Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007682_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:237363792:237365683:-1 gene:Zm00001d007682 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

ATGAATCTTGCTGTACCGCTCTGTGCTGCGAGACTGGAAGAGACTCCACGGAGACACCAC
ATGGCCGCCGCCGGCGACGGCGGTGAGTCCCACTACCGGGAGGCGCTCCGCGAGGCCTTC
GGTGACTCGTCGAGCAGCGATTCCGACACACCCGCCGGTGTCAGCCCCGGAGCAGGCCGC
GGGCACTGGAGGTGGGAGGCGGTGGCTGGGGTCAGGGGGCTGTGGCTCTGCGCCGCCTTC
CTCTCCGCCGACGAGCAGGCGCGCCTCCTCAACGCCATCCAGCGAGAAGGATGGTTTATT
AATGCAGACAACCAAGCGATGAGATTCGGCGACCTCCCTTCGTGGGCAGTCGAACTTTCT
GCACTTATCCGCGAAGCTATCTGCGTCGGCGACGCCAGTGCCGGTCTTGGTGCGGAGGCG
ACGAACGAGGACGAGGATGCGTGCCCTCTGCCATCAGACTTGTTGTGGCGGGAGCCATTT
TTTGATCAGATGATCGCGAACAGATACAGACCAGGGCATCTGTGCTCACGTCGATCTGAT
GCGCTTTGA

Peptide Sequence

PEP ID

Zm00001d007682_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:237363792:237365683:-1 gene:Zm00001d007682 transcript:Zm00001d007682_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

MNLAVPLCAARLEETPRRHHMAAAGDGGESHYREALREAFGDSSSSDSDTPAGVSPGAGR
GHWRWEAVAGVRGLWLCAAFLSADEQARLLNAIQREGWFINADNQAMRFGDLPSWAVELS
ALIREAICVGDASAGLGAEATNEDEDACPLPSDLLWREPFFDQMIANRYRPGHLCSRRSD
AL

Transcript Sequence

Transcript ID

Zm00001d007682_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:237363792:237365683:-1 gene:Zm00001d007682 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

ATACACAGAAGGCGTAACGAGTTGAATGAATCTTGCTGTACCGCTCTGTGCTGCGAGACT
GGAAGAGACTCCACGGAGACACCACATGGCCGCCGCCGGCGACGGCGGTGAGTCCCACTA
CCGGGAGGCGCTCCGCGAGGCCTTCGGTGACTCGTCGAGCAGCGATTCCGACACACCCGC
CGGTGTCAGCCCCGGAGCAGGCCGCGGGCACTGGAGGTGGGAGGCGGTGGCTGGGGTCAG
GGGGCTGTGGCTCTGCGCCGCCTTCCTCTCCGCCGACGAGCAGGCGCGCCTCCTCAACGC
CATCCAGCGAGAAGGATGGTTTATTAATGCAGACAACCAAGCGATGAGATTCGGCGACCT
CCCTTCGTGGGCAGTCGAACTTTCTGCACTTATCCGCGAAGCTATCTGCGTCGGCGACGC
CAGTGCCGGTCTTGGTGCGGAGGCGACGAACGAGGACGAGGATGCGTGCCCTCTGCCATC
AGACTTGTTGTGGCGGGAGCCATTTTTTGATCAGATGATCGCGAACAGATACAGACCAGG
GCATCTGTGCTCACGTCGATCTGATGCGCTTTGACGATGGGATCGCGATCGTCTCGCTCG
AGTCAGCCTGTGTGATGCGCTTCAGTCGAGCAGAAGCAGCCTCTGACACCCCGAAGCAAG
GGGGCAGTGCCAGTGAATCTACTGCAGAGGTCCCCGTTCTGCTGAACCCGGGCTCCCTTG
CGCTCATGTCTGGCGATGCAAGGTATCTGTGGATGCATGAGATCAACCGGAAACCAGGCA
GGCAGCTGTGGGATGGCAGGGAGCTCGAGCAGCGCAGGAGGACCTCTGTTACGTTGAGAA
AACTCCTGCCTTATACGGACTAGATCACTGGTCATGACAGTGAACAAACTGTTCTGCAGT
TACAGGACAGTAACCTTTTTGTGGTGGAAAATTGTAATATGCTGTTGCTAAAGACAGCCA
TCATTGGATAATCAAAAGGCGCAGCCTAAGAGGAGTATTGTTGAGTGCCTCGAGCTCTAT
ATTATTGGCAGGAAGCTGTAG