Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007888_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:241783640:241790905:-1 gene:Zm00001d007888 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:math-btb14 description:BTB/POZ and MATH domain-containing protein 3
Sequence

ATGGCGATTCCGCCGCGGACTCCTTCCCCGCCGCCATCGTGGTCGCGCTCTGTAACCGAG
ACCGTTCGGGGGTCCCACCAGTTCACCGTACGGGGCTACTCCCTCGCCAAGGGCATGGGC
CCCGGCCGCTACCTCGCCAGCGACGTCTTCGCCGTCGGAGGATACCACTGGGCCGTCTAC
CTCTACCCCGACGGCAAGAACGCCGAGGACAACTCCAACTACGTCTCCGTTTTCGTCGCC
CTCGCTTCCGACGGCATCGACGTCCGAGCCCTCTTCGAGCTCACCCTCCTCGACCAGTCC
GGCCGCGGCTGCCACAAGGTTCACTCGCACTTTGACCGCTCGCTCAAGTTCGGCCCATAC
ACCCTCAAGTACAGGGGATCCATGTGGGGTTACAAGCGCTTCTACAAAAGAACACTCTTG
GAAGAATCTGATTTCTTAAAGAATGATTGCCTAGTGATGAACTGCACAGTAGGTGTTGTC
AAGAACCGTATAGAAACACCAAAGGACATCCAGATTCATGTTCCACGATCAGACATGGGC
CGCTGCTTCAAGGAGCTCCTCAGCCGCTGCATTGGATGTGACATAACATTCGAAGTGCGA
GATGAGAAAGTCAGGGCACACAAGTGGATTCTTGCTGCTCGCTCCCCAGTATTTAAAGCC
CAGTTCTTTGGTCCTATTGGAAAGCCTGACCTGCACACGGTTGTTGTGGAGGATGTGGAA
CCTGTTGTCTTCAAGGCAATGGTGAACTTCATTTACGCTGATGAACTCCCCAGCATTCCT
GAGCTAGCTGGGTCTGCCTCAACGTGGACATCAACAGTAGTAGTACAGCATTTGTTGGCA
GCAGCTGATAGATATGGACTGGTCCGTCTGCGTATCCTGTGTGAATCAAAGCTCTGTGAT
GAACTGACTCCTGAAACTGTCGCAACAACTTTAGCCCTTGCTGAACAGCACCATTGTGCT
GAGCTGAAGTCTGCATGTCTAAAGTTCATTGCTTTGCGAGGAAATTTGGGAGCTGTTATG
GAGACGGAAGGCTTTGATTACCTGGAGGATACATGCCCGTCCCTACTATCTGACTTGTTA
GCTACTGTGGCAGTCGTGGACGACGATCTTGCATCCCTTAACCGAAAAAGGGGAGTCAGC
GGGAACCAAGTCATGGCTCTAGTGGGAAGCGTTGAAAGGCGCACCCGGAGGAAGCTTTAG

Peptide Sequence

PEP ID

Zm00001d007888_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:241783640:241790905:-1 gene:Zm00001d007888 transcript:Zm00001d007888_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:math-btb14 description:BTB/POZ and MATH domain-containing protein 3
Sequence

MAIPPRTPSPPPSWSRSVTETVRGSHQFTVRGYSLAKGMGPGRYLASDVFAVGGYHWAVY
LYPDGKNAEDNSNYVSVFVALASDGIDVRALFELTLLDQSGRGCHKVHSHFDRSLKFGPY
TLKYRGSMWGYKRFYKRTLLEESDFLKNDCLVMNCTVGVVKNRIETPKDIQIHVPRSDMG
RCFKELLSRCIGCDITFEVRDEKVRAHKWILAARSPVFKAQFFGPIGKPDLHTVVVEDVE
PVVFKAMVNFIYADELPSIPELAGSASTWTSTVVVQHLLAAADRYGLVRLRILCESKLCD
ELTPETVATTLALAEQHHCAELKSACLKFIALRGNLGAVMETEGFDYLEDTCPSLLSDLL
ATVAVVDDDLASLNRKRGVSGNQVMALVGSVERRTRRKL

