Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008238_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:2256303:2260962:1 gene:Zm00001d008238 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine biosynthesis protein hisIE

Sequence

ATGGCGGCGGCCGCACCAACACACGCGCCCGTGTCCTCCTCAGCGTGCCGCGCGGGATTC
TCCTCTAGCGGTGTATCCTTCCCCAATTTTCGCTCGGCAGCGGCTTCGGCCCCTGGGTGG
CGGCGCAGGGAGCCGTACCCGGCAGTCTCCGTAGTGTCGAGCTCCCCGCAGTCTGTGGCA
GGAGCTATAACCGTCGACACCGAGGTTGACACATTGCTAGACAGTGTGAAGTGGGACAGC
AAAGGGTTGGCTGTTGCCATTGCACAAAATGTGGATACTGGAGCCATTCTTATGCAGGGT
TTTGCTAATAAAGAAGCCCTTGCAAAAACTATATCAACCAGGAAAGCCACATTCTTTAGC
CGTTCACGGTCTTCCTTGTGGACGAAAGGGGAGACATCCATGAACTTCATTAATGTGCAT
GACATTTTCCTAGACTGTGACCATGACTCTATAATATACCTTGGAAAGCCAGATGGACCT
ACCTGCCATACAGGAGCAGAAACGTGTTATTATACTTCAGTTTATGATGCTCTACAAAGT
TCAAAGCCCAATGAAGGCAGGCAGGTTATGACAACCCTATACTCACTTGAAGATACAATT
AGTAGACGCCACGAGGAGAAAGTTACTGATGGAGGTGGCAAGCCATCATGGACGAAAAAG
CTACTCCTTGATAACCAGCTACTTTGCTCGAAAATACGTGAAGAAGCTGGTGAGCTAATT
CAAACGCTGCTTGAGAACGAGGACCAATCTCGTGCAGCTTCGGAGATGGCTGATCTGCTG
TACCACGCTATGGTGCTGCTCAGAGTCAAGGATGTAAAGATGGAACAAGTCCTTGAGGTC
CTGAGGAAGAGATTTTCGCAGTCTGGTATCGAGGAGAAGGCCAGTCGCAATAAATCTTAG

Peptide Sequence

PEP ID

Zm00001d008238_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:2256303:2260962:1 gene:Zm00001d008238 transcript:Zm00001d008238_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine biosynthesis protein hisIE

Sequence

MAAAAPTHAPVSSSACRAGFSSSGVSFPNFRSAAASAPGWRRREPYPAVSVVSSSPQSVA
GAITVDTEVDTLLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATFFS
RSRSSLWTKGETSMNFINVHDIFLDCDHDSIIYLGKPDGPTCHTGAETCYYTSVYDALQS
SKPNEGRQVMTTLYSLEDTISRRHEEKVTDGGGKPSWTKKLLLDNQLLCSKIREEAGELI
QTLLENEDQSRAASEMADLLYHAMVLLRVKDVKMEQVLEVLRKRFSQSGIEEKASRNKS

Transcript Sequence

Transcript ID

Zm00001d008238_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:2256303:2260962:1 gene:Zm00001d008238 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine biosynthesis protein hisIE

Sequence

GACCAGGTCACGTCACGAGGAGCGGAACACACACACTCGGGGTTCCGATGGCGGCGGCCG
CACCAACACACGCGCCCGTGTCCTCCTCAGCGTGCCGCGCGGGATTCTCCTCTAGCGGTG
TATCCTTCCCCAATTTTCGCTCGGCAGCGGCTTCGGCCCCTGGGTGGCGGCGCAGGGAGC
CGTACCCGGCAGTCTCCGTAGTGTCGAGCTCCCCGCAGTCTGTGGCAGGAGCTATAACCG
TCGACACCGAGGTTGACACATTGCTAGACAGTGTGAAGTGGGACAGCAAAGGGTTGGCTG
TTGCCATTGCACAAAATGTGGATACTGGAGCCATTCTTATGCAGGGTTTTGCTAATAAAG
AAGCCCTTGCAAAAACTATATCAACCAGGAAAGCCACATTCTTTAGCCGTTCACGGTCTT
CCTTGTGGACGAAAGGGGAGACATCCATGAACTTCATTAATGTGCATGACATTTTCCTAG
ACTGTGACCATGACTCTATAATATACCTTGGAAAGCCAGATGGACCTACCTGCCATACAG
GAGCAGAAACGTGTTATTATACTTCAGTTTATGATGCTCTACAAAGTTCAAAGCCCAATG
AAGGCAGGCAGGTTATGACAACCCTATACTCACTTGAAGATACAATTAGTAGACGCCACG
AGGAGAAAGTTACTGATGGAGGTGGCAAGCCATCATGGACGAAAAAGCTACTCCTTGATA
ACCAGCTACTTTGCTCGAAAATACGTGAAGAAGCTGGTGAGCTAATTCAAACGCTGCTTG
AGAACGAGGACCAATCTCGTGCAGCTTCGGAGATGGCTGATCTGCTGTACCACGCTATGG
TGCTGCTCAGAGTCAAGGATGTAAAGATGGAACAAGTCCTTGAGGTCCTGAGGAAGAGAT
TTTCGCAGTCTGGTATCGAGGAGAAGGCCAGTCGCAATAAATCTTAGCGTGATTGGTTAA
TAATGCCTTGATGGTGGATGACTCTGATTTGCTATCGGTGCGGAATGTGCACTATTGAAG
AATTTTGTGTTTGATGGATCAGTTGTGTTTTTGTTTTCTCCGACAAGACATCTATGAAAT
ATGTGGCAGGTGTCAATAAAGTTATCTCATACAGCAGACCGTTTACTCATTGAGCTCGGC
TAGTCTCCGTGTGTGTTTTATGCACAACTTTTTAACATATCTTTTACAATATGGTTGCTT
GACTTTAATCTATATC