Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d008178_T026
CDS Infomation

cds chromosome:B73_RefGen_v4:8:560412:565003:1 gene:Zm00001d008178 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC transporter B family member 21
Sequence

ATGACAAACAGGACGACAGTCATAGTCGCACACCGTCTGAGCACTGTTCGAAATGCTGAT
ACCATTGCTGTTATTCATCAGGGAACACTGGTTGAAAAAGGTCCACACAGTGAGCTTCTA
AGAGATCCAGAAGGAGCTTATAGCCAACTGATAAGGCTACAGGAAGCAAACCAGCAGAAC
AATGGGAAGGTTGATGCCAATGCTCGTCCAGGCAAACAAATATCAATAAACAAGTCAGCT
AGCAGGAGGTCGTCCCGTGATAACAGTAGCCACCATTCATTCTCAGTCCCATTCGGTATG
CCTCATGGGATTGACATTCAGGATGGTTCATCTAACAAACTGTGTGATGAGATGCCACAG
GAAGTGCCTCTCAGCCGGCTTGCATCTCTCAACAAGGCAGAGATCCCGGTCCTTATACTA
GGCTCCATTGCCTCAGTCATCAGTGGAGTTATCTTCCCGATCTTTGCGATACTCCTGTCA
AATGTGATAAAAGCGTTCTATGAGCCTCCACATCTCCTAAGGAGGGATTCACAGTTCTGG
GCTTCCATGTTCTTGGTGTTTGGTGCAGTGTACTTCTTGTCACTCCCTGTCAGTTCGTAC
CTTTTCTCCATAGCAGGGTGCAGGTTGATTAGAAGGATCCGACTGATGACATTTGAGAAG
GTGGTAAATATGGAGGTCGAGTGGTTTGATCACCCAGAAAACTCAAGTGGAGCAATAGGT
GCAAGGTTGTCAGCTGATGCAGCAAAAGTTAGAGGCCTTGTGGGGGATGCGCTTCAATTG
GTTGTACAAAACTCTTCGACACTAGTTGCTGGTTTGGTTATTGCATTTGTGTCAAACTGG
GAGCTATCCCTCATCATCTTAGCTTTAATACCACTCATTGGCCTAAATGGATGGATCCAG
ATGAAGTTTATTCACGGTTTCAGTGCAGACGCAAAGATGATGTATGAAGAGGCAAGCCAG
GTGGCTAATGATGCAGTAGGCAGCATAAGAACAGTGGCCTCATTCTCAGCTGAAGAGAAG
GTCATGGATTTGTACAAGAAGAAATGTGAAGGTCCTCTAAGAACAGGAATCAGGACAGGG
ATTATAAGTGGAATCGGTTTTGGAGTTTCCTTTTTCTTGCTATTTGGGGTATATGCAGCT
AGCTTTTATGCTGGTGCTCGGCTTGTTGAGGACAGGAAGACAACCTTTCCTAAAGTTTTC
AGGGTTTTCCTAGCTCTTGCAATGGCGGCAATTGGAGTGTCGCAATCAAGTACCCTTACA
TCAGATTCTTCCAAAGCAAAATCAGCTGCATCTTCTATATTTGCAATTGTAGATCGAAAA
TCAAGGATAGACCCAAGTGAGGATGCAGGGGTAACTGTTGAGGCACTACAAGGAAACATC
GTATTCCAGCATGTTAGCTTCAAGTATCCTACCAGGCCAGATGTTCAGATATTCCGGGAC
CTTTGCTTGACAATTCATGCTGGAAAGACTGTTGCACTCGTTGGAGAGAGTGGTAGTGGC
AAATCAACGGCAATTTCATTGCTCCAGAGGTTCTATGACCCAGATGTAGGCCATATACTA
CTAGATGGCGTGGACATACAGAAGTTCCAGCTTAGGTGGTTAAGGCAACAAATGGGCCTG
GTTAGTCAAGAACCAGCTTTGTTTAATGACACAATAAGGGCAAACATTGCCTATGGAAAA
GATGGACAAGCAACAGAATCTGAGATCATATCTGCTGCAGAATTGGCAAATGCTCACAAG
TTTATCAGTTCGGCGCTGCAGGGATATGACACAGTGGTTGGAGAGCGTGGAGCCCAGTTG
TCAGGAGGGCAGAAGCAGCGAGTGGCGATCGCCCGTGCAATTGTGAAGGACCCTAGGATC
CTGCTTCTGGACGAAGCGACTAGTGCGCTGGATGCTGAGTCCGAGCGGATCGTCCAGGAC
GCACTGGACAGGGTGATGGTGAACCGGACAACAGTGATCGTCGCTCACCGTCTGTCAACA
ATACAAAATGCAGATTTGATTGCGGTCGTGAGGAATGGGGTTATCATCGAGAAGGGAAAG
CACGATGCCTTGATCAACATCAAGGATGGCGCCTATGCGTCCCTCGTCGCCCTTCACTCG
GCAGCCTCTTCATAG

