Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d008171_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:8:77622:80307:1 gene:Zm00001d008171 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 49
Sequence	ATGGGAGCCGGGGCTGAGGTCATGCATCAGGTCGTGCCGCTGCTGGAGCCGCCGCTCCAC CGGTGCGTCGTTAAGAGCGTCGATGTCATGGAGGAGGTGGTTGCCGTGGCGCCTGGGCAG GTGCAGCCAGCGACGTCGCCGAAGGCGCTGTTGGAGGTTGCCGTAGAGGTGCCCGATCTG GAGTTGAAGAGATCTTCTAATGCTGGGAGTAGTGTATCTGCAGAACAACTGCAGTTTGTC CCTATCATTCGATCTGGTAGCTTTGCTGATATTGGACCTAGGCGGTTCATGGAAGATGAG CATATTAGAATTGATGATCTTTCTGGTCATCTTGGCTCACTGTTGATGGTCTCTGCGCCT AGCGCGTTCTACGGGGTGTTTGACGGTCATGGGGGTTCAGATGCAGCAGCCTACATGAAA ACACATGCAATGAGGTTGTTCTTTGAAGATGCTGACTTCCCTCAAGCATCACAAGAGGAT AAAATATTTGCTGAATCTGTTGAGGATTCGGTCCGCAGAGCTTTCTTGCGGGCTGACCTT GCACTTGCTGATGATTCAGTCATCAACCGTTCTTCTGGCACCACAGCGCTGACAGCATTG GTCCTTGGGAGGCAACTGTTGGTAGCAAACGCTGGGGACTGCCGCGCCGTCCTGTGTAGG AAAGGGACAGCGGTGGAGGTGTCAAAGGATCACAGGCCGACATACGACGCAGAGCGTCAA AGGGTTATCGAGTGCGGTGGATACATCGAAGATGGGTACCTCAACGGCGTACTCTCTGTG ACCCGGGCTTTAGGGGACTGGGACATGAAGCTGCCCCAAGGCTCTCCGTCGCCCCTTATC GCAGAGCCAGAGATCCACTGGACCACCCTGACGGAAGACGACGAGTTCCTCATCATCGGC TGCGATGGGATATGGGATGTGATGAGCAGCCAGCACGCGGTGAGCACGGTCCGCAAGGGC CTCCGGAGGCACGATGACCCCGGGCGGAGTGCCCAGGAGCTCGCCATGGAGGCGAAGAGG CTCGAGACCTTCGACAACCTCACCGTGATCGTTGTCTGCTTTGTCCCCGACCTCGCCGGG GGCTCGGCTACGCCCTCGGAGCAGGTGCCGGCTGGAAGGATCAGGTGCCGCAAGAGCTTG TCGCCAGAGGCACTCTGCAAGCTGAGGAGATGGCTCGAGTCTGACCAGTAG

Peptide Sequence

PEP ID	Zm00001d008171_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:8:77622:80307:1 gene:Zm00001d008171 transcript:Zm00001d008171_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 49
Sequence	MGAGAEVMHQVVPLLEPPLHRCVVKSVDVMEEVVAVAPGQVQPATSPKALLEVAVEVPDL ELKRSSNAGSSVSAEQLQFVPIIRSGSFADIGPRRFMEDEHIRIDDLSGHLGSLLMVSAP SAFYGVFDGHGGSDAAAYMKTHAMRLFFEDADFPQASQEDKIFAESVEDSVRRAFLRADL ALADDSVINRSSGTTALTALVLGRQLLVANAGDCRAVLCRKGTAVEVSKDHRPTYDAERQ RVIECGGYIEDGYLNGVLSVTRALGDWDMKLPQGSPSPLIAEPEIHWTTLTEDDEFLIIG CDGIWDVMSSQHAVSTVRKGLRRHDDPGRSAQELAMEAKRLETFDNLTVIVVCFVPDLAG GSATPSEQVPAGRIRCRKSLSPEALCKLRRWLESDQ

