Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007937_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:243428038:243432761:-1 gene:Zm00001d007937 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alanine amino transferase8 description: alanine amino transferase8
Sequence	ATGGCGAGGAGGAGGCCGATGGACTACGAGGAGCTGAACGAGAAAGTCAAGAAGGCGCAG TACGCGGTGCGCGGGGAGCTGTACCTCCGCGCCTCCCAGCTCCAGAAGGAGGGCAAGAAG ATCATCTTCACCAACGTCGGCAACCCGCACGCCCTCGGCCAGAAGCCGCTCACCTTCCCG CGCCAGGTGGTGGCGCTGTGCCAGGCTCCGTTCCTCCTCGATGACCCCAATGTCGGCCTC ATGTTCCCGCCCGATGCCATCGTGCGGGCCAAGCGCTATCTCGCCATGGCGCCGGGAGGT CTAGGTGCGTACAGTGATGCCCGTGGTATCCCCGGAATCAGGAAGGAAGTTGCTGACTTC ATCCACAAGCGTGATGGATATCCGAGTGACCCAGAACTCATTTACCTGACAGACGGCGCC AGCAAAGGTGTGATGCAAATGCTGAATGCCATCATTAGAAACGAGAGGGATGGGATCTTG GTTCCTGTTCCTCAGTACCCACTTTATTCTGCTATCATTTCCCTCTTTGGTGGGTCTCTG GTCCCATACTACTTGGAAGAAGAGGCTAACTGGAACCTTGACTTTGCAAACATCCGACAA GCAGTGGCCGAGGCACGTTCGAAGGGAATCACTGTTCGAGCGACGGTGATTATAAATCCA GGAAATCCCACTGGCCAGTGCCTTAGTGAAGCAAATATAAGGGAACTTGTGCGATATTGC TACCATGAAAACTTAGTTCTGCTTGCAGACGAAGTGTATCAGCAGAACGTTTATCAAGAT GAGCGCCCATTTATAAGCGCAAGAAAGGTTATGTTCGACATGGGTCCGCCAATAAGCAGG GAGGTTCAGCTTGTTTCTTTCCACACTGTGTCCAAAGGGTACTGGGGAGAGTGTGGACAA CGTGGTGGATACTTCGAAATGACAAATCTTCCTCCAAAGACAGTAGATGAGATCTACAAG GTTGCATCAATAGTACTGAGTCCGAATGTTCCCGGGCAAATCTTTATGGGAGTGATGGTT AACCCTCCTAAACCTGGAGATATCTCATACCCGAAGTTCACTGCCGAAAGCAAGTCCATC CTCGAATCTTTGAGGAGGAGAGCGCGCATGATGACAGACGGTTTCAACAGCTGCCGAAAC GTGGTGTGCAATTTCACAGAAGGAGCTATGTACTCTTTCCCCCAAATACAGCTGCCAGCA AGAGCCATCGAGGCGGCAAAGAGAGCCGGCAAAGCAGCAGACGTTTTCTACTGCCTCAAG CTCCTGGAGGCAACGGGGATTTCCACTGTTCCGGGATCTGGTTTTGGGCAGAAGGAAGGG GTGTTCCACCTTCGGACAACTATCCTTCCAGCCGAGGAAGACTTCCCTACCATCATGTCG AGCTTCAAGAAGTTCAACGACTCATTCATGGAGCAATACGAGGGCTACTCCAGGATGTGA

Peptide Sequence

PEP ID	Zm00001d007937_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:243428038:243432761:-1 gene:Zm00001d007937 transcript:Zm00001d007937_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alanine amino transferase8 description: alanine amino transferase8
