Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007943_T060
CDS Infomation	cds chromosome:B73_RefGen_v4:2:243530116:243548127:-1 gene:Zm00001d007943 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	ATGGACCCCGACGCCGGCGGGGCTGGGGCCGGGGGCCGGGCGGGCTTCGAGCGGGCGTGC CGGCTGCCCAACACCGTCCACTCCGAGGTCCTGCCGTCGCTGCCGCTCCCCACCCTCCCG CGCGAGCTCGGCTTCGACGCGCTCCGCGACGACGAGCCCCTCGCCGCGCCCGACCGCCCC GACATGATCATGCAGGCCGCCAACATCGCCCGCATCCTCGCCGACACCGACGTCTCCCAC CTGGGCTTCACCGCGGCGGACAACGTCGAAGTGGATCCCAGCCGGTGCTCCTGGCTCTGG AGGGAGGTGCTCAAGCACAACCCCGACGCCTTCAAGGTCAAGGCGCCCGGGCCGTCTTCT CAAGGTCCATTTGGAGGCCCAGGATACCACAATCAAGAACGTGAGAAGCACTTTGAACAT CTTACACCTAATATGAGCAAAACACGAAATGGATCTGCATTTTCTCAGGATGAAATTAAC TCACACAGAGAGCATTTTCGTAATGAACTGACCCCAGATTCAGTTGCTTCAAAGAAGCCA AAAGTAAGGAAGAAAGAAATTAACAATTCTGTTTCAACTTCTCCCCACAGCATTCCTAAT AATCAAGAAGTTATTGCTACCTTCTGTGAGGCGGTGGAGGATTTCTGTGGAAAAGCTGAA ATTCCTGACGATGGTGATGGTGGTGACTGGTTGTCAATCCCACTTGACGATGTTAAGGTT CTTGTGAATGAAATTACATCTGTTCGATCCAAAAGGATATTGCATGAGGTTCCTATGGAT ACAGTTACAAGGTTATTAGACGTGATTGACCGTCAGATTCGATGTTCTCAAGGTTTGTCG ATAGATGTGAAGGAAAATTCTGACGCCTTTGATGCTGAACCTCTGGTTTTCTCTGCTTTG GAGTCCAGTCATGCTGCGTTGGCAATTATGACCCACCATGATATGCCAAAGCAACTGTAT CGGGAAGAACTTATTGAGCGTATTATCGATTTCTCAAGGCATCAGATCACAGATTGTATG GCAGCAAGTAACCCAACCTTTCGAGCTCTCTACAAACCAGCTGGAAATGTTGCAAATGAT GGAGATGATGATGAAGGTGATTTGGAAAATGGACAAGTTAGCAAAAGGAGACGTACTGCT ACTAATTTGAGCATGAGAAAATCTTCAAACAGAGTTTCTGCTTCTGTTTATTCTGCTGTG CAGAAACTATGCTTGATATTGGGTTTTCTTAAGGAACTGCTCACAACAGTGCGCTTGTCA GATAGTTGTATTCTGCAATTAGCGAAAACATGCTTTACTACATTCTTGGTGGATAATATG CAGCTATTACAATTGAAAGCGATTGGGGTTATTTGCACGGTGTTTTCATCATACACACAG CACAGGAGTTACTTGGTTGATGAAACACTTCACCTTCTTCGTAAGTTGCAGTTTTCCAAG AATGCCGTTAGAACCTACCATCTAGCAGATGAAGACCAAAAGCAAATCCAGATGATAACA GCACTGTTAGTTCACTTGGTTCAGTTTAGTGCTATTGTTCCTGATAGCTTAAAGGGAACA GTTGATTGGACCACTATCGTTGATGCCTCTAGTGATGCTGATTATTATCCAATTCAATGC