Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007862_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:241117701:241125512:-1 gene:Zm00001d007862 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pangloss2 description: pangloss2
Sequence	ATGGGGCTTCGCGCGGGTTTCCTCCTCCTGCCGCCGCCGCCGCTCCTCCTCCTCCTCCTC CTCCTCCTGCTGCTCATTTCCCCTGCGCGTGGGCAGCTGCCCTCGCAGGACATCCTGGCG CTGCTGGCCTTCAAGAAGGGCATCACGCACGACCCGGCGGGCTACGTCACCGACTCCTGG AACGAGGAGTCCATCGACTTCAACGGGTGCCCGGCGTCCTGGAACGGCGTCGTGTGCAAC GGCGCCAGCGTGGCCGGGGTCGTGCTGGACGGCCACGGCATCTCGGGCGTCGCCGACCTC TCCGTGTTCGCCAACCTCACCATGCTCGTCAAGCTCTCTCTGGCCGGCAACAACCTCTCG GGCGGCCTCCCCGGCAACGTGGCCAGCCTCAAGAGCCTCAAGTTCATGGACGTCTCCCGC AACCGCTTCTCGGGGCCGGTGCCGGACGGCATCGGCAACCTCCGGAGCCTGCAGAACCTG TCGCTCGCCGGGAACAACTTCTCGGGCCCGCTGCCGGAGTCCGTCGGCGGGCTCATGTCG CTCCAGTCGCTCGACGTGAGCGGCAATTCTCTGTCTGGCCCGCTGCCTGCAGGGCTGAAG GGGATGAAGAGCTTGGTCGCGCTGAACGCGTCCTACAATGCCTTCACGAAGGGCATCCCT TCTGGGCTTGGGCTCCTCGTGAACCTGCAGTCCTTGGATCTGAGCTGGAACCAGTTGGAT GGTGGTGTTGATTGGAAGTTCTTGATCGAGTCCGCTGTCGCTCATGTTGACTTCAGCGGG AACCTGCTCACCAGTACCACGCCCAAAGAGCTCAAGTTTCTGGCCGACATTTCAGAGACG GTTCTGTATCTCAACCTGAGCAACAATAAGCTGACTGGGTCATTGATAGACGGTGTCGAG CTCTCTACTTTCGGGAGGCTCAAGGTGCTTGATCTCAGCAATAATCAGCTATCTGGTGAC CTCCCAGGGTTCAATTATGTTTACGATCTTGAAGTTTTGCGACTCGCAAACAATGCATTC ACTGGATTTGTGCCTAGTGGGCTTCTCAAGGGTGATTCTCTGGTCCTAAGCGAGCTGGAC CTAAGCGCTAATAACCTGACAGGGCATATCAATATGATCACATCAACTACTTTGCAAGTC CTTAACCTGTCCTCGAATGCCCTTTTTGGGGATCTTCCATTGCTTGCTGGGAGCTGCACT GTGTTAGATCTTTCAAACAACAAGTTCAGAGGAAATCTATCAGTTATTGCCAAATGGGCC AGCGATTTGGAATATGTTGACCTTAGTCAGAACAACCTAACCGGTCCAGTTCCTGATGCG AGCTCACAGTTCCTTCGCCTAAACTACCTAAACCTTTCCCGCAACTCTCTATCCGAGACC ATCCCTGAAGCTATTGCTCAGTACCCCAAACTTACCGTGCTTGATCTGAGCTCCAATCAG TTACGTGGTCCTATGCCTGCTAATTTGCTAACTTCGTCCATGCTGCAAGAACTCTACATC CGAGATAACATGCTTTTTGGTGGCCTATCCTTTCCTGGTTCCTCATCCAAAAATTTGAGT