Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007573_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:235060609:235064668:-1 gene:Zm00001d007573 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDK5RAP1-like protein
Sequence	ATGCCTGGTTCAACAACTTCAACCAAGGGACGCATCTACCACGAGACGTATGGTTGCCAA ATGAATATAAATGACATGGAGATTGTGCTTTCTATCATGAAAAATGAAGGCTATGATGAA ATTGTCCCTGATCCTGAGAGTGCAGAGATAATATTTATCAACACCTGTGCCATCCGGGAC AATGCAGAGCAGAAAGTCTGGCAGCGTCTCAACTACTTTTGGTTTTTGAAAAGGGAATGG AAAGCTAATGTTGCTGAAGGTAGAGCAAAATCTATGCGTCCTCCAAAGATTGCTGTCCTG GGGTGCATGGCAGAACGACTGAAGGAGAAAATACTCGATTCTGATAAGATGGTTGATGTT GTTTGTGGACCTGATGCATATAGGGATTTGCCTAGGTTGCTTCAGGAAGTCGATTACGGC CACAAGGGCATGAACACACTTCTATCACTCGAGGAAACTTATGCTGATATCACCCCAGTA AGGATCTCTGACAATTCAATTACGGCATTTGTGTCAATCATGAGAGGTTGCAATAATATG TGCTCATTCTGCATAGTTCCCTTCACTAGAGGTAGGGAAAGGTCTCGCCCAGTGTCTTCT ATTGTCCGTGAGGTTGGTGAGCTATGGAAAGTTGGTGTGAAGGAGGTAATGCTTCTTGGT CAGAATGTAAACAGCTATAATGACACTTCTGAAGTAGAAGAGTTGGAGCCTGGCAAAAAT TGGCAACTCAGTGAAGGATTTTCCAGCATGTGCAAGGTGAAGAATATGGGGCTGCGTTTT GCTGATCTCCTGGATCGATTATCTTTGGAATACCCTGAGATGCGGTTCAGGTTTACCTCA CCACACCCAAAGGATTTCCCAGATGAGCTACTGTATTTGATGCGGGATAGGTATAACATC TGCAATCTTATTCACTTACCAGCACAAACAGGCAGTACAGCGGCGCTGGAACGAATGCGG AGGGGTTACACTCGAGAAGCATACTTAGAACTTGTCCACAAAATTCGTGATGTCATTCCT GATGTTGGGCTAAGCAGTGATTTCATAACTGGCTTTTGTGGAGAGACAGAAGACGAGCAC GCCGAGACCCTTAGCCTTGTGAGGGCTGTTGGATACGACATGGCCTACATGTTTGCATAC AGCATGAGAGAGAAGACCCACGCTCACCGGAACTACGAGGACGATGTACCCGAAGGTGTG AAACAGAGGCGGCTCATGGAACTGATCAACACTTTCCGCGAGACCACGAAGAAGAACTAC GACTCTCAAGTCGGCACAGTGCAGCTCGTTCTCGTGGAGGGGCCCAACAAGCGTGCTCCC AAAACGGAAGTGATAGGGAAGACTGATCGGGGCCACAAGGTGTCGTTTGCCCGCGTCCCT GTCCCGCACACGTTCGAAGGCGAAGAAGCACGTGAGCCGGCAGTCGGTGACTTCGTCGAG GTGAGAATTCTCAGGTCGTCGACAGCAACGTTGTTCGGGGAGCCGATTGCACGCACAAGC CTGAGCGCGTTCCACAGAAATGTTTCACCCGGAGCGCAGGCTGCTGCTGCGTGA

Peptide Sequence

PEP ID	Zm00001d007573_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:235060609:235064668:-1 gene:Zm00001d007573 transcript:Zm00001d007573_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDK5RAP1-like protein
Sequence	MPGSTTSTKGRIYHETYGCQMNINDMEIVLSIMKNEGYDEIVPDPESAEIIFINTCAIRD NAEQKVWQRLNYFWFLKREWKANVAEGRAKSMRPPKIAVLGCMAERLKEKILDSDKMVDV VCGPDAYRDLPRLLQEVDYGHKGMNTLLSLEETYADITPVRISDNSITAFVSIMRGCNNM CSFCIVPFTRGRERSRPVSSIVREVGELWKVGVKEVMLLGQNVNSYNDTSEVEELEPGKN WQLSEGFSSMCKVKNMGLRFADLLDRLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRYNI CNLIHLPAQTGSTAALERMRRGYTREAYLELVHKIRDVIPDVGLSSDFITGFCGETEDEH AETLSLVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPEGVKQRRLMELINTFRETTKKNY DSQVGTVQLVLVEGPNKRAPKTEVIGKTDRGHKVSFARVPVPHTFEGEEAREPAVGDFVE VRILRSSTATLFGEPIARTSLSAFHRNVSPGAQAAAA

