Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007972_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:244351636:244356560:1 gene:Zm00001d007972 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGGCCTCCTCGTCGGAGAACGCGGCTGTGCCGCCGGAGGAGGAGCCCCAGGCCCCGCCG CCGCCGGACACAGAGCCTACCGAGGCGGCGCCCGGCGAGGCGGAGGATGAGCCGCAAACC CTAGAGCGGGCGCAGGAGCTCTTCGACAGGGGTTCCAAGGCCATCGAGGATGAGGACTTC GTCGACGCCGTAGACTGTCTCAGCCGAGCGCTCGAGATCAGGTTAGGGTTTCCTTTCCCC TTCCCATTTCCCCCCTCTACCTCGGCGACATTAGCTGTGAAGCGACTCCGCGTGTCGGCA GAGTTCGGACCAATTGGCGGTTGGGCTTCACATTATGGAGAGCTCGCACCGGAGTGTGCC AGCACATACTTCAAATATGGATGTGCCCTGCTATACAAAGCTCAGGAGGAGAGTGATGTT TTGGGAAATGTTCCCAAGAGCTTGCCAAATGAAGACTCAGTGAAGAGTACAGCTACTAAA GATGACAGTGGAACCTCAAAGGTCTCTGGTACCGATGCGGAGGATGCTGCGTCATCAGAA AAAGTTGATGCTGAAGAAGGTCACAACTCAAATGGCAAAAATCAGGAGAATGGGAATGGT GAAGTTGAGAAAGATGATGACGACGTCGACGATGATGAGAAGATGGGAGATGAAGAGGAT AATGATTTGGATCTTTCTTGGAAAATGTTGGACATTGCTAGGGCAATAGTTGAGAAGAGC CAAGATAACACTATGGAGAAAGTAAAAATATATTCTGCTCTTGCTGAAGTGGCAACGGAA AGAGAGGACATGGACAACTCACTCAGTGACTATATGAAAGCTTTATCCATGTTGGAGCAT TTGGTTGAGCCTGACCATCGTCGAGTTGTGGAATTGTATCCTCTTTGTCATAGTTACACT ATTTTGTCTGCTAAAGAGAGATATTACAACCTGCATCTTAGAAACTTCCGCATTTGTTTG GTTTATGAACTAGTTTCCAAGATCGGAGAAGCAATTTCATACTGTGCAAAAGCAATTTCG CTATGCAAGTCACGCATACAGAGCCTGAAAAGTTCCAAGGATGCTTTGTTGGCTGGTATA GATGGTGATGCATCTGCTGCTGAAGCTGAAGGAGGCTCAGAAAAATCTGCCATTGAAAAA GAGCTAGAGCAGCTTACTAGCATATTGCCTGATCTTGAGAAGAAGCTTGAGGACCTGTCT GAAGCAAACCCAAGCGCTGACATGGATGAGATGGTGAAGGCAATCGTGTCCAGGGTAACT GATGTGATGCCAAAAGCTGCATCTTTTACTTCTTCCCAGATGGCAACCTCAAGCAATGGA TTCGACTCCTCGGTTATGTCTACGGCAGCGACAACCGGAAGCTCTGGAAGCACCGTGACT GACCTTGGGGTTGTAGGCAGAGGCGTCAAACGAGCTAGCATCAAGCCGATCTCTGCTGAA CCTGCTGCTAAGAAACCTGCACTTGATTCACCATCTCAACAAGGTGACAGCAGCATCAAC TCTGAGGTTGTTCCTGCAACGCAGACTGGAGACGAGTCAGTATCTAAGTAA

Peptide Sequence

PEP ID	Zm00001d007972_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:244351636:244356560:1 gene:Zm00001d007972 transcript:Zm00001d007972_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	MASSSENAAVPPEEEPQAPPPPDTEPTEAAPGEAEDEPQTLERAQELFDRGSKAIEDEDF VDAVDCLSRALEIRLGFPFPFPFPPSTSATLAVKRLRVSAEFGPIGGWASHYGELAPECA STYFKYGCALLYKAQEESDVLGNVPKSLPNEDSVKSTATKDDSGTSKVSGTDAEDAASSE KVDAEEGHNSNGKNQENGNGEVEKDDDDVDDDEKMGDEEDNDLDLSWKMLDIARAIVEKS QDNTMEKVKIYSALAEVATEREDMDNSLSDYMKALSMLEHLVEPDHRRVVELYPLCHSYT ILSAKERYYNLHLRNFRICLVYELVSKIGEAISYCAKAISLCKSRIQSLKSSKDALLAGI DGDASAAEAEGGSEKSAIEKELEQLTSILPDLEKKLEDLSEANPSADMDEMVKAIVSRVT DVMPKAASFTSSQMATSSNGFDSSVMSTAATTGSSGSTVTDLGVVGRGVKRASIKPISAE PAAKKPALDSPSQQGDSSINSEVVPATQTGDESVSK

