Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007650_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:236924518:236928982:1 gene:Zm00001d007650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo/beta-catenin-like repeat family protein

Sequence

ATGGTTTTACTTGAGCTAATCGAAGAACCTGGTCACATCGGAGATGAAGCTCCCTTGGCA
TTAACCACCATGATTAAAGATAGCTTCGAACTGCAGAAACAAGCTCTTGCAACGAACGCA
GTTGAGAAGCTCAGCAACCATCTGCTAGCGAAACCATTGGAGACAAGGCAAGCAGTGGCC
ATATTGCTTGCGTTATCTGAACTTTGCTCAAAACTTGAAGAGTCAAGATCTCAAATGATG
TCAGATGAGGTATCAACCTTACTCCTTGATGCATTGAAACATGATTGGGCTGATATCCGC
GTTGCAGCATGTTCGTGTCTGAAGAATATCTCCAGGTCACCAAAGGTACTTAGTGGAGGT
CGATTATCCTGCGATACAGTTATTGGTCCTCTAGTCCAGCTTTTAAACGACTCGTGTACT
TCGGTCCAGGTTGCTGCCCTTGGTGCCATTTGCAATATTGCCATTAATTTGACACCCAGG
AAATCAGTTCTTCTTAACTCTGGGGTCGTCTCACATCTTGTTCATTTGTCAAAGTCCATG
GATCCAATTTTGAGGCTAAAATCTGTATGGGCTCTCAGGAATATTATGTTTCTTCTTAGT
CCTAAGGATAAAGACTTCATTGTTAAGGAGTTGACCTTATCTACTCTTTCAAGCCTCATA
TGCGATTCTGAACATTTTGTTCAAGAACAAACCCTGGCACTTGTGCGCAATCTTGTTGAT
GGATATGTGGACTCTGCTAATTTTGTCATTGGTGAAGATGGAATAATTATGAATGCTATT
GCAAGACAACTGAACAATGCGTCTGCCCCGGGAGTATTCGTTCAGGGTATGTATGTGCTT
GCAAACATTGCGGCTGGAAACGAATTGAACAAGGAAGCTGTGATGAATGTTCTTCTGCCT
CACAGAGCAGATCGCATCAAACCATTGTTTGCGGTGAACTTTCTGCAAAGCAAGGATAAA
CAATTGCGAGTTGCCACGCTGTGGTGCCTTCTGAACTTGATTTACCCAAAATGTGAAGCC
TCATCTGGTAGGGCTGTCAGACTGCAAAATGCTGGAGTGATCCAACAAGTGAAAAACATG
ATAAACGACCACTGCTTGGATTGCAAGCTTAGAGCACGTATGGTGCTTCAACACTGCGTG
AACAATGCGGATGATTGTTTCATGTGA

Peptide Sequence

PEP ID

Zm00001d007650_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:236924518:236928982:1 gene:Zm00001d007650 transcript:Zm00001d007650_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo/beta-catenin-like repeat family protein

Sequence

MVLLELIEEPGHIGDEAPLALTTMIKDSFELQKQALATNAVEKLSNHLLAKPLETRQAVA
ILLALSELCSKLEESRSQMMSDEVSTLLLDALKHDWADIRVAACSCLKNISRSPKVLSGG
RLSCDTVIGPLVQLLNDSCTSVQVAALGAICNIAINLTPRKSVLLNSGVVSHLVHLSKSM
DPILRLKSVWALRNIMFLLSPKDKDFIVKELTLSTLSSLICDSEHFVQEQTLALVRNLVD
GYVDSANFVIGEDGIIMNAIARQLNNASAPGVFVQGMYVLANIAAGNELNKEAVMNVLLP
HRADRIKPLFAVNFLQSKDKQLRVATLWCLLNLIYPKCEASSGRAVRLQNAGVIQQVKNM
INDHCLDCKLRARMVLQHCVNNADDCFM

Transcript Sequence

Transcript ID

Zm00001d007650_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:236924518:236928982:1 gene:Zm00001d007650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo/beta-catenin-like repeat family protein

