGGTAGATGG
TGGAACTGAGGGCTTCAAGGGACACGCTAGAGTCATTATACCTGGAACAACACCTTGCTT
TGAATGCAACATATGGCTTTTTCCTCCACAGGTTAAGTTCCCTTTATGTACTCTCGCCGA
GACACCAAGAACTGCAGCTCACTGCATTGAGTATGCTCACTTGATCAAATGGGATGAGGT
TCATCCTGGAAAACCTTTTGATGGCGATGATGCAGAGCATATGCAGTGGATTTATTCAGA
GGCTTTAAAGAGAGCAGAGCTTTTCGGTATTTCTGGTGTTACATATTCTTTGACACAGGG
TGTTGTCAAAAATATAATCCCAGCCATTGCATCAACGAATGCAATTATATCGGCTGCTTG
TGCATTGGAAGCCTTAAAGCTTATTTCTGGGTGCAGCAAAAGTGTGTCAAACTATCTCAC
GTACAACGGTCTGGAAGGAACACACATTAAAGTAACTGAGTTTGTCAGAGACAAAGATTG
CCTTGTATGTGGGCCTGGTACCCTTGTTGAGCTGGATACGTCATCTACTCTTTCAGATTT
CATCAAGATGCTTGAAGAGCACCCCAAGTTGCGGATGTCGAAAGCCAGCGTGACGCACGA
AGGTAACAACCTGTACATGCAGTCACCGGAGGTGCTGGAGCAGATGACACGGCCAAACCT
GAGCATCCCCATGTTTGAGCTTCTCAAAGAGGTCCCATACACCACTGTCCATGCCACGGG
CATGGCAGAGAACAACGGGAAAAAAGTGTCCTCGTTGAGGAAGCTCCGTGTGGCCTTCAA
GGGCATCGAAGACGCCTCCAAGATGGATACGACCGTGAGCTCATGATGCCGGTCGTCGTC
GTCTTGTTGCTAATTTCAAGTCTCCCAGGAAAGATGAGGATTAACCCAATGTTTTTGGAC
AGGTTAAGTGTAGTTTTCGAGCGCCATATTACAAATTGAAATGTGCGCCTGATACTGTTC
AAACATGAAGAAATTTATCGTAGATGATACTATGGTTTTGTGAGAATCTACTTCTTGGTG
TTTCGAATCTTGCTCGACAAGTAAATTAAATTTATTGTGCGTATTCTGAGTTTTGGAGCG
TGTACGCGGTGGAGAATGTAAGATTTATACTAGTTCGG