Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008203_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:8:1020583:1026536:-1 gene:Zm00001d008203 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protoporphyrinogen IX oxidase1 description: protoporphyrinogen IX oxidase1
Sequence	ATGGTCGCCGCCACCGCCACCGCCACCGCCATGGCCACCGCTGCATCGCCGCTACTCAAC GGGACCCGAATACCTGCGCGGCTCCGCCATCGAGGACTCAGCGTGCGCTGCGCTGCTGTG GCGGGCGGCGCGGCCGAGGCACCGGCTTCCACCGGCGCGCGGCTGTCCGCGGACTGCGTC GTGGTGGGCGGAGGCATCAGTGGCCTCTGCACCGCGCAGGCGCTGGCCACGCGGCACGGC GTCGGGGACGTGCTTGTCACGGAGGCCCGCGCCCGCCCCGGCGGCAACATTACCACCGTC GAGCGCCCCGAGGTGGACAGCGGACTGAAGGATGACTTGGTTTTTGGGGACCCAAACGCG CCGCGTTTCGTGCTGTGGGAGGGGAAGCTGAGGCCCGTGCCATCCAAGCCCGCCGACCTC CCGTTCTTCGATCTCATGAGCATCCCAGGGAAGCTCAGGGCCGGTCTAGGCGCGCTTGGC ATCCGCCCGCCTCCTCCAGGCCGCGAAGAGTCAGTGGAGGAGTTCGTGCGCCGCAACCTC GGTGCTGAGGTCTTTGAGCGCCTCATTGAGCCTTTCTGCTCAGGTGTCTATGCTGGTGAT CCTTCTAAGCTCAGCATGAAGGCTGCATTTGGGAAGGTTTGGCGGTTGGAAGAAACTGGA GGTAGTATTATTGGTGGAACCATCAAGACAATTCAGGAGAGGAGCAAGAATCCAAAACCA CCGAGGGATGCCCGCCTTCCGAAGCCAAAAGGGCAGACAGTTGCATCTTTCAGGAAGGGT CTTGCCATGCTTCCAAATGCCATTACATCCAGCTTGGGTAGTAAAGTCAAACTATCATGG AAACTCACGAGCATTACAAAATCAGATGACAAGGGATATGTTTTGGAGTATGAAACGCCA GAAGGGGTTGTTTCGGTGCAGGCTAAAAGTGTTATCATGACTATTCCATCATATGTTGCT AGCAACATTTTGCGTCCACTTTCAAGCGATGCTGCAGATGCTCTATCAAGATTCTATTAT CCACCGGTTGCTGCTGTAACTGTTTCGTATCCAAAGGAAGCAATTAGAAAAGAATGCTTA ATTGATGGGGAACTCCAGGGCTTTGGCCAGTTGCATCCACGTAGTCAAGGAGTTGAGACA TTAGGAACAATATACAGTTCCTCACTCTTTCCAAATCGTGCTCCTGACGGTAGGGTGTTA CTTCTAAACTACATAGGAGGTGCTACAAACACAGGAATTGTTTCCAAGACTGAAAGTGAG CTGGTCGAAGCAGTTGACCGTGACCTCCGAAAAATGCTTATAAATTCTACAGCAGTGGAC CCTTTAGTCCTTGGTGTTCGAGTTTGGCCACAAGCCATACCTCAGTTCCTGGTAGGACAT CTTGATCTTCTGGAAGCCGCAAAAGCTGCCCTGGACCGAGGTGGCTACGATGGGCTGTTC CTAGGAGGGAACTATGTTGCAGGAGTTGCCCTGGGCAGATGCGTTGAGGGCGCGTATGAA AGTGCCTCGCAAATATCTGACTTCTTGACCAAGTATGCCTACAAGTGA

Peptide Sequence

PEP ID	Zm00001d008203_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:8:1020583:1026536:-1 gene:Zm00001d008203 transcript:Zm00001d008203_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protoporphyrinogen IX oxidase1 description: protoporphyrinogen IX oxidase1
Sequence	MVAATATATAMATAASPLLNGTRIPARLRHRGLSVRCAAVAGGAAEAPASTGARLSADCV VVGGGISGLCTAQALATRHGVGDVLVTEARARPGGNITTVERPEVDSGLKDDLVFGDPNA PRFVLWEGKLRPVPSKPADLPFFDLMSIPGKLRAGLGALGIRPPPPGREESVEEFVRRNL GAEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWRLEETGGSIIGGTIKTIQERSKNPKP PRDARLPKPKGQTVASFRKGLAMLPNAITSSLGSKVKLSWKLTSITKSDDKGYVLEYETP EGVVSVQAKSVIMTIPSYVASNILRPLSSDAADALSRFYYPPVAAVTVSYPKEAIRKECL IDGELQGFGQLHPRSQGVETLGTIYSSSLFPNRAPDGRVLLLNYIGGATNTGIVSKTESE LVEAVDRDLRKMLINSTAVDPLVLGVRVWPQAIPQFLVGHLDLLEAAKAALDRGGYDGLF LGGNYVAGVALGRCVEGAYESASQISDFLTKYAYK

