Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007769_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:2:239289838:239296367:1 gene:Zm00001d007769 gene_biotype:protein_coding transcript_biotype:protein_coding description:DDT domain-containing protein DDR4
Sequence	ATGGCTTCCACCTCCGCCTCCTCGGCCCCCGTCTCCCCCTCCCACCCAAACCCTAACCCT ACCCCCGACGCAGATCTCCCATCTGATCGCCCCATGCCCGACGCCGACGGCGGAAGTGGA GGCGCCTCGCCCGCTTCCCCGGAGAAGCGGGAGGAGGAGGAGGAGGTGCCGGGGGAGGTG GCGGCGGCGGCGGCGGCCGTGGAGCAGCCGACCCCGCGGAAGACGCGCCTTCCGCGTGCT TGCAACAACAAGCCCAAACCTCCTCCTCCGCCGCCGCCGCCCGAGCGTCCGCGCCGCCGT GCCGCGGCGGCGGGCGGCGCGGACGAGACGCCGCAATGCCGCGTGGTCACGCCGCTCGTG TCGGAGCCCGAGGCGCCCGCGGAGCTGCCCCGCTGGCGGCTCCGCTGCATGTGGGAGCTC GGCTCCGTCCTCAACTTCCTCCACGTGTTCCGGCCTCTGCTGAACATCACTGGTGATTTC ACGGCTGAGGAGCTCGAGGTGGCGCTTATCACTCCCAACGAGATTCTAGATGATGTGCAT ATGCCACTGCTAAAGTCAATTCCTCCTGTAACTCGCATGGCTATGGGACGTGGAACCTGG GTGACTGTCCTGTGCAGAAAGCTGAAGGATTGGTGGCATTGGGTTGCAGAAGGTGATCTG CCAATTGTTGCATCTCATGGAACTGAAATTGAGACGTACAAAACTATAGAACCAGCTATT CGTTTACTAATCTTGAAAGCGATATGTGATATCCGTGTTGAGCAAGAGGATATTCGGAAC TTCATTGACAGTTCTCTTAAGCATGGACAGAACTTTTCTACCTTTCGTAAAGATCGGATT GGAGGGGATTCCCTTGGAATCTCATACTGGTATGAAGATGATGAGATTCTCGGGCATAGA TTGTATCGTGAAATTAGACGAGTAGAGCAGGTCAAGAAGGAGCCAGGAAAGAGGTCTAGG GGAAAAGGAGGATCTTCAGCTATTTCAGTCGTGTCCTACCAGTGGGAAACTGTTGCGTCC ACTTTCGACGAGTTTGATGATGTGGCAGAAAAACTCTTTTCAAGTCGGAACAGGACAGAG GTTTCACTTGGAAAGAAGCTGAAGATTGAATATCTTCCAGAGATAGAAAAGATCCATAAA AAGAAAGAGAGGTTGCTCAAAAAGCAACAGAGAGAAGCTCTCCTTCTTGATAGCTACTTG ACATCAGATGGACTTACCACCGGCCGTTCTCTCCGTGATAGAAAGCCCGTGACTTATACA TTTGGTTTGAATTTGTCATACAATGCAGATGACTATGATCGCTCAATAAATGAAGCCATC AAAATTACGAAAAAAAGAGAGGAGAACTCAGCTGAGCCTGTTGCTACTACTGCCAATAGA AGGGTGCTTCCTCCAAGAGCGGAGGCAGCAAGCAATGGGAAGCTAAATAATGGTCCCTCA CCAACAACCAACGACTCGGATGATGGAAATTCTTCAAAATCAGATGACGACCGAGACAGC GACGGTGAACAAGAAAATGAGGCACTTGATCGCAGCAACCGGAGGAGGAAAAGATCTCAG AGATACACACAGGACTTTGTTGAGGCTGTCTCGGATATTGATCCTAACTTTGACAGTGAC GACGATATCATGGGAGAAGCAGTGTATGATGAGGAATATCTGAGAAGTCGCAAACAGAAT AAGACATCAAGCGCTTCTGAAGAGGATGAGGAGTTCCGGTTGGAAGAAGATGGTGAAGAT GATGATGAAGAAGAGGAATATTCATTGAGTACCAGTGAAGATCTAGAGGAGCCGCAACGG CATAAAAAATTGGAAACTCGTGGCCGGCGAGGTACCAAGCTGAGGTCAGTTGATGAAATC CAAACAGGTCTCAGACGCAGCAAGCGTTCTTCTCGTCCTCGTATTAACTATCACCAATAT GATTTTTCTGACTCGGATACGGGGCCTGGAAAGGCAAAGAAATCTGATGCATCAGATTCT GAAGCTGGCTCTGATGCCGAGAATGATATGGAGCTCTCGACATCGAGTCAAGAGGGAGAG GAAGAAGAGGATGATAGTCATGATGAAGAAAATGGTAATAATGTGAATGATAAAATGGAT GAGGACCACACCGTGGCAGAAAATAAAGTAGAACCAGAGGAGGAGGAGCAGAAGGAGCAG CCGCCTATAGAGAAGATGGATGCTCCCAGCACGGAAAGTAGACGTGTAGGAAGAACATTC CTAGATCTAAACGAGCTTGCACCTGGAGGTGGCTTTGATGAGAGCCCAAGCTTGACAGTG AAAGATGACATAGACAACATTTAG