Peptide Sequence

PEP ID

Zm00001d008178_P026
PEP Infomation

pep chromosome:B73_RefGen_v4:8:560412:565003:1 gene:Zm00001d008178 transcript:Zm00001d008178_T026 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC transporter B family member 21
Sequence

MTNRTTVIVAHRLSTVRNADTIAVIHQGTLVEKGPHSELLRDPEGAYSQLIRLQEANQQN
NGKVDANARPGKQISINKSASRRSSRDNSSHHSFSVPFGMPHGIDIQDGSSNKLCDEMPQ
EVPLSRLASLNKAEIPVLILGSIASVISGVIFPIFAILLSNVIKAFYEPPHLLRRDSQFW
ASMFLVFGAVYFLSLPVSSYLFSIAGCRLIRRIRLMTFEKVVNMEVEWFDHPENSSGAIG
ARLSADAAKVRGLVGDALQLVVQNSSTLVAGLVIAFVSNWELSLIILALIPLIGLNGWIQ
MKFIHGFSADAKMMYEEASQVANDAVGSIRTVASFSAEEKVMDLYKKKCEGPLRTGIRTG
IISGIGFGVSFFLLFGVYAASFYAGARLVEDRKTTFPKVFRVFLALAMAAIGVSQSSTLT
SDSSKAKSAASSIFAIVDRKSRIDPSEDAGVTVEALQGNIVFQHVSFKYPTRPDVQIFRD
LCLTIHAGKTVALVGESGSGKSTAISLLQRFYDPDVGHILLDGVDIQKFQLRWLRQQMGL
VSQEPALFNDTIRANIAYGKDGQATESEIISAAELANAHKFISSALQGYDTVVGERGAQL
SGGQKQRVAIARAIVKDPRILLLDEATSALDAESERIVQDALDRVMVNRTTVIVAHRLST
IQNADLIAVVRNGVIIEKGKHDALINIKDGAYASLVALHSAASS

Transcript Sequence

Transcript ID

Zm00001d008178_T026
Transcript Infomation

cdna chromosome:B73_RefGen_v4:8:560412:565003:1 gene:Zm00001d008178 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC transporter B family member 21
Sequence

