Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007765_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:239267459:239269600:1 gene:Zm00001d007765 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable prolyl 4-hydroxylase 12
Sequence

ATGAGGCTCCGCGGCGTGCTGCGCCTCGTCCTCGCGCTCCTCCTCGCCGCCACCGCCATC
GTGCCGGTGCTGCTCCTTAGCGAGAACGGCGGCGGCGGCGTCGCACCTGCGCCGCCGTTC
AACTCCTCGCGTGTCAAGGCCGTCTCGTGGCATCCAAGGATCTTCGTGTACAAGGGGTTC
CTCTCCGACGCCGAGTGTGACCACCTCGTGACTCTGGCGAAGAAAAAGATCCAGCGGTCC
ATGGTGGCGGACAACGAGTCCGGCAAGAGCGTCAAGAGCGAGGTGCGCACCAGCTCCGGC
ATGTTCCTCGACAAGCGCCAGGACCCGGTGGTGAGTCGGATCGAGGAGAGGATCGCGGCA
TGGACGTTTCTTCCTCAAGAGAACGCCGAGAACATGCAGGTGCTGCGCTACGAGCCGGGG
CAGAAGTACGAGCCGCACTTCGACTACTTCCACGACAGGGTCAACCAGGCCCGCGGCGGC
CACCGCTACGCCACCGTGCTCATGTACCTGTCCACCGTCCGCGAGGGAGGCGAGACCGTG
TTCCCCAACGCCAAGGGTTGGGAGTCCCAGCCCAAGGACGCCACTTTCTCCGAGTGTGCA
CACAAAGGATTGGCAGTGAAACCGGTGAAAGGCGACGCCGTGCTCTTCTTCAGCCTGCAC
GCCGACGGCACGCCGGACCCGCTCAGCCTCCACGGGAGCTGCCCGGTGATCCGGGGCGAG
AAGTGGTCGGCGCCCAAGTGGATCCACGTCAGGTCGTACGAGGACGAACCCCAGGCAGTA
CTCGTGCTCCCCGAGGAAACCGACGGCGCGCGGGTGCGCCGATAG

Peptide Sequence

PEP ID

Zm00001d007765_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:239267459:239269600:1 gene:Zm00001d007765 transcript:Zm00001d007765_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable prolyl 4-hydroxylase 12
Sequence

MRLRGVLRLVLALLLAATAIVPVLLLSENGGGGVAPAPPFNSSRVKAVSWHPRIFVYKGF
LSDAECDHLVTLAKKKIQRSMVADNESGKSVKSEVRTSSGMFLDKRQDPVVSRIEERIAA
WTFLPQENAENMQVLRYEPGQKYEPHFDYFHDRVNQARGGHRYATVLMYLSTVREGGETV
FPNAKGWESQPKDATFSECAHKGLAVKPVKGDAVLFFSLHADGTPDPLSLHGSCPVIRGE
KWSAPKWIHVRSYEDEPQAVLVLPEETDGARVRR

Transcript Sequence

Transcript ID

Zm00001d007765_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:239267459:239269600:1 gene:Zm00001d007765 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable prolyl 4-hydroxylase 12
Sequence

GCTGCGTGGGCAGAAACCACGGGGCGGCGGTGGGCAATCCACCACCTCTCTCTCTCCAGC
AGGCCGCGCGCCGCAGTTTTCTCCCCGGGCACATGCCCGTGGGCACGCGTGCAGGCCACT
GGCCACCCCCACGCAGAAAAACCAGCGGCCGCGCGCACCGACCCGGCCGACGACTCCGGC
GACCGCGCGCACACGACAAAACCCCGGCGGCGACGACAGACCCACAGGATCAGACGACTC
AGCGAGCGGAACACCCCCTGGCGCCGGCCGTTAAAGTCAAGTCAAGCACCGGAGCCGGTG
TATAAAGCTCCGGCGACTGGTGCCCACCACGGCTAGCTGCCGTCGTCGCAGAAGTAGGAG
CTCGCGTTTCTCCATCCGTACGTCCTGCAGTAGTGATTGGGCAGCATCGTCATCGATCGA
TCGCCATGAGGCTCCGCGGCGTGCTGCGCCTCGTCCTCGCGCTCCTCCTCGCCGCCACCG
CCATCGTGCCGGTGCTGCTCCTTAGCGAGAACGGCGGCGGCGGCGTCGCACCTGCGCCGC
CGTTCAACTCCTCGCGTGTCAAGGCCGTCTCGTGGCATCCAAGGATCTTCGTGTACAAGG
GGTTCCTCTCCGACGCCGAGTGTGACCACCTCGTGACTCTGGCGAAGAAAAAGATCCAGC
GGTCCATGGTGGCGGACAACGAGTCCGGCAAGAGCGTCAAGAGCGAGGTGCGCACCAGCT
CCGGCATGTTCCTCGACAAGCGCCAGGACCCGGTGGTGAGTCGGATCGAGGAGAGGATCG
CGGCATGGACGTTTCTTCCTCAAGAGAACGCCGAGAACATGCAGGTGCTGCGCTACGAGC
CGGGGCAGAAGTACGAGCCGCACTTCGACTACTTCCACGACAGGGTCAACCAGGCCCGCG
GCGGCCACCGCTACGCCACCGTGCTCATGTACCTGTCCACCGTCCGCGAGGGAGGCGAGA
CCGTGTTCCCCAACGCCAAGGGTTGGGAGTCCCAGCCCAAGGACGCCACTTTCTCCGAGT
GTGCACACAAAGGATTGGCAGTGAAACCGGTGAAAGGCGACGCCGTGCTCTTCTTCAGCC
TGCACGCCGACGGCACGCCGGACCCGCTCAGCCTCCACGGGAGCTGCCCGGTGATCCGGG
GCGAGAAGTGGTCGGCGCCCAAGTGGATCCACGTCAGGTCGTACGAGGACGAACCCCAGG
CAGTACTCGTGCTCCCCGAGGAAACCGACGGCGCGCGGGTGCGCCGATAGGAGCGAGCGC
TGCGCGAAGTGGGCCGCGGCGGGTGAGTGCGCCTGGAACCCGGCGTACATGCTCGGCGCC
GGCGATGAGGGGGCGCCTGGGCAGTGCCGCAGGAGCTGCGGAGTCTGCGATTCGTAGGCG
CGTCCTTGCCTTTTCTTTCTTTCTTCCTTTCTTTGTTTGTTTTGGGATGCAGTATTCAGA
TAACTAGTGGCTGTTTTTCTGTACTTGATGATGATGTGTACATAGCTAGTGAAAGCTTTC
TTCAGAT