Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007652_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:236954507:236959237:-1 gene:Zm00001d007652 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 8 description:FHA domain-containing protein FHA2
Sequence

ATGAGCTCGTCTACTTCCGGAACACGAGAGATGTTATCTCCAAATTCTACAGCAACATCT
ATTGGCCAAGTTCAAAAGGTGCCTGGTTTTGCCAAGCTTCAGGGTGAAAACTTTGTGTAC
TTCATGCAAACTTATTCAATCATGTTGGGACGCACTAGCAGAAGTTATACTGCAGACTTT
GATCTCTCTAAATATGAATGTGGGAGCCAATGTGTTTCCCGATGCCATGCATGTATATTC
TACGACTTTGAACTCCGCCATTTTGCCATTGAAGTCCTTGGAAGAAATGGATGCACCATT
CGAGGGGTCTCTTATCTCCCAGGTAGTGTCCCTATTAAATTGAATTCTCAGGACCTCATT
GAGATTGCTGGCATAAAATTCTACTTTCTTCTACCATCTCGCTCCATTTTTGCCACTCTT
GCTGCTCGAGATGCTACTATGTTGCCTCCACAATCTCCATCCTTGTTGCACCCTAATTAC
CCTGGGAATCCAAGTGCTAATGATTGTGGTCGTAGCAATGGTGAGAATGGGGTTAAAATC
AGCAATGACATGCAAGGGAAGTTGGTGAAACAAAAGAGAAGTTTTTCTGGAGAATTGGAT
ATATCTTACAGTTATGGCACCAAAAAAAATGTTGATCGAGTTGGAACACTTGATGGATGT
GATAAGGATACAGACAATCAACAGATCCTACTAGAAGAAGAGAAGGATGTAACCACTTGT
CTTACAACCCTGATATCTGAGTTATCAGGTCCTAAAGAATGGGTGCCTATGGAAAGACTC
CTTTCAGAGATTTCTAAACGTTTTGGTAAAAAATGGCTTCGTGACAGGGTAAGCAAGTAC
TTACCACAAAAGGGCATGTCTGGCTCTTCAACTAAAGTTGATCATAGGCCATGGTGTAGC
TTGTGGGAGCTACTCAGGAAGCACCCAGAGCATTTTGTCATGACCACATTGACAAGAGGA
GAAGAAACATCAGATTATGTTGGCTTGGTACACCTGGTATCTGTGGAAAATGAACCATGA

Peptide Sequence

PEP ID

Zm00001d007652_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:236954507:236959237:-1 gene:Zm00001d007652 transcript:Zm00001d007652_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 8 description:FHA domain-containing protein FHA2
Sequence

MSSSTSGTREMLSPNSTATSIGQVQKVPGFAKLQGENFVYFMQTYSIMLGRTSRSYTADF
DLSKYECGSQCVSRCHACIFYDFELRHFAIEVLGRNGCTIRGVSYLPGSVPIKLNSQDLI
EIAGIKFYFLLPSRSIFATLAARDATMLPPQSPSLLHPNYPGNPSANDCGRSNGENGVKI
SNDMQGKLVKQKRSFSGELDISYSYGTKKNVDRVGTLDGCDKDTDNQQILLEEEKDVTTC
LTTLISELSGPKEWVPMERLLSEISKRFGKKWLRDRVSKYLPQKGMSGSSTKVDHRPWCS
LWELLRKHPEHFVMTTLTRGEETSDYVGLVHLVSVENEP

Transcript Sequence

Transcript ID

Zm00001d007652_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:236954507:236959237:-1 gene:Zm00001d007652 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 8 description:FHA domain-containing protein FHA2
Sequence

AAGAAACAGAATAGGAGTGAAACGGAAATGGCAATAAAACTTTTATTTAATCAGCAAGAT
GAAAGGGGAATAAAGGGGTAGGGGATTGAGCCACGATTCAAGTCAGATCTGGAGAGGGGC
TTCCGTCCTGTTCTCGTCGCACCTCTTTACCTCCGCCGCCGCCGCTATTGTCCCATTCCA
ATCTAGAACCCATAGTCTTCTTCGTGATTGTGCGGTTCTTTGGTGAGAGCATGAGCTCGT
CTACTTCCGGAACACGAGAGATGTTATCTCCAAATTCTACAGCAACATCTATTGGCCAAG
TTCAAAAGGTGCCTGGTTTTGCCAAGCTTCAGGGTGAAAACTTTGTGTACTTCATGCAAA
CTTATTCAATCATGTTGGGACGCACTAGCAGAAGTTATACTGCAGACTTTGATCTCTCTA
AATATGAATGTGGGAGCCAATGTGTTTCCCGATGCCATGCATGTATATTCTACGACTTTG
AACTCCGCCATTTTGCCATTGAAGTCCTTGGAAGAAATGGATGCACCATTCGAGGGGTCT
CTTATCTCCCAGGTAGTGTCCCTATTAAATTGAATTCTCAGGACCTCATTGAGATTGCTG
GCATAAAATTCTACTTTCTTCTACCATCTCGCTCCATTTTTGCCACTCTTGCTGCTCGAG
ATGCTACTATGTTGCCTCCACAATCTCCATCCTTGTTGCACCCTAATTACCCTGGGAATC
CAAGTGCTAATGATTGTGGTCGTAGCAATGGTGAGAATGGGGTTAAAATCAGCAATGACA
TGCAAGGGAAGTTGGTGAAACAAAAGAGAAGTTTTTCTGGAGAATTGGATATATCTTACA
GTTATGGCACCAAAAAAAATGTTGATCGAGTTGGAACACTTGATGGATGTGATAAGGATA
CAGACAATCAACAGATCCTACTAGAAGAAGAGAAGGATGTAACCACTTGTCTTACAACCC
TGATATCTGAGTTATCAGGTCCTAAAGAATGGGTGCCTATGGAAAGACTCCTTTCAGAGA
TTTCTAAACGTTTTGGTAAAAAATGGCTTCGTGACAGGGTAAGCAAGTACTTACCACAAA
AGGGCATGTCTGGCTCTTCAACTAAAGTTGATCATAGGCCATGGTGTAGCTTGTGGGAGC
TACTCAGGAAGCACCCAGAGCATTTTGTCATGACCACATTGACAAGAGGAGAAGAAACAT
CAGATTATGTTGGCTTGGTACACCTGGTATCTGTGGAAAATGAACCATGAATCCTAGACC
CATTATTGCCATTCGAAGGACTTCCGTACCATTATGGGCTAGTTATGTTTGAAATAAACT
AGGACATATTATTGTTATCATATAAAATTTGAAGCCCATTTTGTAGTATGGCTATCATGT
TCTATTGTAAAACTATGCAGCTTTGATGTGGTACCTTTAGTTTTGATCTATGCATTTCAA
TGTCGGAGTTTGGAAACATTTATTTTGAAAGAGTTTGA