Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008218_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:8:1586628:1591444:1 gene:Zm00001d008218 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta

Sequence

ATGGTGGGTGTGGTGATGGACGTGCTTCGTGCACTGGCCAGCCCCAATTTAGATGTCAAG
AGAAAGGTTCTCGATTTAGTTCTCGATTTGCTCACCCCGCGTAATGTTGAGGAGGTGGTG
CTTTATCTCAAGAAGGAGGTGGTCAAGACGCAGGCTGGAGACCTCGAGAAGGGTGGCGAG
TACCGCCAGATGCTGGTGCAGGCCATCCATGCTTGCGCTGTTGAGTACCCAGAGGTGGCT
GGATCTGTAGTGCACCTCCTCATGGACTTTCTTGGTGATACCAATGTTGCTGCAGCTGTT
GATGTTGTGCTGTTTGTACGTGAGATCATTGAGACCAATCCGAAGCTGCGTGTTTCCATG
ATCCAGAGGCTTATTGATACATTCTATCAGATTCGGGCATCCCGTGTCTGCTCATGTGCT
CTCTGGATCCTTGGGGAGTACTCCCTCTCTCTATCAGAGGTTGAAAGCACCATTGCTACC
ATTAAACAATGTCTTGGTGATCTGCCATTCTACACTGTCTCTGATGAAGGGGAGGTAACT
GATTCCACCAATTCAGCCCAGGCGGTGGTGAACACTGTCACTGTATCTTCCAGGAGGCCT
GTTGTTCTTGCGGATGGCACTTATGCCACACAGAGCGCCGCTACCGAGACCATTTCAGCC
CCATCAGTTGCTCATGGGTCATTAGCATCTACCCTGAACCTCAGATCACTCATTTTGTCA
GGTGATTTCTTCCTGGCTGCTGTTGTTGCATGTACCCTGACCAAGCTTGTGTTGAGGCTG
GAAGAAGTGCAGCCATCCAAGGTTGAATCAAACAAAGCTTGCACTGGAGCATTGCTGATC
ATGACATCGATTCTGCAGCTGGGCCAGTCTTCTTACCTTCCCCACCCGATTGATAATGAT
TCATATGACAGAATTGTGCTGTGTTTGAGATTGCTTTGCAATACTGGTGATGATGTCAGG
AAGATTTGGTTGCATTCATGCAGACAGAGCTTTGCGAAAATGCTTGCTGAGAAGCAGTTC
AGGGAGACAGAGGAGATGAAGGCAAAGGCACAGATCTCTCATGCCCAGCCAGATGATCTT
ATTGATTTTTACCACCTGAAGAGCAGGAAGGGCATGAGCCAGCTTGAGTTGGAAGATGAG
GTGCACGATGATTTGAAGGCTGCAACTGGTGGGTTTACTAAGGATGCAGATGATGCAAAC
AAGCTCAACCGCATTCTTCAGTTGACTGGGTTCAGCGATCCTGTGTATGCTGAAGCATTT
GTAACAGTTCACCATTATGACATTGTACTTGATGTTACTGTCATTAACCGCACAAAGGAG
ACACTTCAGAACTTGTGCTTGGAATTGGCTACAATGGGAGACCTCAAACTTGTTGATCGC
CCTCAGAACTACACCTTGGCTCCTGAGTCTAGCAAACAGATCCGTGCTAATATCAAGGTT
TCATCAACAGAGACGGGGGTTATATTTGGCAACATAGTTTACGAGACTTCAAATGTGATG
GAACGATCAGTGGTTGTCCTAAATGATATTCACATCGACATCATGGATTACATCTCACCT
GCTACGTGTGCAGATGTTACTTTCCGGAACATGTGGGCAGAATTTGAATGGGAAAATAAG
GTGGCTGTGAATACTGTGATTCAGGATGAGAAGGAATTCTTGAATCACATTATCAAGTCA
ACGAACATGAAATGTCTGACACCACCGTCTGCACTGGATGGGGAATGTGGTTTCCTTGCT
GCTAACCTTTATGCAAAGAGTGTGTTTGGCGAGGACGCTTTGGTGAACATCAGCATTGAG
AAGCAACATGACGGCAAGCTCAGTGGCTACATTCGAATAAGGAGCAAGACCCAGGGAATT
GCACTCAGCTTAGGGGACAAGATCACTCTCAAGCAGAAAGGTGGCAGTTAA

Peptide Sequence

PEP ID

Zm00001d008218_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:8:1586628:1591444:1 gene:Zm00001d008218 transcript:Zm00001d008218_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta

Sequence

MVGVVMDVLRALASPNLDVKRKVLDLVLDLLTPRNVEEVVLYLKKEVVKTQAGDLEKGGE
YRQMLVQAIHACAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLFVREIIETNPKLRVSM
IQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESTIATIKQCLGDLPFYTVSDEGEVT
DSTNSAQAVVNTVTVSSRRPVVLADGTYATQSAATETISAPSVAHGSLASTLNLRSLILS
GDFFLAAVVACTLTKLVLRLEEVQPSKVESNKACTGALLIMTSILQLGQSSYLPHPIDND
SYDRIVLCLRLLCNTGDDVRKIWLHSCRQSFAKMLAEKQFRETEEMKAKAQISHAQPDDL
IDFYHLKSRKGMSQLELEDEVHDDLKAATGGFTKDADDANKLNRILQLTGFSDPVYAEAF
VTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNYTLAPESSKQIRANIKV
SSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCADVTFRNMWAEFEWENK
VAVNTVIQDEKEFLNHIIKSTNMKCLTPPSALDGECGFLAANLYAKSVFGEDALVNISIE
KQHDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