CATGAAGCGGCAACAGAGGCTTGTTGTCGTTTTTGGACTGATGTCCTTCAACGTTTTACT GCTGCTAAATCTCAAGATATGTCGGAAACCAAAGGGATAATAGACAATCTTGTTCAGGAT TTCCTAACGATACTAAACTTGCCGGAGTATCCAGCTGCTGCTTCTATTCTTGAGGTTCTC TGCGTGTTGCTGCTTCAGAATGCTGGATTGAAATCTAAGGACATTAATGCTCGGTGCTTT GCTATTGATCTTCTTGGTGGTATTGCATCAAGATTAAAGCGTGATTCTGTCGTCTGTAGT GAAGAAAAGCTTTGGATATTGCAAGATTTCACTGATAAAGGCAGTGACGGCTCAATTTTT TTGAAAAACAAGTGTTGCGTTTGTCTTGGTGGAAGAGGCATAAATATAGCCTGTAATGAA TGTGGAAGATGTTTCCATTCAGATTGTATGGGGGCTGGTAGTCAGGATAACTTACAGCGT GATAGTGTCTGCCCCTTGTGTTTTTGCAAACAACAGCTCAATGTGCTACAGTCGTACTGC CAGTCACAAATTAAAGAAAATGGCAAAAAAACTGCTGCCTCTGCCAGTAAGAAATCTGCT AAACCAACTGAGGTGTCAGCAGTGGAAATTGTTCAACAAATACTACTGAGTTATCTCCAA GAAGCTGGTTCACAAGATGATGGGAACCTGTTTACTCGATGGTTCTATCTGTGCATCTGG AACAAAGATGACCAACATTCTCAGGAGAAGATCATTTACTATCTTGCTAGATTAAAATCC AAGGAGATTCTGCGAGATTCTGGCAATGGTCTGGCAATTTCCAGAGATTCAGCAAAGAAA ATTTGCTTGGCACTTGGTCAGAAGAACTCATTTTGTAGGGGTTTTGATAAAATTCTTGCC CTTCTTTTGGCTAGTTTGAGAGAAAATTCTCCTGTAATAAGAGCAAAAGCATTACGTGCG GTCAGCTGTATAGTTGAAGCTGATCCTGAGGTCTTGGGTGACAAACGTGTCCAATATGCT GTTGAAGGGAGATTTTGTGATTCAGCTATTTCTGTTCGTGAAGCTGCCCTTGAACTTGTT GGGAGGCATATTGCTTCACATCCTGATGTGGGCCTGAAGTATATAGAAAAAGTTGCTGAG CGGATAAAGGACACTGGAGTCAGCGTTCGCAAGCGTGCAATCAAAATTATAAGGGATCTT TGTGCTTCAAATCCGAACACGGACACAACTCATGCCTTTGTGGAGATAATTTCTCGTGTT AATGATGAGGAGTCCAGTGTACAGGATCTTGTATGTAAAACATTTTATGAACTATGGTTT GAAGAACCAACTGGGAGTCATAAGCACTTGGTTGCTGATGGAAGTTCAGTTCCAATGGAG ATAGCTAAAAAGACTGAGCAAATTGTTGACATGTTGAGGAAGATGCCCAATCACCAACCC CTGATTACCATCATAAAACGTAACTTGACTCTTGATTTCCTCCCTCAGTCAACCAAGGCT GCAGGGATTAACTCATCCATGGTGGCATCAATTCGGAAGCGTTGTGAATTGATATGCAAA CGCTTATTAGAAAGAATATTGCAGGTTGAGGAGGGAGCTGCTAATGAGATGGAAATCCAC ACACTACCTTATATTGTTGCCTTGCAAGCATTCTGTATTGTTGATCCCACACTCTGCATT CCAGTAACTGATCCTTCTAAGTTTGTTGTGACACTGCAACCATACCTTAATATTCAGGTT GACAATAAATCATCTGCCCAGTTGCTTGAAAGTATTATTTTTGTGATTGATGCTGTTCTT CCACTCATAAGGAAGCCACCACAAAATGTTGTTGAAGAACTTGAGAAGGATCTGAAACAT ATGATAGTTCGCCATTCGTATTTGACAGTTGTACATGCCTGTATCAAGTAA