CTCCAGGTGCTTGATATCTCTGGGAATCGCTTCAATGGAAGCCTCCCTGATGATATTGCC TCCTTATCTGGCCTCCGAGTTCTCGACATCTCAACAAACAATTTCTCTGGCCCACTACCT GCTGCTGTGAGTAAGCTTGGAGCTCTCACTGATATTGATATATCAACGAATCAGTTCACG GGGCCATTGCCTGAGGATCTTCCGGATAACCTCCAATCCTTCAATGCATCCTATAACGAC CTTTCCGGTGTCGTGCCAGAGAACCTGAGGAAGTTTCCAGAATCTTCTTTCCATCCTGGG AACTCAAAGTTAGAATATCCTGCTAGCTCGTCTGGATCTGGCAGTTCCCCATCTGGGTCA GCAGGTGGAAAATCACTCAGTACAGGTGCTAAAGCAGCAATCGTAGCAGCTAGCATTGTT CTTCTTGTCATCCTCATACTTATTGCCATTGTATGCCACTACAAGAGGATCTCACGGCAG TTTTCTAGCTCTGAAAAGGTTTCAGACAAGAGCCTCCACAGGACCACTAAAGACAGTGCT GTCATGCAAGGAAAGGACAACAAAGGTGGTTTGGTGTCAGCAGATGAGCTTGCCACTCCT CGAAAAGGGTCTACATCTGAAGCACTCAGCCAGGAAGAGAAGTCAGCCGCGGGGGGCTTC TCGCCGTCCAAGGGCAGCCGGTTCTCGTGGTCACCGGACTCTGGAGAGGCATATGGGCAG GAAGGGCTGGCGCGGCTGGACGTGAGGTCGCCTGACAGGCTAGCGGGGGAGCTGCATTTC CTGGACGAGACGATCACGCTGACGCCAGAGGAGCTTTCGAGGGCGCCGGCTGAAGTCCTA GGCAGGAGCAGCCACGGGACTTCGTACCGGGCGACACTGGAGAATGGCGTGTTCCTGACC GTGAAGTGGCTGAGGGAAGGCGTCGCGAGGCCCAAGAAGGAGTTCGCGAAGGAGGCCAAG AAGTTCGCAAACATCCGGCATCCGAACGTGGTTGGCTTGCGTGGGTACTACTGGGGCCCG ACCCCGCATGAGAAGCTCATCTTGTCGGATTACGTCGCTCCGGGGAGTCTTTGCCATCAT CATCTTCTTCTTCTACTACTACTGCTGATTAGTTGTTTCTGCAGATGCCTTGATGTCACT AGCGGTTCTGATTGTGCAGATCGACCAGGAAGAAGAGGTCCTCCACTGACCTGGGCGCAG CGGCTGAAGATCGCGGTGGACGTGGCGCGCGGCCTCAACTACCTCCACTTCGACCGCGCG ATGCCCCACGGGAACCTCAAGGCCACCAACGTCCTGCTGGACGGGCTGGACCTGAACGCC CGCGTGGCCGACTACTGCCTGCACCGCCTGATGACGCAGTCGGGCGTGGCGGAGCAGATC CTGGACCTAGGCGTGCTGGGCTACCGCGCCCCGGAGCTGGCCGCGTCCAAGAAGCCGGCG CCCTCGTTCAAGGCCGACGTGTACGCCTTCGGCGTCGCGCTGCTGGAGCTCCTGACGGGC CGGTGCGCCGGGGACGTCGTCTCGGGGCCCGAGGGCGCCGCAGGCGTCGACCTCACCGAC TGGGTCCGGCTGCGCGTGGCGGAAGGGCGGGGGTCCGACTGCTTCGACGCCGCCATGGCC TCGGACTCTGAGAGCAACCCGCAGGCTGTGAAGGGCATGAAGGAGGCCCTGGGCATTGCG CTGCGGTGCATCAGGCCGGTCTCCGAGAGGCCGGGGATCAAATCTGTGTACGAGGATCTT TCGTCGATCTAG

Peptide Sequence

