Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007600_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:235984776:235987601:1 gene:Zm00001d007600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain-containing protein PLP3B
Sequence

ATGGATCCGGACGCAGTGAAGTCGACGCTCTCTAACCTTGCCTTCGGCAACGTCATCGCC
GCCGCCGCCCGCGACCTCCAGAAGGAAATGGTGGCTAAAGACAAGGCTCAAGCAGCACCT
GCAAGCCATGATGAAGTTGATCTTGATGAGTTGATGGATGACCCTGAACTTGAGAAGTTG
CACGCGGAGAGAATTGCTGCCCTTAAGAAAGAGGTTGAGAAGCGTGAAGTGCTAAAAAGG
CAAGGTCACGGTGAATACAGGGAGGTAATTGAAGGGGACTTCCTTGGGGAGGTTACTGGC
AGTGAAAGAGTCATATGTCATTTCTATCACCGTGAATTTTACCGTTGCAAGATCATGGAT
AAGCATTTGAAGGCCCTTGCTCCTGTCTATGTGGGAACAAAATTCATCAAGCTTGATGCT
GAAAATGCTCCATTCTTTGTAGCCAAACTGGCAATCAAAACCTTGCCATGTGTAATATTG
TTCAAGAAGGGTATTGCTGTTGACCGGTTAGTTGGGTTTCAAGATCTCGGAAGTAAAGAC
GATTTTTCAACAAGAGCGTTGGAAAACATTCTCAAGATGAAAGGGATAATCGATGAGAAG
AAGAAAGATGACGATGATGATGATGAAGAAAGCGAGTCTAAGAATAGGAGGATTAGATCT
TCAACTGCTCAAGATTCTGACTCGGACTGA

Peptide Sequence

PEP ID

Zm00001d007600_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:235984776:235987601:1 gene:Zm00001d007600 transcript:Zm00001d007600_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain-containing protein PLP3B
Sequence

MDPDAVKSTLSNLAFGNVIAAAARDLQKEMVAKDKAQAAPASHDEVDLDELMDDPELEKL
HAERIAALKKEVEKREVLKRQGHGEYREVIEGDFLGEVTGSERVICHFYHREFYRCKIMD
KHLKALAPVYVGTKFIKLDAENAPFFVAKLAIKTLPCVILFKKGIAVDRLVGFQDLGSKD
DFSTRALENILKMKGIIDEKKKDDDDDDEESESKNRRIRSSTAQDSDSD

Transcript Sequence

Transcript ID

Zm00001d007600_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:235984776:235987601:1 gene:Zm00001d007600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain-containing protein PLP3B
Sequence

CACTTCGCTTCGCTTTTCCTTCACGAAAACAGAGCAAATCCGGCGAGCCGGTGCGGCGGC
GGAGGGAGACGCCTGCTCGAGAAGGAGCATTAGCAGGAGGCAGCGGAGATGGATCCGGAC
GCAGTGAAGTCGACGCTCTCTAACCTTGCCTTCGGCAACGTCATCGCCGCCGCCGCCCGC
GACCTCCAGAAGGAAATGGTGGCTAAAGACAAGGCTCAAGCAGCACCTGCAAGCCATGAT
GAAGTTGATCTTGATGAGTTGATGGATGACCCTGAACTTGAGAAGTTGCACGCGGAGAGA
ATTGCTGCCCTTAAGAAAGAGGTTGAGAAGCGTGAAGTGCTAAAAAGGCAAGGTCACGGT
GAATACAGGGAGGTAATTGAAGGGGACTTCCTTGGGGAGGTTACTGGCAGTGAAAGAGTC
ATATGTCATTTCTATCACCGTGAATTTTACCGTTGCAAGATCATGGATAAGCATTTGAAG
GCCCTTGCTCCTGTCTATGTGGGAACAAAATTCATCAAGCTTGATGCTGAAAATGCTCCA
TTCTTTGTAGCCAAACTGGCAATCAAAACCTTGCCATGTGTAATATTGTTCAAGAAGGGT
ATTGCTGTTGACCGGTTAGTTGGGTTTCAAGATCTCGGAAGTAAAGACGATTTTTCAACA
AGAGCGTTGGAAAACATTCTCAAGATGAAAGGGATAATCGATGAGAAGAAGAAAGATGAC
GATGATGATGATGAAGAAAGCGAGTCTAAGAATAGGAGGATTAGATCTTCAACTGCTCAA
GATTCTGACTCGGACTGAACATGAGATGGGGATTGAGGATTCACCCTTTTTGCACTTTAT
ATTTTGTCTGTTCTGTACTGCAATTGATTTGTGCGACTCATGTATCTATACCAGATAACC
AGAACAAAAGCATGTACAAGAGATTCTTAACTTATCTAACTTATGAACACGTTCAAAATT
GAGCTGGCATATCTCAATTGGCC