Transcript Sequence

Transcript ID	Zm00001d007573_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:235060609:235064668:-1 gene:Zm00001d007573 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDK5RAP1-like protein
Sequence	GCCTCACACCACCTCGAACGCGATGGCGGCGCCGCTCGCCCCTCTCACTGCGGCCGCGGT GCTCCGCCTCGGGAGCCGAGGCCTGCGCCACCGCATCCTCCTCGCTTCGCTCCGCCCCTG CTCCTCCGCAACCCCGCCCCATCGTTCCGCCCTCCCGGCCGCTGCACGCCGGGCCCCGCC GCCTCCTCGCCGTTTCGCCCACACTCTTGCCGCGTCTGCGGCCACGGCCATCTCCGAGGG TCAGGCGGATGCCTGGTTCAACAACTTCAACCAAGGGACGCATCTACCACGAGACGTATG GTTGCCAAATGAATATAAATGACATGGAGATTGTGCTTTCTATCATGAAAAATGAAGGCT ATGATGAAATTGTCCCTGATCCTGAGAGTGCAGAGATAATATTTATCAACACCTGTGCCA TCCGGGACAATGCAGAGCAGAAAGTCTGGCAGCGTCTCAACTACTTTTGGTTTTTGAAAA GGGAATGGAAAGCTAATGTTGCTGAAGGTAGAGCAAAATCTATGCGTCCTCCAAAGATTG CTGTCCTGGGGTGCATGGCAGAACGACTGAAGGAGAAAATACTCGATTCTGATAAGATGG TTGATGTTGTTTGTGGACCTGATGCATATAGGGATTTGCCTAGGTTGCTTCAGGAAGTCG ATTACGGCCACAAGGGCATGAACACACTTCTATCACTCGAGGAAACTTATGCTGATATCA CCCCAGTAAGGATCTCTGACAATTCAATTACGGCATTTGTGTCAATCATGAGAGGTTGCA ATAATATGTGCTCATTCTGCATAGTTCCCTTCACTAGAGGTAGGGAAAGGTCTCGCCCAG TGTCTTCTATTGTCCGTGAGGTTGGTGAGCTATGGAAAGTTGGTGTGAAGGAGGTAATGC TTCTTGGTCAGAATGTAAACAGCTATAATGACACTTCTGAAGTAGAAGAGTTGGAGCCTG GCAAAAATTGGCAACTCAGTGAAGGATTTTCCAGCATGTGCAAGGTGAAGAATATGGGGC TGCGTTTTGCTGATCTCCTGGATCGATTATCTTTGGAATACCCTGAGATGCGGTTCAGGT TTACCTCACCACACCCAAAGGATTTCCCAGATGAGCTACTGTATTTGATGCGGGATAGGT ATAACATCTGCAATCTTATTCACTTACCAGCACAAACAGGCAGTACAGCGGCGCTGGAAC GAATGCGGAGGGGTTACACTCGAGAAGCATACTTAGAACTTGTCCACAAAATTCGTGATG TCATTCCTGATGTTGGGCTAAGCAGTGATTTCATAACTGGCTTTTGTGGAGAGACAGAAG ACGAGCACGCCGAGACCCTTAGCCTTGTGAGGGCTGTTGGATACGACATGGCCTACATGT TTGCATACAGCATGAGAGAGAAGACCCACGCTCACCGGAACTACGAGGACGATGTACCCG AAGGTGTGAAACAGAGGCGGCTCATGGAACTGATCAACACTTTCCGCGAGACCACGAAGA AGAACTACGACTCTCAAGTCGGCACAGTGCAGCTCGTTCTCGTGGAGGGGCCCAACAAGC GTGCTCCCAAAACGGAAGTGATAGGGAAGACTGATCGGGGCCACAAGGTGTCGTTTGCCC GCGTCCCTGTCCCGCACACGTTCGAAGGCGAAGAAGCACGTGAGCCGGCAGTCGGTGACT TCGTCGAGGTGAGAATTCTCAGGTCGTCGACAGCAACGTTGTTCGGGGAGCCGATTGCAC GCACAAGCCTGAGCGCGTTCCACAGAAATGTTTCACCCGGAGCGCAGGCTGCTGCTGCGT GAGTAGCGGTTGAATTTTTGGTTGTGGATTGAAATATGTAGTGATATTTTAAATGACTAG AGTTTTTGATATAGAGGAGAAACTGAGAACGTGCATGTCAGCCTCATGAGCCTTGGTCAT TTACTTTTTTGATAAGGTTGTATTGCCATGTAAAGGTCAAACAATGTTGACAAAGTTTTT TGCTTG