Transcript Sequence

Transcript ID	Zm00001d008203_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:1020583:1026536:-1 gene:Zm00001d008203 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protoporphyrinogen IX oxidase1 description: protoporphyrinogen IX oxidase1
Sequence	AACGCCGCCGGAAATGGTCGCCGCCACCGCCACCGCCACCGCCATGGCCACCGCTGCATC GCCGCTACTCAACGGGACCCGAATACCTGCGCGGCTCCGCCATCGAGGACTCAGCGTGCG CTGCGCTGCTGTGGCGGGCGGCGCGGCCGAGGCACCGGCTTCCACCGGCGCGCGGCTGTC CGCGGACTGCGTCGTGGTGGGCGGAGGCATCAGTGGCCTCTGCACCGCGCAGGCGCTGGC CACGCGGCACGGCGTCGGGGACGTGCTTGTCACGGAGGCCCGCGCCCGCCCCGGCGGCAA CATTACCACCGTCGAGCGCCCCGAGGTGGACAGCGGACTGAAGGATGACTTGGTTTTTGG GGACCCAAACGCGCCGCGTTTCGTGCTGTGGGAGGGGAAGCTGAGGCCCGTGCCATCCAA GCCCGCCGACCTCCCGTTCTTCGATCTCATGAGCATCCCAGGGAAGCTCAGGGCCGGTCT AGGCGCGCTTGGCATCCGCCCGCCTCCTCCAGGCCGCGAAGAGTCAGTGGAGGAGTTCGT GCGCCGCAACCTCGGTGCTGAGGTCTTTGAGCGCCTCATTGAGCCTTTCTGCTCAGGTGT CTATGCTGGTGATCCTTCTAAGCTCAGCATGAAGGCTGCATTTGGGAAGGTTTGGCGGTT GGAAGAAACTGGAGGTAGTATTATTGGTGGAACCATCAAGACAATTCAGGAGAGGAGCAA GAATCCAAAACCACCGAGGGATGCCCGCCTTCCGAAGCCAAAAGGGCAGACAGTTGCATC TTTCAGGAAGGGTCTTGCCATGCTTCCAAATGCCATTACATCCAGCTTGGGTAGTAAAGT CAAACTATCATGGAAACTCACGAGCATTACAAAATCAGATGACAAGGGATATGTTTTGGA GTATGAAACGCCAGAAGGGGTTGTTTCGGTGCAGGCTAAAAGTGTTATCATGACTATTCC ATCATATGTTGCTAGCAACATTTTGCGTCCACTTTCAAGCGATGCTGCAGATGCTCTATC AAGATTCTATTATCCACCGGTTGCTGCTGTAACTGTTTCGTATCCAAAGGAAGCAATTAG AAAAGAATGCTTAATTGATGGGGAACTCCAGGGCTTTGGCCAGTTGCATCCACGTAGTCA AGGAGTTGAGACATTAGGAACAATATACAGTTCCTCACTCTTTCCAAATCGTGCTCCTGA CGGTAGGGTGTTACTTCTAAACTACATAGGAGGTGCTACAAACACAGGAATTGTTTCCAA GACTGAAAGTGAGCTGGTCGAAGCAGTTGACCGTGACCTCCGAAAAATGCTTATAAATTC TACAGCAGTGGACCCTTTAGTCCTTGGTGTTCGAGTTTGGCCACAAGCCATACCTCAGTT CCTGGTAGGACATCTTGATCTTCTGGAAGCCGCAAAAGCTGCCCTGGACCGAGGTGGCTA CGATGGGCTGTTCCTAGGAGGGAACTATGTTGCAGGAGTTGCCCTGGGCAGATGCGTTGA GGGCGCGTATGAAAGTGCCTCGCAAATATCTGACTTCTTGACCAAGTATGCCTACAAGTG ATGAAAGAAGTGGAGCGCTACTTGTTAATCGTTTATGTTGCATAGATGAGGTGCCTCCGG GGAAAAAAAGCTTGAATAGTATTTTTTATTCTTATTTTGTAAATTGCATTTCTGTTCTTT TTTCTATCAGTAATTAGTTATATTTTAGTTCTGTAGGAGATTGTTCTGTTCACTGCCCTT CAAAAGAAATTTTATTTTTCATTCTT