Peptide Sequence

PEP ID	Zm00001d007943_P060
PEP Infomation	pep chromosome:B73_RefGen_v4:2:243530116:243548127:-1 gene:Zm00001d007943 transcript:Zm00001d007943_T060 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	MDPDAGGAGAGGRAGFERACRLPNTVHSEVLPSLPLPTLPRELGFDALRDDEPLAAPDRP DMIMQAANIARILADTDVSHLGFTAADNVEVDPSRCSWLWREVLKHNPDAFKVKAPGPSS QGPFGGPGYHNQEREKHFEHLTPNMSKTRNGSAFSQDEINSHREHFRNELTPDSVASKKP KVRKKEINNSVSTSPHSIPNNQEVIATFCEAVEDFCGKAEIPDDGDGGDWLSIPLDDVKV LVNEITSVRSKRILHEVPMDTVTRLLDVIDRQIRCSQGLSIDVKENSDAFDAEPLVFSAL ESSHAALAIMTHHDMPKQLYREELIERIIDFSRHQITDCMAASNPTFRALYKPAGNVAND GDDDEGDLENGQVSKRRRTATNLSMRKSSNRVSASVYSAVQKLCLILGFLKELLTTVRLS DSCILQLAKTCFTTFLVDNMQLLQLKAIGVICTVFSSYTQHRSYLVDETLHLLRKLQFSK NAVRTYHLADEDQKQIQMITALLVHLVQFSAIVPDSLKGTVDWTTIVDASSDADYYPIQC HEAATEACCRFWTDVLQRFTAAKSQDMSETKGIIDNLVQDFLTILNLPEYPAAASILEVL CVLLLQNAGLKSKDINARCFAIDLLGGIASRLKRDSVVCSEEKLWILQDFTDKGSDGSIF LKNKCCVCLGGRGINIACNECGRCFHSDCMGAGSQDNLQRDSVCPLCFCKQQLNVLQSYC QSQIKENGKKTAASASKKSAKPTEVSAVEIVQQILLSYLQEAGSQDDGNLFTRWFYLCIW NKDDQHSQEKIIYYLARLKSKEILRDSGNGLAISRDSAKKICLALGQKNSFCRGFDKILA LLLASLRENSPVIRAKALRAVSCIVEADPEVLGDKRVQYAVEGRFCDSAISVREAALELV GRHIASHPDVGLKYIEKVAERIKDTGVSVRKRAIKIIRDLCASNPNTDTTHAFVEIISRV NDEESSVQDLVCKTFYELWFEEPTGSHKHLVADGSSVPMEIAKKTEQIVDMLRKMPNHQP LITIIKRNLTLDFLPQSTKAAGINSSMVASIRKRCELICKRLLERILQVEEGAANEMEIH TLPYIVALQAFCIVDPTLCIPVTDPSKFVVTLQPYLNIQVDNKSSAQLLESIIFVIDAVL PLIRKPPQNVVEELEKDLKHMIVRHSYLTVVHACIK

Transcript Sequence

Transcript ID	Zm00001d007943_T060