Peptide Sequence

PEP ID	Zm00001d007769_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:2:239289838:239296367:1 gene:Zm00001d007769 transcript:Zm00001d007769_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:DDT domain-containing protein DDR4
Sequence	MASTSASSAPVSPSHPNPNPTPDADLPSDRPMPDADGGSGGASPASPEKREEEEEVPGEV AAAAAAVEQPTPRKTRLPRACNNKPKPPPPPPPPERPRRRAAAAGGADETPQCRVVTPLV SEPEAPAELPRWRLRCMWELGSVLNFLHVFRPLLNITGDFTAEELEVALITPNEILDDVH MPLLKSIPPVTRMAMGRGTWVTVLCRKLKDWWHWVAEGDLPIVASHGTEIETYKTIEPAI RLLILKAICDIRVEQEDIRNFIDSSLKHGQNFSTFRKDRIGGDSLGISYWYEDDEILGHR LYREIRRVEQVKKEPGKRSRGKGGSSAISVVSYQWETVASTFDEFDDVAEKLFSSRNRTE VSLGKKLKIEYLPEIEKIHKKKERLLKKQQREALLLDSYLTSDGLTTGRSLRDRKPVTYT FGLNLSYNADDYDRSINEAIKITKKREENSAEPVATTANRRVLPPRAEAASNGKLNNGPS PTTNDSDDGNSSKSDDDRDSDGEQENEALDRSNRRRKRSQRYTQDFVEAVSDIDPNFDSD DDIMGEAVYDEEYLRSRKQNKTSSASEEDEEFRLEEDGEDDDEEEEYSLSTSEDLEEPQR HKKLETRGRRGTKLRSVDEIQTGLRRSKRSSRPRINYHQYDFSDSDTGPGKAKKSDASDS EAGSDAENDMELSTSSQEGEEEEDDSHDEENGNNVNDKMDEDHTVAENKVEPEEEEQKEQ PPIEKMDAPSTESRRVGRTFLDLNELAPGGGFDESPSLTVKDDIDNI

Transcript Sequence

Transcript ID	Zm00001d007769_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:239289838:239296367:1 gene:Zm00001d007769 gene_biotype:protein_coding transcript_biotype:protein_coding description:DDT domain-containing protein DDR4
Sequence	GGAATCCCATTTTTACCCTTCTCACCTCCTCCGCTCCCTCCCATGGCTTCCACCTCCGCC TCCTCGGCCCCCGTCTCCCCCTCCCACCCAAACCCTAACCCTACCCCCGACGCAGATCTC CCATCTGATCGCCCCATGCCCGACGCCGACGGCGGAAGTGGAGGCGCCTCGCCCGCTTCC CCGGAGAAGCGGGAGGAGGAGGAGGAGGTGCCGGGGGAGGTGGCGGCGGCGGCGGCGGCC GTGGAGCAGCCGACCCCGCGGAAGACGCGCCTTCCGCGTGCTTGCAACAACAAGCCCAAA CCTCCTCCTCCGCCGCCGCCGCCCGAGCGTCCGCGCCGCCGTGCCGCGGCGGCGGGCGGC GCGGACGAGACGCCGCAATGCCGCGTGGTCACGCCGCTCGTGTCGGAGCCCGAGGCGCCC GCGGAGCTGCCCCGCTGGCGGCTCCGCTGCATGTGGGAGCTCGGCTCCGTCCTCAACTTC CTCCACGTGTTCCGGCCTCTGCTGAACATCACTGGTGATTTCACGGCTGAGGAGCTCGAG GTGGCGCTTATCACTCCCAACGAGATTCTAGATGATGTGCATATGCCACTGCTAAAGTCA ATTCCTCCTGTAACTCGCATGGCTATGGGACGTGGAACCTGGGTGACTGTCCTGTGCAGA AAGCTGAAGGATTGGTGGCATTGGGTTGCAGAAGGTGATCTGCCAATTGTTGCATCTCAT