PEP ID	Zm00001d007862_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:241117701:241125512:-1 gene:Zm00001d007862 transcript:Zm00001d007862_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pangloss2 description: pangloss2
Sequence	MGLRAGFLLLPPPPLLLLLLLLLLLISPARGQLPSQDILALLAFKKGITHDPAGYVTDSW NEESIDFNGCPASWNGVVCNGASVAGVVLDGHGISGVADLSVFANLTMLVKLSLAGNNLS GGLPGNVASLKSLKFMDVSRNRFSGPVPDGIGNLRSLQNLSLAGNNFSGPLPESVGGLMS LQSLDVSGNSLSGPLPAGLKGMKSLVALNASYNAFTKGIPSGLGLLVNLQSLDLSWNQLD GGVDWKFLIESAVAHVDFSGNLLTSTTPKELKFLADISETVLYLNLSNNKLTGSLIDGVE LSTFGRLKVLDLSNNQLSGDLPGFNYVYDLEVLRLANNAFTGFVPSGLLKGDSLVLSELD LSANNLTGHINMITSTTLQVLNLSSNALFGDLPLLAGSCTVLDLSNNKFRGNLSVIAKWA SDLEYVDLSQNNLTGPVPDASSQFLRLNYLNLSRNSLSETIPEAIAQYPKLTVLDLSSNQ LRGPMPANLLTSSMLQELYIRDNMLFGGLSFPGSSSKNLSLQVLDISGNRFNGSLPDDIA SLSGLRVLDISTNNFSGPLPAAVSKLGALTDIDISTNQFTGPLPEDLPDNLQSFNASYND LSGVVPENLRKFPESSFHPGNSKLEYPASSSGSGSSPSGSAGGKSLSTGAKAAIVAASIV LLVILILIAIVCHYKRISRQFSSSEKVSDKSLHRTTKDSAVMQGKDNKGGLVSADELATP RKGSTSEALSQEEKSAAGGFSPSKGSRFSWSPDSGEAYGQEGLARLDVRSPDRLAGELHF LDETITLTPEELSRAPAEVLGRSSHGTSYRATLENGVFLTVKWLREGVARPKKEFAKEAK KFANIRHPNVVGLRGYYWGPTPHEKLILSDYVAPGSLCHHHLLLLLLLLISCFCRCLDVT SGSDCADRPGRRGPPLTWAQRLKIAVDVARGLNYLHFDRAMPHGNLKATNVLLDGLDLNA RVADYCLHRLMTQSGVAEQILDLGVLGYRAPELAASKKPAPSFKADVYAFGVALLELLTG RCAGDVVSGPEGAAGVDLTDWVRLRVAEGRGSDCFDAAMASDSESNPQAVKGMKEALGIA LRCIRPVSERPGIKSVYEDLSSI

Transcript Sequence

Transcript ID	Zm00001d007862_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:241117701:241125512:-1 gene:Zm00001d007862 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pangloss2 description: pangloss2
Sequence	AGGGTTAGGGTTCGTTCCGCCGCGGCTGCCGTCTTCCCCAGGGCAGGCTACTCCCGCCGG GCCCCTCCCCTCCCATTGCATTCCCCAGTTCCCCTGCAACCCCCCCATTACCCTTTCTCC CACCCATTCCTTCCTTCCGCCCCTCTCCAGGCCGCCCGGACTGGTCGCGTTGCAAGGTTT GTTTGAAGGAATCTGGACGGGTTTATGTCGATACTAGGTGCTGCTGCTGCTGCTGCAGAG ATCAGGTGAAAGGGACAAGTGTTGTGGCTGCGCAATTAGTACCCAGAGTGTGCACAGCCA