Transcript Sequence

Transcript ID

Zm00001d007888_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:241783640:241790905:-1 gene:Zm00001d007888 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:math-btb14 description:BTB/POZ and MATH domain-containing protein 3
Sequence

CCGGATGCAAATAATTTTTTTCCGCCAAAGCCAGGATTCCTCTGCTCTTCCTGTTTAGGG
TTTCCCCCTCTCTCTGCTCCTGCCGGATGCGATGGCGATTCCGCCGCGGACTCCTTCCCC
GCCGCCATCGTGGTCGCGCTCTGTAACCGAGACCGTTCGGGGGTCCCACCAGTTCACCGT
ACGGGGCTACTCCCTCGCCAAGGGCATGGGCCCCGGCCGCTACCTCGCCAGCGACGTCTT
CGCCGTCGGAGGATACCACTGGGCCGTCTACCTCTACCCCGACGGCAAGAACGCCGAGGA
CAACTCCAACTACGTCTCCGTTTTCGTCGCCCTCGCTTCCGACGGCATCGACGTCCGAGC
CCTCTTCGAGCTCACCCTCCTCGACCAGTCCGGCCGCGGCTGCCACAAGGTTCACTCGCA
CTTTGACCGCTCGCTCAAGTTCGGCCCATACACCCTCAAGTACAGGGGATCCATGTGGGG
TTACAAGCGCTTCTACAAAAGAACACTCTTGGAAGAATCTGATTTCTTAAAGAATGATTG
CCTAGTGATGAACTGCACAGTAGGTGTTGTCAAGAACCGTATAGAAACACCAAAGGACAT
CCAGATTCATGTTCCACGATCAGACATGGGCCGCTGCTTCAAGGAGCTCCTCAGCCGCTG
CATTGGATGTGACATAACATTCGAAGTGCGAGATGAGAAAGTCAGGGCACACAAGTGGAT
TCTTGCTGCTCGCTCCCCAGTATTTAAAGCCCAGTTCTTTGGTCCTATTGGAAAGCCTGA
CCTGCACACGGTTGTTGTGGAGGATGTGGAACCTGTTGTCTTCAAGGCAATGGTGAACTT
CATTTACGCTGATGAACTCCCCAGCATTCCTGAGCTAGCTGGGTCTGCCTCAACGTGGAC
ATCAACAGTAGTAGTACAGCATTTGTTGGCAGCAGCTGATAGATATGGACTGGTCCGTCT
GCGTATCCTGTGTGAATCAAAGCTCTGTGATGAACTGACTCCTGAAACTGTCGCAACAAC
TTTAGCCCTTGCTGAACAGCACCATTGTGCTGAGCTGAAGTCTGCATGTCTAAAGTTCAT
TGCTTTGCGAGGAAATTTGGGAGCTGTTATGGAGACGGAAGGCTTTGATTACCTGGAGGA
TACATGCCCGTCCCTACTATCTGACTTGTTAGCTACTGTGGCAGTCGTGGACGACGATCT
TGCATCCCTTAACCGAAAAAGGGGAGTCAGCGGGAACCAAGTCATGGCTCTAGTGGGAAG
CGTTGAAAGGCGCACCCGGAGGAAGCTTTAGTAGCTGGCTTCCCTAGAGGGAGACTGTAG
TTGACAACGATTTGATTTGGACGCTGGTAGCTGTGAATAATATCGTATCCAGATGATTTT
TTTTTTTTTTTTGCAGAAGCAGAAGTTGTAAATTTTTTGAATTGAATGCCTTTTTTTTTC
CTGTTTGGGACCCTTCCTTACGTAAAGTTCTAGCTTTTATACTGTTTT