Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007560_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:234891659:234895374:1 gene:Zm00001d007560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-carotene isomerase D27 chloroplastic
Sequence

ATGGAGGTCGCCGCCGCCACTTGTACGCTCCTTGCTGCCGTCGCCCTACCAGTTTCGTCC
TCAGCAGCAGCAGCACGCTCTGCGACGAAACAGAGCTACTCGAGGAGGAAGACGACGGCC
GTGCGAGCCGTCATGGCGAGGCCGCATCAGGTGCCGCCGCCTGCCACTGCCACCGCCACC
GCCACCACGTACCGCGACAACTGGTTCGACAAGCTGGCCATCGGGTACCTGTCCCGGAAC
CTTCAAGAAGCTTCTGGGATGAAGAACGGAAAGGACGGCTACGAGGGCCTGATAGAGGCG
GCCCTGGCCATCTCCGCGCTGTTCAGGGTTGACCAGCAGTGGGACACTGTGGCCAGCGCT
CTCCAACGGGCCTTCCCCAGCTACATCCTCACCATGATCAAGGTGATGATGCCACCCTCT
CGATTCTCGCGGGAGTATTTCGCCGCCTTCACCACGGTGTTCTTCCCTTGGCTCGTCGGA
CCATGTGAGGTTGTGCGAGTAATCATTGTGTCACCGAACATTTGCAAGGTCAGGGAATCC
CAAGTGGATGGAAGGGAAGAGAGGAACGTGGTCTACATACCCAAATGCAGATTTCTGGAA
AGCACCAACTGTGTCGGAATGTGCACGAACCTCTGCAAAATCCCATGCCAGAGGTTCATC
CAGGATTCACTTGGCACGGCTGTCTACATGTCTCCCAATTTTGAGGACATGAGCTGCGAG
ATGATCTTTGGACAGCAACCACCTGAAGATGATCCAGCACTGAAGCAGCCCTGCTTCCGG
ACAAAATGCATCGCAAAGCAGAATCATCAAGTGAATTGCTCTATTTGA

Peptide Sequence

PEP ID

Zm00001d007560_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:234891659:234895374:1 gene:Zm00001d007560 transcript:Zm00001d007560_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-carotene isomerase D27 chloroplastic
Sequence

MEVAAATCTLLAAVALPVSSSAAAARSATKQSYSRRKTTAVRAVMARPHQVPPPATATAT
ATTYRDNWFDKLAIGYLSRNLQEASGMKNGKDGYEGLIEAALAISALFRVDQQWDTVASA
LQRAFPSYILTMIKVMMPPSRFSREYFAAFTTVFFPWLVGPCEVVRVIIVSPNICKVRES
QVDGREERNVVYIPKCRFLESTNCVGMCTNLCKIPCQRFIQDSLGTAVYMSPNFEDMSCE
MIFGQQPPEDDPALKQPCFRTKCIAKQNHQVNCSI

Transcript Sequence

Transcript ID

Zm00001d007560_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:234891659:234895374:1 gene:Zm00001d007560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-carotene isomerase D27 chloroplastic
Sequence

AGAGTAGAGGCTGAGCTGCATATATCACCGAGCACCCTCTCTCTCTCTGTTCCCCTCCCT
CGCTCGACATGGAGGTCGCCGCCGCCACTTGTACGCTCCTTGCTGCCGTCGCCCTACCAG
TTTCGTCCTCAGCAGCAGCAGCACGCTCTGCGACGAAACAGAGCTACTCGAGGAGGAAGA
CGACGGCCGTGCGAGCCGTCATGGCGAGGCCGCATCAGGTGCCGCCGCCTGCCACTGCCA
CCGCCACCGCCACCACGTACCGCGACAACTGGTTCGACAAGCTGGCCATCGGGTACCTGT
CCCGGAACCTTCAAGAAGCTTCTGGGATGAAGAACGGAAAGGACGGCTACGAGGGCCTGA
TAGAGGCGGCCCTGGCCATCTCCGCGCTGTTCAGGGTTGACCAGCAGTGGGACACTGTGG
CCAGCGCTCTCCAACGGGCCTTCCCCAGCTACATCCTCACCATGATCAAGGTGATGATGC
CACCCTCTCGATTCTCGCGGGAGTATTTCGCCGCCTTCACCACGGTGTTCTTCCCTTGGC
TCGTCGGACCATGTGAGGTTGTGCGAGTAATCATTGTGTCACCGAACATTTGCAAGGTCA
GGGAATCCCAAGTGGATGGAAGGGAAGAGAGGAACGTGGTCTACATACCCAAATGCAGAT
TTCTGGAAAGCACCAACTGTGTCGGAATGTGCACGAACCTCTGCAAAATCCCATGCCAGA
GGTTCATCCAGGATTCACTTGGCACGGCTGTCTACATGTCTCCCAATTTTGAGGACATGA
GCTGCGAGATGATCTTTGGACAGCAACCACCTGAAGATGATCCAGCACTGAAGCAGCCCT
GCTTCCGGACAAAATGCATCGCAAAGCAGAATCATCAAGTGAATTGCTCTATTTGATTTG
AGAGGAAGTGGATATGTAAATTACTATACTACTATCAGTGGAAATTCCC