AAAGAAACAGGAGACGTTGTGCCCTTATTCAAATATATAAGAAAAATACAATTTCCATTG
GCTTGGATAATTATGCAGCATGCATTGAGATCTCTTCTTTTTCTGATATTTCACAGGGTT
TTGATACTTCCGTTGGTGAGCATGGGACACAGCTTTCTGGTGGGCAGAAGCAAAGAATTG
CGATTGCAAGGGCTATTCTGAAAGATCCAAGAATCCTACTATTGGATGAAGCTACAAGTG
CTCTGGATGCCGAGTCTGAAAGGATTGTGCAGGAAGCTCTCGACAGGGTCATGACAAACA
GGACGACAGTCATAGTCGCACACCGTCTGAGCACTGTTCGAAATGCTGATACCATTGCTG
TTATTCATCAGGGAACACTGGTTGAAAAAGGTCCACACAGTGAGCTTCTAAGAGATCCAG
AAGGAGCTTATAGCCAACTGATAAGGCTACAGGAAGCAAACCAGCAGAACAATGGGAAGG
TTGATGCCAATGCTCGTCCAGGCAAACAAATATCAATAAACAAGTCAGCTAGCAGGAGGT
CGTCCCGTGATAACAGTAGCCACCATTCATTCTCAGTCCCATTCGGTATGCCTCATGGGA
TTGACATTCAGGATGGTTCATCTAACAAACTGTGTGATGAGATGCCACAGGAAGTGCCTC
TCAGCCGGCTTGCATCTCTCAACAAGGCAGAGATCCCGGTCCTTATACTAGGCTCCATTG
CCTCAGTCATCAGTGGAGTTATCTTCCCGATCTTTGCGATACTCCTGTCAAATGTGATAA
AAGCGTTCTATGAGCCTCCACATCTCCTAAGGAGGGATTCACAGTTCTGGGCTTCCATGT
TCTTGGTGTTTGGTGCAGTGTACTTCTTGTCACTCCCTGTCAGTTCGTACCTTTTCTCCA
TAGCAGGGTGCAGGTTGATTAGAAGGATCCGACTGATGACATTTGAGAAGGTGGTAAATA
TGGAGGTCGAGTGGTTTGATCACCCAGAAAACTCAAGTGGAGCAATAGGTGCAAGGTTGT
CAGCTGATGCAGCAAAAGTTAGAGGCCTTGTGGGGGATGCGCTTCAATTGGTTGTACAAA
ACTCTTCGACACTAGTTGCTGGTTTGGTTATTGCATTTGTGTCAAACTGGGAGCTATCCC
TCATCATCTTAGCTTTAATACCACTCATTGGCCTAAATGGATGGATCCAGATGAAGTTTA
TTCACGGTTTCAGTGCAGACGCAAAGATGATGTATGAAGAGGCAAGCCAGGTGGCTAATG
ATGCAGTAGGCAGCATAAGAACAGTGGCCTCATTCTCAGCTGAAGAGAAGGTCATGGATT
TGTACAAGAAGAAATGTGAAGGTCCTCTAAGAACAGGAATCAGGACAGGGATTATAAGTG
GAATCGGTTTTGGAGTTTCCTTTTTCTTGCTATTTGGGGTATATGCAGCTAGCTTTTATG
CTGGTGCTCGGCTTGTTGAGGACAGGAAGACAACCTTTCCTAAAGTTTTCAGGGTTTTCC
TAGCTCTTGCAATGGCGGCAATTGGAGTGTCGCAATCAAGTACCCTTACATCAGATTCTT
CCAAAGCAAAATCAGCTGCATCTTCTATATTTGCAATTGTAGATCGAAAATCAAGGATAG
ACCCAAGTGAGGATGCAGGGGTAACTGTTGAGGCACTACAAGGAAACATCGTATTCCAGC
ATGTTAGCTTCAAGTATCCTACCAGGCCAGATGTTCAGATATTCCGGGACCTTTGCTTGA
CAATTCATGCTGGAAAGACTGTTGCACTCGTTGGAGAGAGTGGTAGTGGCAAATCAACGG
CAATTTCATTGCTCCAGAGGTTCTATGACCCAGATGTAGGCCATATACTACTAGATGGCG
TGGACATACAGAAGTTCCAGCTTAGGTGGTTAAGGCAACAAATGGGCCTGGTTAGTCAAG
AACCAGCTTTGTTTAATGACACAATAAGGGCAAACATTGCCTATGGAAAAGATGGACAAG
