Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007745_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:238606921:238613493:-1 gene:Zm00001d007745 gene_biotype:protein_coding transcript_biotype:protein_coding description: S-receptor kinase1
Sequence

ATGTCATCACTCCTGTTGCGAGTGCTGCTCATCCAGCTTGCAGCAGTGGAGTGCCTCTCC
GCCGCGATTCCAGGCTGCCTAACGCAATGTGGAGGCGTAGAGATACCCTATCCATTCGGC
GTCGGCACCAACTGCTCCCGCAAAGGGTTCCGGATCAAGTGCATCAACGGCAGCGCGGGC
GAGGAGATTCCAGTGCTGCTACCTACTACGCGCTACCAGAACATCCGGGTGCTGAACCTG
TCCGTGTCGCCGTTGCCGGAGGCTCGAGTGCTTCTTCCGGTGGCATGGCAGTGCTTCAAC
GCCACCGGGGGCGTCACTGGGATCTACTCGGGAGATGTGGACTTCAACCCAGAGGGCGTA
TACCGCATCTCCAACACACAGAACGAGCTCTTCGTCCTCGGCTGCGACACCTATGCGTTC
ACCAAAGGCGTGAGGGTGCACAACGTTAACGCACGCTTCCCTTACAGATACTTCACGGGG
TGTATCACCGTCAGTGTAGACGACAAGGACCCGCGCGACGGTGCCTGCGCGGGCCTCGGC
TGCTGCCGCGTCGACATCCCGCCAGGCATCACGGACACCAGCATGACCTTCTCGTCTACC
TGGACGCGTGCCAACCAGACCTTCTGCCCCTGCGACTACGCCTTCATCGTGGAGAAGGGC
AACTACACCTTCAAGGCATCCGACCTTGTGTCGCACACACCCGACAACCGTCTGCCTTTG
GACTGGTGGACCATGCCACTGCGTCTCGACTGGGCCATCCGCGACAACAACGGCGACTCC
ATGACTTCCATCTCCTGCGCCCAGGCACCCAACGAACCTGACTATGGCTGCCGCAGCAAG
CATAGCGAGTGCACTAATTCAACCAATGGCCCTGGCTACTTCTGCAAGTGTGCCCATGGC
TACGACGGAAACCCCTATGTCCAGAGTGATGGTGAATGCACGAATATCAACGAGTGCCAA
GATCCAAAGTCACATAATTGTTCAAGTGGCAGCAAATGCATTGACACAGACGGAGGCTAT
TATTGTCAATGCAATTTCTTCCGAAGAGGGCAGCAATGTGATCCCTTAATTCCTATGGCT
GCCGTTGCACTGTTAACAACATTTGCTGCCGTCGTCCTTGGATGTGTCGCAATTGTTTTG
CTTCAGACTCTAAACAACAGGAAAAGATTCAACAGAAATGGAGGTAAACTACTGAATGCC
CAGGGCATAACCACCTACACCAAAAGGGAGCTGAAGAAGATAACTAATGGCTACAGCAAA
CGCCTTGGAGGAGGGCACTTTGGCAATGTTTACGAGGGCACCATCGTCGACGGCAGAAAG
GTCGCCGTCAAATGTCCTTTGCGGACAAGGGTGTCGTCGCACCGCTGCCATTGGAAGAAT
TTGATTCGACCTCGCCGTGTACCGCTACCGCAACAGAGGGTGGAGGAAGATGGGTCGTTC
ATGAACGAGATCAGGTTCCAGTTCGAAGTCAGTCGTCACAAGAACTTGGTCCAGCTCCTG
GGATGCTGCCTAGAGACCGACATTCCGATCCTAGTCTTCGAGTTTGTCGCCAATGGAAGC
CTGGAGGACATACTTCATAGTGCCAAGAAACCATGTACCCTCTCGCTGCCGGAGCGGCTG
GACATCGCCATTGGCTCCGCGGAAGCTATCGCCTACATGCACTCCCTTGACAATCAAAAG
CGTGTCCATGGAGACATCAAGCCTTCCAACATCCTCCTTGACGATGACCTCAATCCAAAA
GTCTCTGACTTTGGTTCCTCCAAGCTCCTGGCAATCCATAGCTACTACGTTAGGGCAGTG
GCTGCAGATATAGGCTACATGGACCCATTATATATGAAGACCGAGCACTTCACATTGGAG
TGCGATGTCTACAGCTTCGGCGTGGTGCTTCTGGAGCTCATCACGAGGAGAAGGGCCAGC
TGGTATGAACAAGATCACCAAGGGAACAAGATCCTCCCCATCGAGTTCGTCAAGTGCTTC
AAGGACCACGGTAGCGGATGTGCGATGTATGATAGCAGACTTGATTTCTCAGCTGGCGAG
GATGCTCAATCTCGATGCAACAAGCGTTGCCTCGACATGATTGGCATGTTGGCCGTCCGA
TGCCTCAAGGAAGACAAGAGGGAGAGGCCAACCATGGCAGAGGTTGTCGAGGAGCTTAAG
CGAGTGAAGGTACTACTGCTGGGTACACATATATAA