Transcript Sequence

Transcript ID	Zm00001d008171_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:8:77622:80307:1 gene:Zm00001d008171 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 49
Sequence	ACTTCTTTCTTGTTCGGATCGGGTCAGGTCAGTGCTCCGTGTTGCGTTTTCTTAAGAACA CGAAAAAAAAAGAGGGGAGAGTTTCTTTCGGGTCCTCTTTTTCTTTGATTGTCGAAAGGC CGCTCCTTTAGGAGATTTGCGCGCTTCTCGTCGAGATTAGCCGCCGGTGCTCGGATCGAT CTGTTTGCGGTGGAGGAATTTTGAGGCCAAGAAGAGAGTTGGAATCGGATCGGGAGTTCT TGTGGTCACAGGGTGCGAAAAAAGCGAGTGATTTTTGGGAGGATTTCTTGTTGGGAAAAA ATCGGTTGTTCAGCGGATTAGAGGCGGAGATGGGAGCCGGGGCTGAGGTCATGCATCAGG TCGTGCCGCTGCTGGAGCCGCCGCTCCACCGGTGCGTCGTTAAGAGCGTCGATGTCATGG AGGAGGTGGTTGCCGTGGCGCCTGGGCAGGTGCAGCCAGCGACGTCGCCGAAGGCGCTGT TGGAGGTTGCCGTAGAGGTGCCCGATCTGGAGTTGAAGAGATCTTCTAATGCTGGGAGTA GTGTATCTGCAGAACAACTGCAGTTTGTCCCTATCATTCGATCTGGTAGCTTTGCTGATA TTGGACCTAGGCGGTTCATGGAAGATGAGCATATTAGAATTGATGATCTTTCTGGTCATC TTGGCTCACTGTTGATGGTCTCTGCGCCTAGCGCGTTCTACGGGGTGTTTGACGGTCATG GGGGTTCAGATGCAGCAGCCTACATGAAAACACATGCAATGAGGTTGTTCTTTGAAGATG CTGACTTCCCTCAAGCATCACAAGAGGATAAAATATTTGCTGAATCTGTTGAGGATTCGG TCCGCAGAGCTTTCTTGCGGGCTGACCTTGCACTTGCTGATGATTCAGTCATCAACCGTT CTTCTGGCACCACAGCGCTGACAGCATTGGTCCTTGGGAGGCAACTGTTGGTAGCAAACG CTGGGGACTGCCGCGCCGTCCTGTGTAGGAAAGGGACAGCGGTGGAGGTGTCAAAGGATC ACAGGCCGACATACGACGCAGAGCGTCAAAGGGTTATCGAGTGCGGTGGATACATCGAAG ATGGGTACCTCAACGGCGTACTCTCTGTGACCCGGGCTTTAGGGGACTGGGACATGAAGC TGCCCCAAGGCTCTCCGTCGCCCCTTATCGCAGAGCCAGAGATCCACTGGACCACCCTGA CGGAAGACGACGAGTTCCTCATCATCGGCTGCGATGGGATATGGGATGTGATGAGCAGCC AGCACGCGGTGAGCACGGTCCGCAAGGGCCTCCGGAGGCACGATGACCCCGGGCGGAGTG CCCAGGAGCTCGCCATGGAGGCGAAGAGGCTCGAGACCTTCGACAACCTCACCGTGATCG TTGTCTGCTTTGTCCCCGACCTCGCCGGGGGCTCGGCTACGCCCTCGGAGCAGGTGCCGG CTGGAAGGATCAGGTGCCGCAAGAGCTTGTCGCCAGAGGCACTCTGCAAGCTGAGGAGAT GGCTCGAGTCTGACCAGTAGACGCTTCTATCTGTAGAGGCCAGCGCCAGCCTGTGTTTCT GTGCTGTGGCTGTGTAAATATTGGCGCTGATGGTGTTCCGTCTAGTACGGCTGTGCTTAC ACGGCCAGCAATTTTGTAGCTGAGAGAGAGTTCCCCCCACCGCCGCTGCCGCTTTTGTTT CACACCGTTTTGTACTTTTGTGGGATGTACATACCATTACCATTGTTGCTCGGTTCGGCT CAGTTTGGCAGAGAGAATAACTACTCTAGTTCGCTACCA