TACCACCTCGCTGATAGCTACTACCCGCCTGTGCGCACGCTGCCTCCAATCTCCTCCAAG AAATGCGTCCTCGTCCTTGAATCCTACTAACCATCAAACTCCCAGCTCCCCTCCCAGACC AGTCCGTGGAGGAAAGTGAGCGATGGGGCTTCGCGCGGGTTTCCTCCTCCTGCCGCCGCC GCCGCTCCTCCTCCTCCTCCTCCTCCTCCTGCTGCTCATTTCCCCTGCGCGTGGGCAGCT GCCCTCGCAGGACATCCTGGCGCTGCTGGCCTTCAAGAAGGGCATCACGCACGACCCGGC GGGCTACGTCACCGACTCCTGGAACGAGGAGTCCATCGACTTCAACGGGTGCCCGGCGTC CTGGAACGGCGTCGTGTGCAACGGCGCCAGCGTGGCCGGGGTCGTGCTGGACGGCCACGG CATCTCGGGCGTCGCCGACCTCTCCGTGTTCGCCAACCTCACCATGCTCGTCAAGCTCTC TCTGGCCGGCAACAACCTCTCGGGCGGCCTCCCCGGCAACGTGGCCAGCCTCAAGAGCCT CAAGTTCATGGACGTCTCCCGCAACCGCTTCTCGGGGCCGGTGCCGGACGGCATCGGCAA CCTCCGGAGCCTGCAGAACCTGTCGCTCGCCGGGAACAACTTCTCGGGCCCGCTGCCGGA GTCCGTCGGCGGGCTCATGTCGCTCCAGTCGCTCGACGTGAGCGGCAATTCTCTGTCTGG CCCGCTGCCTGCAGGGCTGAAGGGGATGAAGAGCTTGGTCGCGCTGAACGCGTCCTACAA TGCCTTCACGAAGGGCATCCCTTCTGGGCTTGGGCTCCTCGTGAACCTGCAGTCCTTGGA TCTGAGCTGGAACCAGTTGGATGGTGGTGTTGATTGGAAGTTCTTGATCGAGTCCGCTGT CGCTCATGTTGACTTCAGCGGGAACCTGCTCACCAGTACCACGCCCAAAGAGCTCAAGTT TCTGGCCGACATTTCAGAGACGGTTCTGTATCTCAACCTGAGCAACAATAAGCTGACTGG GTCATTGATAGACGGTGTCGAGCTCTCTACTTTCGGGAGGCTCAAGGTGCTTGATCTCAG CAATAATCAGCTATCTGGTGACCTCCCAGGGTTCAATTATGTTTACGATCTTGAAGTTTT GCGACTCGCAAACAATGCATTCACTGGATTTGTGCCTAGTGGGCTTCTCAAGGGTGATTC TCTGGTCCTAAGCGAGCTGGACCTAAGCGCTAATAACCTGACAGGGCATATCAATATGAT CACATCAACTACTTTGCAAGTCCTTAACCTGTCCTCGAATGCCCTTTTTGGGGATCTTCC ATTGCTTGCTGGGAGCTGCACTGTGTTAGATCTTTCAAACAACAAGTTCAGAGGAAATCT ATCAGTTATTGCCAAATGGGCCAGCGATTTGGAATATGTTGACCTTAGTCAGAACAACCT AACCGGTCCAGTTCCTGATGCGAGCTCACAGTTCCTTCGCCTAAACTACCTAAACCTTTC CCGCAACTCTCTATCCGAGACCATCCCTGAAGCTATTGCTCAGTACCCCAAACTTACCGT GCTTGATCTGAGCTCCAATCAGTTACGTGGTCCTATGCCTGCTAATTTGCTAACTTCGTC CATGCTGCAAGAACTCTACATCCGAGATAACATGCTTTTTGGTGGCCTATCCTTTCCTGG TTCCTCATCCAAAAATTTGAGTCTCCAGGTGCTTGATATCTCTGGGAATCGCTTCAATGG AAGCCTCCCTGATGATATTGCCTCCTTATCTGGCCTCCGAGTTCTCGACATCTCAACAAA