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:243530116:243548127:-1 gene:Zm00001d007943 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	CCTCCTCCAGTCCTCCCCAACAATCGAATTCCGGTGCGAATTGGAGCCCTCAGCCCTCCC GCGCATCTAGGGTTTTGCCCATGGACCCCGACGCCGGCGGGGCTGGGGCCGGGGGCCGGG CGGGCTTCGAGCGGGCGTGCCGGCTGCCCAACACCGTCCACTCCGAGGTCCTGCCGTCGC TGCCGCTCCCCACCCTCCCGCGCGAGCTCGGCTTCGACGCGCTCCGCGACGACGAGCCCC TCGCCGCGCCCGACCGCCCCGACATGATCATGCAGGCCGCCAACATCGCCCGCATCCTCG CCGACACCGACGTCTCCCACCTGGGCTTCACCGCGGCGGACAACGTCGAAGTGGATCCCA GCCGGTGCTCCTGGCTCTGGAGGGAGGTGCTCAAGCACAACCCCGACGCCTTCAAGGTCA AGGCGCCCGGGCCGTCTTCTCAAGGTCCATTTGGAGGCCCAGGATACCACAATCAAGAAC GTGAGAAGCACTTTGAACATCTTACACCTAATATGAGCAAAACACGAAATGGATCTGCAT TTTCTCAGGATGAAATTAACTCACACAGAGAGCATTTTCGTAATGAACTGACCCCAGATT CAGTTGCTTCAAAGAAGCCAAAAGTAAGGAAGAAAGAAATTAACAATTCTGTTTCAACTT CTCCCCACAGCATTCCTAATAATCAAGAAGTTATTGCTACCTTCTGTGAGGCGGTGGAGG ATTTCTGTGGAAAAGCTGAAATTCCTGACGATGGTGATGGTGGTGACTGGTTGTCAATCC CACTTGACGATGTTAAGGTTCTTGTGAATGAAATTACATCTGTTCGATCCAAAAGGATAT TGCATGAGGTTCCTATGGATACAGTTACAAGGTTATTAGACGTGATTGACCGTCAGATTC GATGTTCTCAAGGTTTGTCGATAGATGTGAAGGAAAATTCTGACGCCTTTGATGCTGAAC CTCTGGTTTTCTCTGCTTTGGAGTCCAGTCATGCTGCGTTGGCAATTATGACCCACCATG ATATGCCAAAGCAACTGTATCGGGAAGAACTTATTGAGCGTATTATCGATTTCTCAAGGC ATCAGATCACAGATTGTATGGCAGCAAGTAACCCAACCTTTCGAGCTCTCTACAAACCAG CTGGAAATGTTGCAAATGATGGAGATGATGATGAAGGTGATTTGGAAAATGGACAAGTTA GCAAAAGGAGACGTACTGCTACTAATTTGAGCATGAGAAAATCTTCAAACAGAGTTTCTG CTTCTGTTTATTCTGCTGTGCAGAAACTATGCTTGATATTGGGTTTTCTTAAGGAACTGC TCACAACAGTGCGCTTGTCAGATAGTTGTATTCTGCAATTAGCGAAAACATGCTTTACTA CATTCTTGGTGGATAATATGCAGCTATTACAATTGAAAGCGATTGGGGTTATTTGCACGG TGTTTTCATCATACACACAGCACAGGAGTTACTTGGTTGATGAAACACTTCACCTTCTTC GTAAGTTGCAGTTTTCCAAGAATGCCGTTAGAACCTACCATCTAGCAGATGAAGACCAAA AGCAAATCCAGATGATAACAGCACTGTTAGTTCACTTGGTTCAGTTTAGTGCTATTGTTC CTGATAGCTTAAAGGGAACAGTTGATTGGACCACTATCGTTGATGCCTCTAGTGATGCTG ATTATTATCCAATTCAATGCCATGAAGCGGCAACAGAGGCTTGTTGTCGTTTTTGGACTG ATGTCCTTCAACGTTTTACTGCTGCTAAATCTCAAGATATGTCGGAAACCAAAGGGATAA TAGACAATCTTGTTCAGGATTTCCTAACGATACTAAACTTGCCGGAGTATCCAGCTGCTG CTTCTATTCTTGAGGTTCTCTGCGTGTTGCTGCTTCAGAATGCTGGATTGAAATCTAAGG