Transcript Sequence

Transcript ID

Zm00001d008218_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:1586628:1591444:1 gene:Zm00001d008218 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta

Sequence

GGATGTCATGGTGGGTGTGGTGATGGACGTGCTTCGTGCACTGGCCAGCCCCAATTTAGA
TGTCAAGAGAAAGGTTCTCGATTTAGTTCTCGATTTGCTCACCCCGCGTAATGTTGAGGA
GGTGGTGCTTTATCTCAAGAAGGAGGTGGTCAAGACGCAGGCTGGAGACCTCGAGAAGGG
TGGCGAGTACCGCCAGATGCTGGTGCAGGCCATCCATGCTTGCGCTGTTGAGTACCCAGA
GGTGGCTGGATCTGTAGTGCACCTCCTCATGGACTTTCTTGGTGATACCAATGTTGCTGC
AGCTGTTGATGTTGTGCTGTTTGTACGTGAGATCATTGAGACCAATCCGAAGCTGCGTGT
TTCCATGATCCAGAGGCTTATTGATACATTCTATCAGATTCGGGCATCCCGTGTCTGCTC
ATGTGCTCTCTGGATCCTTGGGGAGTACTCCCTCTCTCTATCAGAGGTTGAAAGCACCAT
TGCTACCATTAAACAATGTCTTGGTGATCTGCCATTCTACACTGTCTCTGATGAAGGGGA
GGTAACTGATTCCACCAATTCAGCCCAGGCGGTGGTGAACACTGTCACTGTATCTTCCAG
GAGGCCTGTTGTTCTTGCGGATGGCACTTATGCCACACAGAGCGCCGCTACCGAGACCAT
TTCAGCCCCATCAGTTGCTCATGGGTCATTAGCATCTACCCTGAACCTCAGATCACTCAT
TTTGTCAGGTGATTTCTTCCTGGCTGCTGTTGTTGCATGTACCCTGACCAAGCTTGTGTT
GAGGCTGGAAGAAGTGCAGCCATCCAAGGTTGAATCAAACAAAGCTTGCACTGGAGCATT
GCTGATCATGACATCGATTCTGCAGCTGGGCCAGTCTTCTTACCTTCCCCACCCGATTGA
TAATGATTCATATGACAGAATTGTGCTGTGTTTGAGATTGCTTTGCAATACTGGTGATGA
TGTCAGGAAGATTTGGTTGCATTCATGCAGACAGAGCTTTGCGAAAATGCTTGCTGAGAA
GCAGTTCAGGGAGACAGAGGAGATGAAGGCAAAGGCACAGATCTCTCATGCCCAGCCAGA
TGATCTTATTGATTTTTACCACCTGAAGAGCAGGAAGGGCATGAGCCAGCTTGAGTTGGA
AGATGAGGTGCACGATGATTTGAAGGCTGCAACTGGTGGGTTTACTAAGGATGCAGATGA
TGCAAACAAGCTCAACCGCATTCTTCAGTTGACTGGGTTCAGCGATCCTGTGTATGCTGA
AGCATTTGTAACAGTTCACCATTATGACATTGTACTTGATGTTACTGTCATTAACCGCAC
AAAGGAGACACTTCAGAACTTGTGCTTGGAATTGGCTACAATGGGAGACCTCAAACTTGT
TGATCGCCCTCAGAACTACACCTTGGCTCCTGAGTCTAGCAAACAGATCCGTGCTAATAT
CAAGGTTTCATCAACAGAGACGGGGGTTATATTTGGCAACATAGTTTACGAGACTTCAAA
TGTGATGGAACGATCAGTGGTTGTCCTAAATGATATTCACATCGACATCATGGATTACAT
CTCACCTGCTACGTGTGCAGATGTTACTTTCCGGAACATGTGGGCAGAATTTGAATGGGA
AAATAAGGTGGCTGTGAATACTGTGATTCAGGATGAGAAGGAATTCTTGAATCACATTAT
CAAGTCAACGAACATGAAATGTCTGACACCACCGTCTGCACTGGATGGGGAATGTGGTTT
CCTTGCTGCTAACCTTTATGCAAAGAGTGTGTTTGGCGAGGACGCTTTGGTGAACATCAG
CATTGAGAAGCAACATGACGGCAAGCTCAGTGGCTACATTCGAATAAGGAGCAAGACCCA
GGGAATTGCACTCAGCTTAGGGGACAAGATCACTCTCAAGCAGAAAGGTGGCAGTTAACT
GTGACAAGTAATCGCAGTTGTATCATCATTTTTCGCATTTAGGAAATCCACGTGCCAGAG
AGAGACCAGTGCCGTGGCATTGAACTGAGTATAAATGCTTTTTTGTACAAAAGGATCGAT
CAAGGAGAGAGATAAGAGGACAGTTATGAGGAAGTCACGAAGTTGTCGGTCGAAGATATA
TGTTGCTGTAGTAACGAAGCTGTTCCAAACTTCCTTGAAATAGTTGTGAAGTTTATGTTG
ATTTCTCGACAGGTAGTTCAATTGTGATCTTGTACTACTATTATGAATCCCTCTTGTTTT
AATGTTTTATTTGCCTTTATTTTAGTTGTCTGGACTTGGAAACAGAA