CAACAGAATCTGAGATCATATCTGCTGCAGAATTGGCAAATGCTCACAAGTTTATCAGTT
CGGCGCTGCAGGGATATGACACAGTGGTTGGAGAGCGTGGAGCCCAGTTGTCAGGAGGGC
AGAAGCAGCGAGTGGCGATCGCCCGTGCAATTGTGAAGGACCCTAGGATCCTGCTTCTGG
ACGAAGCGACTAGTGCGCTGGATGCTGAGTCCGAGCGGATCGTCCAGGACGCACTGGACA
GGGTGATGGTGAACCGGACAACAGTGATCGTCGCTCACCGTCTGTCAACAATACAAAATG
CAGATTTGATTGCGGTCGTGAGGAATGGGGTTATCATCGAGAAGGGAAAGCACGATGCCT
TGATCAACATCAAGGATGGCGCCTATGCGTCCCTCGTCGCCCTTCACTCGGCAGCCTCTT
CATAGCAGGTGATGGTATGGGATCCTGCATACGTCTGCTAAGACATATATGAACAGAGCG
AGCTGGCACAACCTGTGTAGCAATCCAGGTGCTAGTCTCTGTTCCTCTATTTGATGGCAT
ACATAATTGCTTATACCTAAGCGGAGAAATGTTACAAATAGCAAGGACCAGATGTAAATG
CAAGGAGCTGGTCCTTAAGATAACTTTTTATAATCTATAAATCTTAATATGTATATGTAG
CTTCGAACATAGAAACCAAATAGATGATGGTTATGCTATAACTCATGATGTTCTTGCTGT
CGTTTCCCCCCTTTATAGCTTATATGCAAGTAATGATAACCCTGCTCAGGAAAGAAAGGG
CAGCTCCCAAACGTTTAATGATAACCATATGGCTGGAAAAACTGAGATGAAATGCTGAAG
AATGGCTTCTGCGGAAGCATAAATTTCATGGCAAAGGCTATCAGGTTGCAACTTCTAAGG
TCTGGCCAAAACAGTATGTTTTTAATGTGAAAAGGGCATACTAAACGGAAACACAAGTTC
TATTTTGTAAAAAAAAACCTCAACTGAAGGGGCGGGCATCCTGATCAACTGACTCTGAAA
CGAAGTAACTAGTAATCCAAGTGATTTCCATTTGGCTGACGGGGCTCGTTCGGTTGCGCA
TGGATTAGAGAAGGATTAAATCCCTTCCGATTTAATTTTAACTAAAAAGAGATTTAATCC
TCTGTTGCAATTCCTGTAATCCCCTTCAAACTGAACCAGGCCTGACGGGGAAGTGTACAA
TATTTTTTTTTTCACGCTGACAACCAAACTGTACACACGTGTTTCTGCTCTTGCAAAAGA
GCGAGCACATGAGTTAATTTCTGGCAAGATTTACTGAAACCTATGAGGAAAAAAATATAT
CGTACCCCTCCCAATTTGCATTTTCTAGAAACTAGAAAAGCGGAGAACTAATTTGGCAAT
AGCACTAGCGACTTTGGCTATCAACAATAATCAGTAGGAGAAAAGACGGGGGAATTTGTG
AAGCAGTAAAACGGAAAAACTAGACACGATTGCTTAAGCTTCATCGGATCAGAGCTCACC
TGAAGTCCCGAACCATGGTTTCTGCTCGTTAATAAAGGATGAACGCGGCAGGGATTGTCT
CCGATGTCCCTTCCTATTTTTGTTTCCCCCATCAACAGCTCGCGGCCGATGGCAGGCGTC
CGCGCCAACGGGGGCGGTACCGGTGCTGCGAGCAGCACGGCTCTTCCTCGAATTATGGAA
TCACAGGCGAAAACCTAGTAACAAAGCTCAAGGCAGAACGAACCTCGTCGACGGCGCGGC
TAGGTTGTGACCGCCAGATCTTAGCGCCGGAGGCCGCCATCCGATCACCGGTGCCCAGTT
CTCCGGATGTCCGGATAGAACCTGACCTGAAGAAGAACAGCGCGCGGCGTTTCGCGGATC
TCTGTCTCCCTCTCCCGTGCACAACGGGCATAGATAGATGGAGTTCGGAGGGGAGAAATT
TGTGCTGGTGCCGAGGGGCGTTGACATTGTCCGCCTTGTTTGATCGAGATGGCGGAGTTG
TTTTGACTTTTGTGGAAACGGATTCGGTGGGTTGGAGTTGCAACCGGCGATGGC