ACATTAATGCTCGGTGCTTTGCTATTGATCTTCTTGGTGGTATTGCATCAAGATTAAAGC GTGATTCTGTCGTCTGTAGTGAAGAAAAGCTTTGGATATTGCAAGATTTCACTGATAAAG GCAGTGACGGCTCAATTTTTTTGAAAAACAAGTGTTGCGTTTGTCTTGGTGGAAGAGGCA TAAATATAGCCTGTAATGAATGTGGAAGATGTTTCCATTCAGATTGTATGGGGGCTGGTA GTCAGGATAACTTACAGCGTGATAGTGTCTGCCCCTTGTGTTTTTGCAAACAACAGCTCA ATGTGCTACAGTCGTACTGCCAGTCACAAATTAAAGAAAATGGCAAAAAAACTGCTGCCT CTGCCAGTAAGAAATCTGCTAAACCAACTGAGGTGTCAGCAGTGGAAATTGTTCAACAAA TACTACTGAGTTATCTCCAAGAAGCTGGTTCACAAGATGATGGGAACCTGTTTACTCGAT GGTTCTATCTGTGCATCTGGAACAAAGATGACCAACATTCTCAGGAGAAGATCATTTACT ATCTTGCTAGATTAAAATCCAAGGAGATTCTGCGAGATTCTGGCAATGGTCTGGCAATTT CCAGAGATTCAGCAAAGAAAATTTGCTTGGCACTTGGTCAGAAGAACTCATTTTGTAGGG GTTTTGATAAAATTCTTGCCCTTCTTTTGGCTAGTTTGAGAGAAAATTCTCCTGTAATAA GAGCAAAAGCATTACGTGCGGTCAGCTGTATAGTTGAAGCTGATCCTGAGGTCTTGGGTG ACAAACGTGTCCAATATGCTGTTGAAGGGAGATTTTGTGATTCAGCTATTTCTGTTCGTG AAGCTGCCCTTGAACTTGTTGGGAGGCATATTGCTTCACATCCTGATGTGGGCCTGAAGT ATATAGAAAAAGTTGCTGAGCGGATAAAGGACACTGGAGTCAGCGTTCGCAAGCGTGCAA TCAAAATTATAAGGGATCTTTGTGCTTCAAATCCGAACACGGACACAACTCATGCCTTTG TGGAGATAATTTCTCGTGTTAATGATGAGGAGTCCAGTGTACAGGATCTTGTATGTAAAA CATTTTATGAACTATGGTTTGAAGAACCAACTGGGAGTCATAAGCACTTGGTTGCTGATG GAAGTTCAGTTCCAATGGAGATAGCTAAAAAGACTGAGCAAATTGTTGACATGTTGAGGA AGATGCCCAATCACCAACCCCTGATTACCATCATAAAACGTAACTTGACTCTTGATTTCC TCCCTCAGTCAACCAAGGCTGCAGGGATTAACTCATCCATGGTGGCATCAATTCGGAAGC GTTGTGAATTGATATGCAAACGCTTATTAGAAAGAATATTGCAGGTTGAGGAGGGAGCTG CTAATGAGATGGAAATCCACACACTACCTTATATTGTTGCCTTGCAAGCATTCTGTATTG TTGATCCCACACTCTGCATTCCAGTAACTGATCCTTCTAAGTTTGTTGTGACACTGCAAC CATACCTTAATATTCAGGTTGACAATAAATCATCTGCCCAGTTGCTTGAAAGTATTATTT TTGTGATTGATGCTGTTCTTCCACTCATAAGGAAGCCACCACAAAATGTTGTTGAAGAAC TTGAGAAGGATCTGAAACATATGATAGTTCGCCATTCGTATTTGACAGTTGTACATGCCT GTATCAAGTAAATGCATCCCCCCTTCCCTATTTCCCTAATTATTGTTTGATGAGCATTGT TTCTCCCTATGTTCTATTTGGAGTTGAGAATTCATTTCATGAGTTCGTAT