Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008228_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:8:1976472:1977821:1 gene:Zm00001d008228 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:50S ribosomal protein L40 description:50S ribosomal protein 5 chloroplastic
Sequence

ATGCCACACCCACCCATGGCGCTCCTCCTCTCCCCGACCGTTTCCTTCCTGGTCTCCCCG
TCTGCTCCACGCCCTCGAGCTCTCTCCGCTGCCGCCAATGTATCCTACCCCGCCTCAAGG
CTGCAATGCAAGAACCTGTCCTCCCAACAGAGCCCTCTGAATGTGACTGCTACTTGTGCT
TCTTTCGCTGAGAAGAGGCTGGTTCTTGTCCATGCCACGGCAGAGGGTTCTGAGGCTGGT
GCGGAGCAGCCAGAAGAGCCGAAACCAGCGACCAAGATCGAGGAAATGCCACTCGAGTCG
AAGCAGAAGATGATCATGGAGCAAAGAGCGCGGATGAAGCTTGCCAAGAAACTGAGGCAG
CGGCGCAAGCGGCTTCTCCGCAAGAGGAAGCTTAGGAAGAAGGGCAGGTGGCCACCGTCC
AAGATGAAGAAGCTCAAGAATGTATGA

Peptide Sequence

PEP ID

Zm00001d008228_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:8:1976472:1977821:1 gene:Zm00001d008228 transcript:Zm00001d008228_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:50S ribosomal protein L40 description:50S ribosomal protein 5 chloroplastic
Sequence

MPHPPMALLLSPTVSFLVSPSAPRPRALSAAANVSYPASRLQCKNLSSQQSPLNVTATCA
SFAEKRLVLVHATAEGSEAGAEQPEEPKPATKIEEMPLESKQKMIMEQRARMKLAKKLRQ
RRKRLLRKRKLRKKGRWPPSKMKKLKNV

Transcript Sequence

Transcript ID

Zm00001d008228_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:1976472:1977821:1 gene:Zm00001d008228 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:50S ribosomal protein L40 description:50S ribosomal protein 5 chloroplastic
Sequence

AGCAAGGCAAAGAATGCCACACCCACCCATGGCGCTCCTCCTCTCCCCGACCGTTTCCTT
CCTGGTCTCCCCGTCTGCTCCACGCCCTCGAGCTCTCTCCGCTGCCGCCAATGTATCCTA
CCCCGCCTCAAGGCTGCAATGCAAGAACCTGTCCTCCCAACAGAGCCCTCTGAATGTGAC
TGCTACTTGTGCTTCTTTCGCTGAGAAGAGGCTGGTTCTTGTCCATGCCACGGCAGAGGG
TTCTGAGGCTGGTGCGGAGCAGCCAGAAGAGCCGAAACCAGCGACCAAGATCGAGGAAAT
GCCACTCGAGTCGAAGCAGAAGATGATCATGGAGCAAAGAGCGCGGATGAAGCTTGCCAA
GAAACTGAGGCAGCGGCGCAAGCGGCTTCTCCGCAAGAGGAAGCTTAGGAAGAAGGGCAG
GTGGCCACCGTCCAAGATGAAGAAGCTCAAGAATGTATGAACAACGTCAACGTTGACTGC
CACTCTGCCTTGGTTTTATGTGTTGTGATTGTGATTGCCCAGCTTACGAATTTTGCTGTT
CAGAATCTGAGACACGGTACCTACAAAATGTAACTCTGTTTTCACGTAATTTGAATCTTC
TTACAGTCTAGCGTGCTCGTTGTGTCTGAATTTTCT