Sequence	MARRRPMDYEELNEKVKKAQYAVRGELYLRASQLQKEGKKIIFTNVGNPHALGQKPLTFP RQVVALCQAPFLLDDPNVGLMFPPDAIVRAKRYLAMAPGGLGAYSDARGIPGIRKEVADF IHKRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERDGILVPVPQYPLYSAIISLFGGSL VPYYLEEEANWNLDFANIRQAVAEARSKGITVRATVIINPGNPTGQCLSEANIRELVRYC YHENLVLLADEVYQQNVYQDERPFISARKVMFDMGPPISREVQLVSFHTVSKGYWGECGQ RGGYFEMTNLPPKTVDEIYKVASIVLSPNVPGQIFMGVMVNPPKPGDISYPKFTAESKSI LESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIQLPARAIEAAKRAGKAADVFYCLK LLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDFPTIMSSFKKFNDSFMEQYEGYSRM

Transcript Sequence

Transcript ID	Zm00001d007937_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:243428038:243432761:-1 gene:Zm00001d007937 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alanine amino transferase8 description: alanine amino transferase8
Sequence	ACACACCTCTAGTAGCGAGAGGCAAGGGACGTAAGAAGTCGTCTAATTCTTGGATCGAAT TAGACGACTTCTTCGTCCCTCTCTTCATTAGCACGCTAACTTGTAATCTGCAGGATCTAA GCAAAGACTTGATTCAGTTATGGACGGATTGGTAGGCCTCTTGAAAGTTCGTGTGGTCCG GGGTATCAACCTTGCCTACCGCGACGCAAGAGGCAGCGATCCGTATGTCGTCCTACGGCT TGGCAAGAAGAAACTGAAGACAAGCGTGAAGAAGAGATCCGTGAACCCCATATGGCAAGA GGAGCTAACTCTGACCGTCACAGATCCCAGCCAACCACTGAAGCTGGAGGTGTTCGACAA GGACACCTTCAGCAGAGACGACCCCATGGGAGACGCGGAGGTGGACGTGGCGCCACTGAT GGAGGCGGTGAGCATGAACCCGCGGGAGGAGAGTCTGAGGAACGGCGCCATCATCAGGTC CGAGCGGCCGAGCGCCAGGAACTGCCTCGCCGACGAGAGCCACGTGTGCTGGAGGAACGG CAAGTTCGCGCAGGACATGATCCTCCGGCTCAGGAACGTCGAGAGCGGGGAGATACAGCT GCAGCTGCAGTGGGTGAACTTCCCTCCTGGTCCTGGTCCTGCTGCTGCAACAACCAGGTG ACCTGATCGATGGTAGCTGCTGTTCCTGTCGCCATTGCCTCCTGCTGGCAGGAACAGGAA CTCTCTGAAGCACGGGGTCAGGGTAGTTCATGTTGCTTCGATTCGATCGTAGGGGAGATA ATGCCGGATGGCGCTGCTCATGCTTTGTAAAGTTTGGGAGGACATGCATCATAATTGAAG TCAAGTGATAGGATCCTGTTTTTTAAGTACACGATACATCCCTTTTTTTATTTGTCGCTC TCATCAGTGGACGACTGTTGATGGGGTAGTTGAGTGCTGTGAATCGTGGTGCAGCGATCG CAGTTGCAAAAGTTGCAGGGTCAGGCTGCCGCGGCAACGGGTCGTCGTCTCCTCACCTCG CCGGGGCTTTACTTATCCACCGCAGGGCCACCGAGCGAGGCGATAACCCAACCAGTATCA