Sequence

TGAATTTTGTTCTTTCTCTTTTGGACAGTGAGAATGAGAATGTCACAGAGCTGGCTGCTG
CTATTATATCTCACTCTTGTAAGAGTAGTGCAGAACAATTGGCACTATGCAGTGCTGGAG
TTCCACAAAAACTTGTTAGCCTTTTTGGAGGTTCTGTGAATCTACGGGATGCTTGTTTAG
GTTCTGTCACTGTAGTCGTTCAGAATAACCAAGATGTTGCTTCCAGATTTGTAACAACGG
TTCATGGAAAATGTTTTCGTTCAGTAGTTGGGTTAATACATGATCGGAATCCAAGCACAA
GACTACTTGCTTGCCGATGCTTGATTGCACTTGGGCATGCTTCTCCTGGCCATTTTCAGG
ACAAACAGATTAAGACCAAGTTGATTATGGTTTTACTTGAGCTAATCGAAGAACCTGGTC
ACATCGGAGATGAAGCTCCCTTGGCATTAACCACCATGATTAAAGATAGCTTCGAACTGC
AGAAACAAGCTCTTGCAACGAACGCAGTTGAGAAGCTCAGCAACCATCTGCTAGCGAAAC
CATTGGAGACAAGGCAAGCAGTGGCCATATTGCTTGCGTTATCTGAACTTTGCTCAAAAC
TTGAAGAGTCAAGATCTCAAATGATGTCAGATGAGGTATCAACCTTACTCCTTGATGCAT
TGAAACATGATTGGGCTGATATCCGCGTTGCAGCATGTTCGTGTCTGAAGAATATCTCCA
GGTCACCAAAGGTACTTAGTGGAGGTCGATTATCCTGCGATACAGTTATTGGTCCTCTAG
TCCAGCTTTTAAACGACTCGTGTACTTCGGTCCAGGTTGCTGCCCTTGGTGCCATTTGCA
ATATTGCCATTAATTTGACACCCAGGAAATCAGTTCTTCTTAACTCTGGGGTCGTCTCAC
ATCTTGTTCATTTGTCAAAGTCCATGGATCCAATTTTGAGGCTAAAATCTGTATGGGCTC
TCAGGAATATTATGTTTCTTCTTAGTCCTAAGGATAAAGACTTCATTGTTAAGGAGTTGA
CCTTATCTACTCTTTCAAGCCTCATATGCGATTCTGAACATTTTGTTCAAGAACAAACCC
TGGCACTTGTGCGCAATCTTGTTGATGGATATGTGGACTCTGCTAATTTTGTCATTGGTG
AAGATGGAATAATTATGAATGCTATTGCAAGACAACTGAACAATGCGTCTGCCCCGGGAG
TATTCGTTCAGGGTATGTATGTGCTTGCAAACATTGCGGCTGGAAACGAATTGAACAAGG
AAGCTGTGATGAATGTTCTTCTGCCTCACAGAGCAGATCGCATCAAACCATTGTTTGCGG
TGAACTTTCTGCAAAGCAAGGATAAACAATTGCGAGTTGCCACGCTGTGGTGCCTTCTGA
ACTTGATTTACCCAAAATGTGAAGCCTCATCTGGTAGGGCTGTCAGACTGCAAAATGCTG
GAGTGATCCAACAAGTGAAAAACATGATAAACGACCACTGCTTGGATTGCAAGCTTAGAG
CACGTATGGTGCTTCAACACTGCGTGAACAATGCGGATGATTGTTTCATGTGAGCAACCA
GTATTTCATCTTGGCAACCAAAGTTTATGGAACCATATTCAGATCAGGAAAGAGGAAACC
AGTGTGCTTCAGATCTAATATATTCCCTGAACAGTGGAACATGAGCACCTGCAGGAAGCT
TTGGCTGGTCTCTACAGGTCTTCAAGAGCACATTTTCGCACCATGATAACCTGACAACCG
GTATCTGTTGTGCATGTTGTCCATTACCTTGTTGCGACCGTGCTGTCTGGAGAACTTGAG
CTGCCTGCTCGCCCACTGAAAGGCTCTGGGCGCTAGATCCAGAAATCCCATTTTTCACAG
TGCCTGCCGAACCTGGTGCATATTTTTGCGATGTTGACTACTTGAGTATATAATTGAGGG
ACTGCTGTTGCTGTTGTCGGTGTTGTACAAAAAATTATATTTCTGATCC