Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007877_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:241567182:241571836:-1 gene:Zm00001d007877 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0090
Sequence

ATGGCCGCCGCTCGCGCACGGGTGCTGCGCGAGCTGCCGGCAAGGTGCTGGACGAAATGC
CTCCGCCGCGCTTCCCCTTTCCCCTCCACCTCGCCCGCCGCCTCCTCGCTCTCCAGCCTC
AGCCGTGCTTCCACGTCTCCCTTTCCGCTCGCCTCTCGCTCCCGGCGCCTTCTACACTCG
CTGCCCTCGGCGGCGGTGCGCGTGCGCGTGCGCGCGCAGCTGCAGACGCGCTTCTTGGCG
AGCGAAGCCGCGCGGGGCGGTGTCGGCGGGCGCGGGCCAGCAGCGGACAGCGAGGAGGAG
GCGCAGGAGTGGGCGGTGGAGTGGGAGGACAGCGAGGACGACGGCTACGAGCCCGAGATC
GGCGACGGCGGGGACGGCGGCGGGGTCGCGCTGCGGGGCGTCGGTTGGGGCGAGCGTGCC
CTCGTGGCGGCCGAGGAGGTTCTCGCCGGCCATTTTGGGGATGACATCGCAATGTTCGCC
TTCAAGTGCCAAACATTTTCTTTGCCTTCTTTCATGGGAATTTATAGGTACGGGTGCCCT
GACATCGAGGAAATAGAGAAATTCAATAGACTCTACAAGCAGAAACTGGATGAGATCGTC
GAAAGAGGCGAAATATCCCTGGACCTGGCACTCGAGGCAAGGCTACCTAAACCGAAATGT
AAACCAAGGACGCATCTGCAGCTCAATACCTGCTCACAGAAAAGTTTTGGTCGTCTGCAG
GTATCATCGCCAGGCGCAGAGAGGCTTCTGAAGGTGCCTGAGGATCTGGACCGCTTCAAG
GACATGGCTATGAGGGTGCAGTACCTCGCTGAAGGCAACAGTGACCTTGCGTCGAAGCAG
AGCCTGCTGAAGGACGGCATCTTCTTGCTCGAGTCCGTTAACGCTGAGGCTGGGCACTGT
GTTTGGAGGCTGGCAGATGTGAAGGAAAACCGAGCAGAAGCTGGGAAGGGAAGGCCGCTG
AACAGGAAACAGAGAGACTGGAGGCTGCAGACTTGCTTCACCGCAGTGAAGAAGGTGACC
TTGTACTTGGACGCCAACTAG

Peptide Sequence

PEP ID

Zm00001d007877_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:241567182:241571836:-1 gene:Zm00001d007877 transcript:Zm00001d007877_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0090
Sequence

MAAARARVLRELPARCWTKCLRRASPFPSTSPAASSLSSLSRASTSPFPLASRSRRLLHS
LPSAAVRVRVRAQLQTRFLASEAARGGVGGRGPAADSEEEAQEWAVEWEDSEDDGYEPEI
GDGGDGGGVALRGVGWGERALVAAEEVLAGHFGDDIAMFAFKCQTFSLPSFMGIYRYGCP
DIEEIEKFNRLYKQKLDEIVERGEISLDLALEARLPKPKCKPRTHLQLNTCSQKSFGRLQ
VSSPGAERLLKVPEDLDRFKDMAMRVQYLAEGNSDLASKQSLLKDGIFLLESVNAEAGHC
VWRLADVKENRAEAGKGRPLNRKQRDWRLQTCFTAVKKVTLYLDAN

Transcript Sequence

Transcript ID

Zm00001d007877_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:241567182:241571836:-1 gene:Zm00001d007877 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0090
Sequence

ATGGCCGCCGCTCGCGCACGGGTGCTGCGCGAGCTGCCGGCAAGGTGCTGGACGAAATGC
CTCCGCCGCGCTTCCCCTTTCCCCTCCACCTCGCCCGCCGCCTCCTCGCTCTCCAGCCTC
AGCCGTGCTTCCACGTCTCCCTTTCCGCTCGCCTCTCGCTCCCGGCGCCTTCTACACTCG
CTGCCCTCGGCGGCGGTGCGCGTGCGCGTGCGCGCGCAGCTGCAGACGCGCTTCTTGGCG
AGCGAAGCCGCGCGGGGCGGTGTCGGCGGGCGCGGGCCAGCAGCGGACAGCGAGGAGGAG
GCGCAGGAGTGGGCGGTGGAGTGGGAGGACAGCGAGGACGACGGCTACGAGCCCGAGATC
GGCGACGGCGGGGACGGCGGCGGGGTCGCGCTGCGGGGCGTCGGTTGGGGCGAGCGTGCC
CTCGTGGCGGCCGAGGAGGTTCTCGCCGGCCATTTTGGGGATGACATCGCAATGTTCGCC
TTCAAGTGCCAAACATTTTCTTTGCCTTCTTTCATGGGAATTTATAGGTACGGGTGCCCT
GACATCGAGGAAATAGAGAAATTCAATAGACTCTACAAGCAGAAACTGGATGAGATCGTC
GAAAGAGGCGAAATATCCCTGGACCTGGCACTCGAGGCAAGGCTACCTAAACCGAAATGT
AAACCAAGGACGCATCTGCAGCTCAATACCTGCTCACAGAAAAGTTTTGGTCGTCTGCAG
GTATCATCGCCAGGCGCAGAGAGGCTTCTGAAGGTGCCTGAGGATCTGGACCGCTTCAAG
GACATGGCTATGAGGGTGCAGTACCTCGCTGAAGGCAACAGTGACCTTGCGTCGAAGCAG
AGCCTGCTGAAGGACGGCATCTTCTTGCTCGAGTCCGTTAACGCTGAGGCTGGGCACTGT
GTTTGGAGGCTGGCAGATGTGAAGGAAAACCGAGCAGAAGCTGGGAAGGGAAGGCCGCTG
AACAGGAAACAGAGAGACTGGAGGCTGCAGACTTGCTTCACCGCAGTGAAGAAGGTGACC
TTGTACTTGGACGCCAACTAG