Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007896_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:241903615:241906193:1 gene:Zm00001d007896 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

ATGGCGGCGAGGCTCGCGGCGGCGGTGCTGCTCTGCGCCTGCGCGGTGGGGCCGGCGACG
GCGCTGGGGGTGAACTGGGGCACGCAGGCGACGCACCCGCTGCCGCCCAAGGCCGTGGTG
CAGGTGCTCCGGGACAACGGCATCAAGAAGGTGAAGCTGTTCGATGCCGACCCCGCCGCC
ATGCGCGCGCTCGCCGGCACCGGCATCGAGGTCATGGTCGCCATCCCCAACGCCATGCTC
GCGGGCCTGGCCGCCGACGCCGGCCAGGCCAGGAACTGGGTCAAGCACAACGTCAGGCGC
TACGACTTCGACGGCGGCGTCACCATCAAGTACGTGGCCGTCGGCAACGAGCCGTTCCTG
GAGTCGTACAACGGGTCCTTCATCAACGTCACGCTCCCGGCGCTGAAGAACGTCCAGAAC
GCTCTGAACGACGCCGGGATCGGCGACCGGATCAAGGCGACCGTGCCGCTGAACGCCGAC
GTGTACAACTCCCCTCGGAGCAACCCGGTTCCGTCGGCGGGGCGGTTCCGCGCCGACATC
GCGGGGCTGATGGCGGACATGGTGAGGTTCCTGGCTCGGAACGGCGCGCCCTTCACCGTG
AACATCTACCCGTTCCTGAGCCTGTACCTGAACGAGCACTTCCCGCTGGACTACGCCTTC
TTCGACGGCGGCGCGGCGCCAGTGGACGACCACGGCGTGCTGTACACCAACGTGTTCGAC
GCCAACTTCGACACGCTGGTGGCGGCGCTGGGGGCCGTGGGGCACGGCGACATGCCGGTG
GTCGTGGGCGAGGTGGGGTGGCCCACGGACGGCGACAGGCACGCCAAGGCGTCCTACGCG
CAGCGCTTCTACGCGGGCCTGCTGCGGCGGCTGGCGGCGAACACCGGCACGCCGGCGAGG
CCGGGCCAGCGCCCGGCGGAGGTGTACCTGTTCGGGCTCGTCGACGAGGACGCCAAGAGC
GTCGCGCCGGGCAACTTCGAGCGCCACTGGGGCGTGCTGCGGTACGACGGCCAGCCCAAG
TTCGCCATGGACCTCACGGGGCAGGGCCGGGACACGACGCTGGTGCCGGCGCGCGGCGTG
GCGTACCTGTCCAGGACGTGGTGCGCGCTGAACCCCAGAGCCAAGGACCTCGGCAGGCTC
GGCGCCAACGTCGACTACGCCTGCACGTTCGCCGACTGCACGCCGCTGGGGTACGGCTCC
ACGTGCGGCGGCATGGACGTCGCCGGCAACGCGTCGTACGCGTTCAACGCGTACTACCAG
GCGCAGAACCAGAAGGACGAGGCCTGCGACTTCCAGGGCCTTGCGCTGCCCACCGAGACC
GACCCCTCCACCGCCACCTGCAACTTCACCATACAGATCCAGACGGGGGCGGCGGCCATG
GCGTCGCTCGGCCGGAGCGCGAGCGCCGCCGCGCTGGTGCTGGCGTCGGCGTCGCTGCAG
CTCCTGGCGCTGTTGTGGTAG

Peptide Sequence

PEP ID

Zm00001d007896_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:241903615:241906193:1 gene:Zm00001d007896 transcript:Zm00001d007896_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

MAARLAAAVLLCACAVGPATALGVNWGTQATHPLPPKAVVQVLRDNGIKKVKLFDADPAA
MRALAGTGIEVMVAIPNAMLAGLAADAGQARNWVKHNVRRYDFDGGVTIKYVAVGNEPFL
ESYNGSFINVTLPALKNVQNALNDAGIGDRIKATVPLNADVYNSPRSNPVPSAGRFRADI
AGLMADMVRFLARNGAPFTVNIYPFLSLYLNEHFPLDYAFFDGGAAPVDDHGVLYTNVFD
ANFDTLVAALGAVGHGDMPVVVGEVGWPTDGDRHAKASYAQRFYAGLLRRLAANTGTPAR
PGQRPAEVYLFGLVDEDAKSVAPGNFERHWGVLRYDGQPKFAMDLTGQGRDTTLVPARGV
AYLSRTWCALNPRAKDLGRLGANVDYACTFADCTPLGYGSTCGGMDVAGNASYAFNAYYQ
AQNQKDEACDFQGLALPTETDPSTATCNFTIQIQTGAAAMASLGRSASAAALVLASASLQ
LLALLW