GCCAGCTCGCAGTCCCTCCGCCACCAATTTTTTTTTTCTCATTCTCGTTTCCAAATTATC CGCCGCTGAAACAATCTGCACCCCCACGCACAAGCACGAAGCAGTCAGCAGTAGAGTACA AATCCTCGCCTGCATCCTGGTTTTCGTCCCCATTCTCTCCCCGCCACTCCAGCGGAACGG CGGCGGGGGAGTGAGTGACGGCAACGAGGCAAGATGGCGAGGAGGAGGCCGATGGACTAC GAGGAGCTGAACGAGAAAGTCAAGAAGGCGCAGTACGCGGTGCGCGGGGAGCTGTACCTC CGCGCCTCCCAGCTCCAGAAGGAGGGCAAGAAGATCATCTTCACCAACGTCGGCAACCCG CACGCCCTCGGCCAGAAGCCGCTCACCTTCCCGCGCCAGGTGGTGGCGCTGTGCCAGGCT CCGTTCCTCCTCGATGACCCCAATGTCGGCCTCATGTTCCCGCCCGATGCCATCGTGCGG GCCAAGCGCTATCTCGCCATGGCGCCGGGAGGTCTAGGTGCGTACAGTGATGCCCGTGGT ATCCCCGGAATCAGGAAGGAAGTTGCTGACTTCATCCACAAGCGTGATGGATATCCGAGT GACCCAGAACTCATTTACCTGACAGACGGCGCCAGCAAAGGTGTGATGCAAATGCTGAAT GCCATCATTAGAAACGAGAGGGATGGGATCTTGGTTCCTGTTCCTCAGTACCCACTTTAT TCTGCTATCATTTCCCTCTTTGGTGGGTCTCTGGTCCCATACTACTTGGAAGAAGAGGCT AACTGGAACCTTGACTTTGCAAACATCCGACAAGCAGTGGCCGAGGCACGTTCGAAGGGA ATCACTGTTCGAGCGACGGTGATTATAAATCCAGGAAATCCCACTGGCCAGTGCCTTAGT GAAGCAAATATAAGGGAACTTGTGCGATATTGCTACCATGAAAACTTAGTTCTGCTTGCA GACGAAGTGTATCAGCAGAACGTTTATCAAGATGAGCGCCCATTTATAAGCGCAAGAAAG GTTATGTTCGACATGGGTCCGCCAATAAGCAGGGAGGTTCAGCTTGTTTCTTTCCACACT GTGTCCAAAGGGTACTGGGGAGAGTGTGGACAACGTGGTGGATACTTCGAAATGACAAAT CTTCCTCCAAAGACAGTAGATGAGATCTACAAGGTTGCATCAATAGTACTGAGTCCGAAT GTTCCCGGGCAAATCTTTATGGGAGTGATGGTTAACCCTCCTAAACCTGGAGATATCTCA TACCCGAAGTTCACTGCCGAAAGCAAGTCCATCCTCGAATCTTTGAGGAGGAGAGCGCGC ATGATGACAGACGGTTTCAACAGCTGCCGAAACGTGGTGTGCAATTTCACAGAAGGAGCT ATGTACTCTTTCCCCCAAATACAGCTGCCAGCAAGAGCCATCGAGGCGGCAAAGAGAGCC GGCAAAGCAGCAGACGTTTTCTACTGCCTCAAGCTCCTGGAGGCAACGGGGATTTCCACT GTTCCGGGATCTGGTTTTGGGCAGAAGGAAGGGGTGTTCCACCTTCGGACAACTATCCTT CCAGCCGAGGAAGACTTCCCTACCATCATGTCGAGCTTCAAGAAGTTCAACGACTCATTC ATGGAGCAATACGAGGGCTACTCCAGGATGTGATGTCAACATGAAAAGAAGCGACCGCGC CACCATTTTGCTTCTACTGCCCATACTAGTAGAACAGTGATCGGTGCACTATGTGATATT TTGCTGCTGCAACTGCGGCCTTAGTCTGCTATGTATGTGTTGCCTGTTCTGAAAGAGTAA AGAAGCGACCGATAATGTATATCCTGAGCCGCGCGGCGGGGAGAAAGCATTTCGCTTTTA AGGGAAAGGGAAGCATCAGCAGCGCCGCCGCCGCTAGAGCCCTAGACAGACTTAATCGCT ATCTGGGTCAGTCCAAAACAGTCGGAAACAAACCCGACAGAGGATATTTTACTCTT