Peptide Sequence

PEP ID

Zm00001d007745_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:238606921:238613493:-1 gene:Zm00001d007745 transcript:Zm00001d007745_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description: S-receptor kinase1
Sequence

MSSLLLRVLLIQLAAVECLSAAIPGCLTQCGGVEIPYPFGVGTNCSRKGFRIKCINGSAG
EEIPVLLPTTRYQNIRVLNLSVSPLPEARVLLPVAWQCFNATGGVTGIYSGDVDFNPEGV
YRISNTQNELFVLGCDTYAFTKGVRVHNVNARFPYRYFTGCITVSVDDKDPRDGACAGLG
CCRVDIPPGITDTSMTFSSTWTRANQTFCPCDYAFIVEKGNYTFKASDLVSHTPDNRLPL
DWWTMPLRLDWAIRDNNGDSMTSISCAQAPNEPDYGCRSKHSECTNSTNGPGYFCKCAHG
YDGNPYVQSDGECTNINECQDPKSHNCSSGSKCIDTDGGYYCQCNFFRRGQQCDPLIPMA
AVALLTTFAAVVLGCVAIVLLQTLNNRKRFNRNGGKLLNAQGITTYTKRELKKITNGYSK
RLGGGHFGNVYEGTIVDGRKVAVKCPLRTRVSSHRCHWKNLIRPRRVPLPQQRVEEDGSF
MNEIRFQFEVSRHKNLVQLLGCCLETDIPILVFEFVANGSLEDILHSAKKPCTLSLPERL
DIAIGSAEAIAYMHSLDNQKRVHGDIKPSNILLDDDLNPKVSDFGSSKLLAIHSYYVRAV
AADIGYMDPLYMKTEHFTLECDVYSFGVVLLELITRRRASWYEQDHQGNKILPIEFVKCF
KDHGSGCAMYDSRLDFSAGEDAQSRCNKRCLDMIGMLAVRCLKEDKRERPTMAEVVEELK
RVKVLLLGTHI

Transcript Sequence

Transcript ID

Zm00001d007745_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:238606921:238613493:-1 gene:Zm00001d007745 gene_biotype:protein_coding transcript_biotype:protein_coding description: S-receptor kinase1
Sequence