Transcript Sequence

Transcript ID

Zm00001d007896_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:241903615:241906193:1 gene:Zm00001d007896 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

GCGACCGCGGGGTGGGGCGGAGTACCTCCGCTCCGCCTCTTCGGAGCTGGCTGGACTGTG
GCCAGCCGGATCCGCGACGTCCCAGTCCCACATTCCAGCAGCTTCCCTTCCTCCTCCTAT
CTCTCCCCCGCACCCTCCTCCTCAGTTCCTAGAGCCGCTGGAGCTCCGACCCAGAATTCC
ACTCGCGTCCTCTCCCGCCACGGTCGCTACTGTACAGTACAGTCCAGCCCCGAAATCTGT
CCACTCGTTCGCAACCCAGTCCGGCGGCCCGAGTGGCTCTCGTCGGCTCCAAGAAGCTCG
CACCGCGGTCCCGTGCGGATGGCGGCGAGGCTCGCGGCGGCGGTGCTGCTCTGCGCCTGC
GCGGTGGGGCCGGCGACGGCGCTGGGGGTGAACTGGGGCACGCAGGCGACGCACCCGCTG
CCGCCCAAGGCCGTGGTGCAGGTGCTCCGGGACAACGGCATCAAGAAGGTGAAGCTGTTC
GATGCCGACCCCGCCGCCATGCGCGCGCTCGCCGGCACCGGCATCGAGGTCATGGTCGCC
ATCCCCAACGCCATGCTCGCGGGCCTGGCCGCCGACGCCGGCCAGGCCAGGAACTGGGTC
AAGCACAACGTCAGGCGCTACGACTTCGACGGCGGCGTCACCATCAAGTACGTGGCCGTC
GGCAACGAGCCGTTCCTGGAGTCGTACAACGGGTCCTTCATCAACGTCACGCTCCCGGCG
CTGAAGAACGTCCAGAACGCTCTGAACGACGCCGGGATCGGCGACCGGATCAAGGCGACC
GTGCCGCTGAACGCCGACGTGTACAACTCCCCTCGGAGCAACCCGGTTCCGTCGGCGGGG
CGGTTCCGCGCCGACATCGCGGGGCTGATGGCGGACATGGTGAGGTTCCTGGCTCGGAAC
GGCGCGCCCTTCACCGTGAACATCTACCCGTTCCTGAGCCTGTACCTGAACGAGCACTTC
CCGCTGGACTACGCCTTCTTCGACGGCGGCGCGGCGCCAGTGGACGACCACGGCGTGCTG
TACACCAACGTGTTCGACGCCAACTTCGACACGCTGGTGGCGGCGCTGGGGGCCGTGGGG
CACGGCGACATGCCGGTGGTCGTGGGCGAGGTGGGGTGGCCCACGGACGGCGACAGGCAC
GCCAAGGCGTCCTACGCGCAGCGCTTCTACGCGGGCCTGCTGCGGCGGCTGGCGGCGAAC
ACCGGCACGCCGGCGAGGCCGGGCCAGCGCCCGGCGGAGGTGTACCTGTTCGGGCTCGTC
GACGAGGACGCCAAGAGCGTCGCGCCGGGCAACTTCGAGCGCCACTGGGGCGTGCTGCGG
TACGACGGCCAGCCCAAGTTCGCCATGGACCTCACGGGGCAGGGCCGGGACACGACGCTG
GTGCCGGCGCGCGGCGTGGCGTACCTGTCCAGGACGTGGTGCGCGCTGAACCCCAGAGCC
AAGGACCTCGGCAGGCTCGGCGCCAACGTCGACTACGCCTGCACGTTCGCCGACTGCACG
CCGCTGGGGTACGGCTCCACGTGCGGCGGCATGGACGTCGCCGGCAACGCGTCGTACGCG
TTCAACGCGTACTACCAGGCGCAGAACCAGAAGGACGAGGCCTGCGACTTCCAGGGCCTT
GCGCTGCCCACCGAGACCGACCCCTCCACCGCCACCTGCAACTTCACCATACAGATCCAG
ACGGGGGCGGCGGCCATGGCGTCGCTCGGCCGGAGCGCGAGCGCCGCCGCGCTGGTGCTG
GCGTCGGCGTCGCTGCAGCTCCTGGCGCTGTTGTGGTAGCAGCTGGTTTTGTGTGGATGT
GCGTGCTGGCATGAAGATCAACGTCGTGTACGGTTGGTTGATTGATTTCTGTGCATTTTT
TTATCATTCAAAACACGTTTTTTTATATATAATTTGGACCGGAGTAGATGCTTGTTTACT
TTCTAAGGTTGACATGTGCATAA