Transcript Sequence

Transcript ID	Zm00001d007972_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:244351636:244356560:1 gene:Zm00001d007972 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGGCCTCCTCGTCGGAGAACGCGGCTGTGCCGCCGGAGGAGGAGCCCCAGGCCCCGCCG CCGCCGGACACAGAGCCTACCGAGGCGGCGCCCGGCGAGGCGGAGGATGAGCCGCAAACC CTAGAGCGGGCGCAGGAGCTCTTCGACAGGGGTTCCAAGGCCATCGAGGATGAGGACTTC GTCGACGCCGTAGACTGTCTCAGCCGAGCGCTCGAGATCAGGTTAGGGTTTCCTTTCCCC TTCCCATTTCCCCCCTCTACCTCGGCGACATTAGCTGTGAAGCGACTCCGCGTGTCGGCA GAGTTCGGACCAATTGGCGGTTGGGCTTCACATTATGGAGAGCTCGCACCGGAGTGTGCC AGCACATACTTCAAATATGGATGTGCCCTGCTATACAAAGCTCAGGAGGAGAGTGATGTT TTGGGAAATGTTCCCAAGAGCTTGCCAAATGAAGACTCAGTGAAGAGTACAGCTACTAAA GATGACAGTGGAACCTCAAAGGTCTCTGGTACCGATGCGGAGGATGCTGCGTCATCAGAA AAAGTTGATGCTGAAGAAGGTCACAACTCAAATGGCAAAAATCAGGAGAATGGGAATGGT GAAGTTGAGAAAGATGATGACGACGTCGACGATGATGAGAAGATGGGAGATGAAGAGGAT AATGATTTGGATCTTTCTTGGAAAATGTTGGACATTGCTAGGGCAATAGTTGAGAAGAGC CAAGATAACACTATGGAGAAAGTAAAAATATATTCTGCTCTTGCTGAAGTGGCAACGGAA AGAGAGGACATGGACAACTCACTCAGTGACTATATGAAAGCTTTATCCATGTTGGAGCAT TTGGTTGAGCCTGACCATCGTCGAGTTGTGGAATTGTATCCTCTTTGTCATAGTTACACT ATTTTGTCTGCTAAAGAGAGATATTACAACCTGCATCTTAGAAACTTCCGCATTTGTTTG GTTTATGAACTAGTTTCCAAGATCGGAGAAGCAATTTCATACTGTGCAAAAGCAATTTCG CTATGCAAGTCACGCATACAGAGCCTGAAAAGTTCCAAGGATGCTTTGTTGGCTGGTATA GATGGTGATGCATCTGCTGCTGAAGCTGAAGGAGGCTCAGAAAAATCTGCCATTGAAAAA GAGCTAGAGCAGCTTACTAGCATATTGCCTGATCTTGAGAAGAAGCTTGAGGACCTGTCT GAAGCAAACCCAAGCGCTGACATGGATGAGATGGTGAAGGCAATCGTGTCCAGGGTAACT GATGTGATGCCAAAAGCTGCATCTTTTACTTCTTCCCAGATGGCAACCTCAAGCAATGGA TTCGACTCCTCGGTTATGTCTACGGCAGCGACAACCGGAAGCTCTGGAAGCACCGTGACT GACCTTGGGGTTGTAGGCAGAGGCGTCAAACGAGCTAGCATCAAGCCGATCTCTGCTGAA CCTGCTGCTAAGAAACCTGCACTTGATTCACCATCTCAACAAGGTGACAGCAGCATCAAC TCTGAGGTTGTTCCTGCAACGCAGACTGGAGACGAGTCAGTATCTAAGTAAATTACAATT TCATTAGCCCTACTGTAATGTTAACTTGCTGGAACATATTAGCTGCTATGTAAACGCTTA AGAAGGGACTGCTGGGGCCATAGACTCATCGTGAGCTGACCATTGAAATGTTAAATTGCT GAGATCATCATGGCGGTAAATCATGTCTGCTATATCAAATATGCTTGGTGAGATGTGTAC TTTCTGATTTTTTTGATGTATCTGACCGTAGTAGCCCA