GGAACTGAAATTGAGACGTACAAAACTATAGAACCAGCTATTCGTTTACTAATCTTGAAA GCGATATGTGATATCCGTGTTGAGCAAGAGGATATTCGGAACTTCATTGACAGTTCTCTT AAGCATGGACAGAACTTTTCTACCTTTCGTAAAGATCGGATTGGAGGGGATTCCCTTGGA ATCTCATACTGGTATGAAGATGATGAGATTCTCGGGCATAGATTGTATCGTGAAATTAGA CGAGTAGAGCAGGTCAAGAAGGAGCCAGGAAAGAGGTCTAGGGGAAAAGGAGGATCTTCA GCTATTTCAGTCGTGTCCTACCAGTGGGAAACTGTTGCGTCCACTTTCGACGAGTTTGAT GATGTGGCAGAAAAACTCTTTTCAAGTCGGAACAGGACAGAGGTTTCACTTGGAAAGAAG CTGAAGATTGAATATCTTCCAGAGATAGAAAAGATCCATAAAAAGAAAGAGAGGTTGCTC AAAAAGCAACAGAGAGAAGCTCTCCTTCTTGATAGCTACTTGACATCAGATGGACTTACC ACCGGCCGTTCTCTCCGTGATAGAAAGCCCGTGACTTATACATTTGGTTTGAATTTGTCA TACAATGCAGATGACTATGATCGCTCAATAAATGAAGCCATCAAAATTACGAAAAAAAGA GAGGAGAACTCAGCTGAGCCTGTTGCTACTACTGCCAATAGAAGGGTGCTTCCTCCAAGA GCGGAGGCAGCAAGCAATGGGAAGCTAAATAATGGTCCCTCACCAACAACCAACGACTCG GATGATGGAAATTCTTCAAAATCAGATGACGACCGAGACAGCGACGGTGAACAAGAAAAT GAGGCACTTGATCGCAGCAACCGGAGGAGGAAAAGATCTCAGAGATACACACAGGACTTT GTTGAGGCTGTCTCGGATATTGATCCTAACTTTGACAGTGACGACGATATCATGGGAGAA GCAGTGTATGATGAGGAATATCTGAGAAGTCGCAAACAGAATAAGACATCAAGCGCTTCT GAAGAGGATGAGGAGTTCCGGTTGGAAGAAGATGGTGAAGATGATGATGAAGAAGAGGAA TATTCATTGAGTACCAGTGAAGATCTAGAGGAGCCGCAACGGCATAAAAAATTGGAAACT CGTGGCCGGCGAGGTACCAAGCTGAGGTCAGTTGATGAAATCCAAACAGGTCTCAGACGC AGCAAGCGTTCTTCTCGTCCTCGTATTAACTATCACCAATATGATTTTTCTGACTCGGAT ACGGGGCCTGGAAAGGCAAAGAAATCTGATGCATCAGATTCTGAAGCTGGCTCTGATGCC GAGAATGATATGGAGCTCTCGACATCGAGTCAAGAGGGAGAGGAAGAAGAGGATGATAGT CATGATGAAGAAAATGGTAATAATGTGAATGATAAAATGGATGAGGACCACACCGTGGCA GAAAATAAAGTAGAACCAGAGGAGGAGGAGCAGAAGGAGCAGCCGCCTATAGAGAAGATG GATGCTCCCAGCACGGAAAGTAGACGTGTAGGAAGAACATTCCTAGATCTAAACGAGCTT GCACCTGGAGGTGGCTTTGATGAGAGCCCAAGCTTGACAGTGAAAGATGACATAGACAAC ATTTAGGGAATAAAGTTTTTTTTGATACATTTGAGTGCTGTTGGTCAGTTTTCTGACTTC GAAGCAAGGGTGGCAGATCGATGGGTTTGAGCTTATGGCTGTTTTCATTGATTTGCAGTA ACAGGACAAGCGAGGTTCCACTTGAAGTGACTTTGAGCTTCTTCGGTGCTTATGTCATAC TCGGAGGTGCTTATGTTATACTTGGAGGCCATGAGGAGGGTAGTTTTGCTTTTGATTATG TATACTACATGACGGTCGCAATCGATCACAGCTGTATTATGGCCAGGCTGATGCTGCGTT GAGGCCGGTCTGTAGGATATAAATTTATTGCCTCCACTTATTTAGTCTTAGGCATGGTGA TGTCAATGAGATCATGGAGGGAAACCTGTACTCCGAGTGCAGTGCAGTTCGTCCGTCGGC ATTCGCGAGACCTTTTCCACTTGTAGATTGTAGGTTTTGAGACCGAGCAGGATTAGTTCT GTATCTAAATCTGACAGTCTGATTTTTTCCCCCGTCACACCTGTGACCTGTGTAGCTGAC ACTGAGCTGTCCTTGATGGAGAAGATGCTGCATGTATTGAGCTGATGTTGTAGCCTATGG ACATGTCCATTACACTGACTGAGAGTGGCTGGCCTGGACTGGAGATTGCTAATTTGCTGT ATGGTTC