CAATTTCTCTGGCCCACTACCTGCTGCTGTGAGTAAGCTTGGAGCTCTCACTGATATTGA TATATCAACGAATCAGTTCACGGGGCCATTGCCTGAGGATCTTCCGGATAACCTCCAATC CTTCAATGCATCCTATAACGACCTTTCCGGTGTCGTGCCAGAGAACCTGAGGAAGTTTCC AGAATCTTCTTTCCATCCTGGGAACTCAAAGTTAGAATATCCTGCTAGCTCGTCTGGATC TGGCAGTTCCCCATCTGGGTCAGCAGGTGGAAAATCACTCAGTACAGGTGCTAAAGCAGC AATCGTAGCAGCTAGCATTGTTCTTCTTGTCATCCTCATACTTATTGCCATTGTATGCCA CTACAAGAGGATCTCACGGCAGTTTTCTAGCTCTGAAAAGGTTTCAGACAAGAGCCTCCA CAGGACCACTAAAGACAGTGCTGTCATGCAAGGAAAGGACAACAAAGGTGGTTTGGTGTC AGCAGATGAGCTTGCCACTCCTCGAAAAGGGTCTACATCTGAAGCACTCAGCCAGGAAGA GAAGTCAGCCGCGGGGGGCTTCTCGCCGTCCAAGGGCAGCCGGTTCTCGTGGTCACCGGA CTCTGGAGAGGCATATGGGCAGGAAGGGCTGGCGCGGCTGGACGTGAGGTCGCCTGACAG GCTAGCGGGGGAGCTGCATTTCCTGGACGAGACGATCACGCTGACGCCAGAGGAGCTTTC GAGGGCGCCGGCTGAAGTCCTAGGCAGGAGCAGCCACGGGACTTCGTACCGGGCGACACT GGAGAATGGCGTGTTCCTGACCGTGAAGTGGCTGAGGGAAGGCGTCGCGAGGCCCAAGAA GGAGTTCGCGAAGGAGGCCAAGAAGTTCGCAAACATCCGGCATCCGAACGTGGTTGGCTT GCGTGGGTACTACTGGGGCCCGACCCCGCATGAGAAGCTCATCTTGTCGGATTACGTCGC TCCGGGGAGTCTTTGCCATCATCATCTTCTTCTTCTACTACTACTGCTGATTAGTTGTTT CTGCAGATGCCTTGATGTCACTAGCGGTTCTGATTGTGCAGATCGACCAGGAAGAAGAGG TCCTCCACTGACCTGGGCGCAGCGGCTGAAGATCGCGGTGGACGTGGCGCGCGGCCTCAA CTACCTCCACTTCGACCGCGCGATGCCCCACGGGAACCTCAAGGCCACCAACGTCCTGCT GGACGGGCTGGACCTGAACGCCCGCGTGGCCGACTACTGCCTGCACCGCCTGATGACGCA GTCGGGCGTGGCGGAGCAGATCCTGGACCTAGGCGTGCTGGGCTACCGCGCCCCGGAGCT GGCCGCGTCCAAGAAGCCGGCGCCCTCGTTCAAGGCCGACGTGTACGCCTTCGGCGTCGC GCTGCTGGAGCTCCTGACGGGCCGGTGCGCCGGGGACGTCGTCTCGGGGCCCGAGGGCGC CGCAGGCGTCGACCTCACCGACTGGGTCCGGCTGCGCGTGGCGGAAGGGCGGGGGTCCGA CTGCTTCGACGCCGCCATGGCCTCGGACTCTGAGAGCAACCCGCAGGCTGTGAAGGGCAT GAAGGAGGCCCTGGGCATTGCGCTGCGGTGCATCAGGCCGGTCTCCGAGAGGCCGGGGAT CAAATCTGTGTACGAGGATCTTTCGTCGATCTAGCTAGTCGGTAGCGCTAGCCTCGTCGC GTAGGCGTAGCTTTTAGATTAACACTGCGTGTTAAAATTGTGTGCGTGTTCGTCTTGAAC TCGTAGAACTGCGTAGCGAATCCAAGTGTTATTATGGCCTCACCTTGATGCCAGCAAT