ACGCATCAAACTAGTAGCAAATTAATAATCCAGCGAACACACTATACTAGTGAGCAAATA
AAGCCACCGATGTCATCACTCCTGTTGCGAGTGCTGCTCATCCAGCTTGCAGCAGTGGAG
TGCCTCTCCGCCGCGATTCCAGGCTGCCTAACGCAATGTGGAGGCGTAGAGATACCCTAT
CCATTCGGCGTCGGCACCAACTGCTCCCGCAAAGGGTTCCGGATCAAGTGCATCAACGGC
AGCGCGGGCGAGGAGATTCCAGTGCTGCTACCTACTACGCGCTACCAGAACATCCGGGTG
CTGAACCTGTCCGTGTCGCCGTTGCCGGAGGCTCGAGTGCTTCTTCCGGTGGCATGGCAG
TGCTTCAACGCCACCGGGGGCGTCACTGGGATCTACTCGGGAGATGTGGACTTCAACCCA
GAGGGCGTATACCGCATCTCCAACACACAGAACGAGCTCTTCGTCCTCGGCTGCGACACC
TATGCGTTCACCAAAGGCGTGAGGGTGCACAACGTTAACGCACGCTTCCCTTACAGATAC
TTCACGGGGTGTATCACCGTCAGTGTAGACGACAAGGACCCGCGCGACGGTGCCTGCGCG
GGCCTCGGCTGCTGCCGCGTCGACATCCCGCCAGGCATCACGGACACCAGCATGACCTTC
TCGTCTACCTGGACGCGTGCCAACCAGACCTTCTGCCCCTGCGACTACGCCTTCATCGTG
GAGAAGGGCAACTACACCTTCAAGGCATCCGACCTTGTGTCGCACACACCCGACAACCGT
CTGCCTTTGGACTGGTGGACCATGCCACTGCGTCTCGACTGGGCCATCCGCGACAACAAC
GGCGACTCCATGACTTCCATCTCCTGCGCCCAGGCACCCAACGAACCTGACTATGGCTGC
CGCAGCAAGCATAGCGAGTGCACTAATTCAACCAATGGCCCTGGCTACTTCTGCAAGTGT
GCCCATGGCTACGACGGAAACCCCTATGTCCAGAGTGATGGTGAATGCACGAATATCAAC
GAGTGCCAAGATCCAAAGTCACATAATTGTTCAAGTGGCAGCAAATGCATTGACACAGAC
GGAGGCTATTATTGTCAATGCAATTTCTTCCGAAGAGGGCAGCAATGTGATCCCTTAATT
CCTATGGCTGCCGTTGCACTGTTAACAACATTTGCTGCCGTCGTCCTTGGATGTGTCGCA
ATTGTTTTGCTTCAGACTCTAAACAACAGGAAAAGATTCAACAGAAATGGAGGTAAACTA
CTGAATGCCCAGGGCATAACCACCTACACCAAAAGGGAGCTGAAGAAGATAACTAATGGC
TACAGCAAACGCCTTGGAGGAGGGCACTTTGGCAATGTTTACGAGGGCACCATCGTCGAC
GGCAGAAAGGTCGCCGTCAAATGTCCTTTGCGGACAAGGGTGTCGTCGCACCGCTGCCAT
TGGAAGAATTTGATTCGACCTCGCCGTGTACCGCTACCGCAACAGAGGGTGGAGGAAGAT
GGGTCGTTCATGAACGAGATCAGGTTCCAGTTCGAAGTCAGTCGTCACAAGAACTTGGTC
CAGCTCCTGGGATGCTGCCTAGAGACCGACATTCCGATCCTAGTCTTCGAGTTTGTCGCC
AATGGAAGCCTGGAGGACATACTTCATAGTGCCAAGAAACCATGTACCCTCTCGCTGCCG
GAGCGGCTGGACATCGCCATTGGCTCCGCGGAAGCTATCGCCTACATGCACTCCCTTGAC
AATCAAAAGCGTGTCCATGGAGACATCAAGCCTTCCAACATCCTCCTTGACGATGACCTC
AATCCAAAAGTCTCTGACTTTGGTTCCTCCAAGCTCCTGGCAATCCATAGCTACTACGTT
AGGGCAGTGGCTGCAGATATAGGCTACATGGACCCATTATATATGAAGACCGAGCACTTC
ACATTGGAGTGCGATGTCTACAGCTTCGGCGTGGTGCTTCTGGAGCTCATCACGAGGAGA
AGGGCCAGCTGGTATGAACAAGATCACCAAGGGAACAAGATCCTCCCCATCGAGTTCGTC
AAGTGCTTCAAGGACCACGGTAGCGGATGTGCGATGTATGATAGCAGACTTGATTTCTCA
GCTGGCGAGGATGCTCAATCTCGATGCAACAAGCGTTGCCTCGACATGATTGGCATGTTG
GCCGTCCGATGCCTCAAGGAAGACAAGAGGGAGAGGCCAACCATGGCAGAGGTTGTCGAG
GAGCTTAAGCGAGTGAAGGTACTACTGCTGGGTACACATATATAAAATAATGGCCTGCAG
CAATCAAGCGAGTTCGAAGCACGCAGATGAATGGAAGCGAAGCAAGCAATAAGAATGGTC
GGTCAGCACATGTGAAGCGCTGAACATGGCGGCGGTACTGATACAAGCAATAATAAGGGT
TCCTCAACTCAAATAAATATACATGATTTATTCTCTTCCAATAAAACAGCAATGTCTATC
TGTAAACATAGTAATTCGCATGAATTGCTTCGCTTTATACTTCTTAATTTGATGTATGTC
CATACAAATAATTGACACTATATATCGAGCACC