Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007517_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:233654884:233658383:-1 gene:Zm00001d007517 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like serine endopeptidase family protein
Sequence

ATGGGCTGGAGACCACACGTTGTCTCTGTGTCATCTTCTGCACTACTAGTGCTGCTTCAG
CTCCTCGTGCTACTGATGCTGCCCGCTGATGCGTCGTCATCAAGCCAACTGTTCCTTGAA
AGAACTCAGACGACGACGACGACGATCTACGTCGTGTACATGGGCGAGAAGAAGCACGAC
GACCCTTCCCTCGTCGTGGCGTCGCACCACGCCACGCTGGCCTCCGTTCTTGGGAGCAAG
GATGAAGCACTCAGCTCCATAGTCTACAGCTACAAGCACGGATTCTCCGGTTTCGCGGCG
AAGCTCACCCAGCCCCAAGCGGAGGAGCTTAAAAAATACCCTGGAGTTGTGAGCGTGAAG
CCAAACACGTACCACCACGTCCACACGACTCGGAGCTGGGATTTTCTTGGCATGAGCTAC
GGCCAACAGCAGTCGTCGTCGTGGTCGTCGTCGTCGCGGCTCCTTAGGAAGGCCAAGTAC
GGCGAAGATGTCATCGTCGGCGTCATAGACTCAGGCATCTGGCCGGAATCCCGGAGCTTC
GACGACAGCGGGTACGGCTACGGCCCCGTGCCGAAACGGTGGAAAGGCGTGTGCCAGACA
GGCCAGGCGTTCAACGCGAGCAACTGCAACCGGAAGGTCATCGGCGCGCGGTGGTACGCC
GCCGACGTCAGCGAGGAGGACCTCAAGAACGAATACAGGTCGCCACGGGACGCCAACGGC
CACGGCACGCACACCGCCTCCACGATCGCCGGCTCGCCCGTGCGGAACGCGAGCCACCAC
GGCGGCGGCCTGGCCGCCGGCATAGCGCGCGGCGGGGCGCCGCGCGCGCGGCTGGCAATA
TACAAGGCCTGCCACGCTGTCGGCGGCAGCGCGAGCTGCGGCGACGCCTCGATCCTCGCG
GCCCTCGATGCCGCCATTGGGGACGGCGTCGACCTAGTGTCCCTGTCGCTGGGAGGCTTA
GGCGAGATCTACCAGTCGTTGCACGCCGTGGCGGCCGGGATCACCGTGGTGCTCGCTGCA
GGGAACGATGGCCCCGTGGAGCAGTCCCTCAACAATGCCCTGCCGTGGGGCATCACGGTG
GCCGCCGCCACCATGGACCGCACCTTCCCGACAGTGGTCACGCTGGGCGACGGAGAGAAG
CTGGTGAACAACGGACCCAATCCATCATCCTGCATCGTCAGCTGCGACGAGAAGAATCTG
GGGTCGGAAAACATCACCGGGAAAATCGTCATATGCCGTGCGCCGGTGTTCTGGTCCGAC
TATCCTCCTCCGCGGCAGCTTAGCAGGGCCAGCCGAGCCGCCATCGCCGGCGGGGCCAAG
GGCATCATCTTCGAGCAGTACAGTACCAACAGCCTTGACACCCAGGTCGTCTGCCAAGGC
CACCTGCCATGCGTCGTGGTGGACAGAGAATCCATATTCACGATCCAAAGTAGCGACAGC
AATGTGGCCAAGATTTCGCCGGCGGCGACCATGGTCGGATCCCAGGTCGCCTCGCCGAGA
ATCGCGACGTTCTCGTCGAGGGGCCCCAGTGCTGAGTTTCCCTCCGTACTCAAGAGGAAG
CCGGCCGACGCCTTCGACATGGGCGGCGGCCTCATAGCGCCGGACAGGGCCATGGACCCC
GGCCTGGTGTACGACATCCAGCCGGAGGAGTACACAAGATTGGACGACCGCGCCGACCGC
CTCAACCTCCCGTCCATCGCCGTGTCCGACCTCAAGAACTCCGTCACGGTCTCGCGCACC
GTCACCAACGTCGGGCCGGCGGAGGTGGCGACGTACCGGGCCGTGGTCGAGGCGCCGGCC
GGCGTCACGATGGACGTGGAGCCTCCGGTGATCGCCTTCGAGAGAGGCGGCGCCAGGAAC
GCCACGTTCAGGGTGACGTTCGTGGCGAAGCAGCGGGTGCAGGGCGGCTACGCGTTCGGG
AGCCTGACGTGGCTGGACGACGCCAAGCGGCACTCGGTGAGGATCCCCGTCGCCGTTCGG
ACCGTCGTCCGGGACCTCGTCGCCGATGTAGCTTGA

Peptide Sequence

PEP ID

Zm00001d007517_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:233654884:233658383:-1 gene:Zm00001d007517 transcript:Zm00001d007517_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like serine endopeptidase family protein
Sequence

MGWRPHVVSVSSSALLVLLQLLVLLMLPADASSSSQLFLERTQTTTTTIYVVYMGEKKHD
DPSLVVASHHATLASVLGSKDEALSSIVYSYKHGFSGFAAKLTQPQAEELKKYPGVVSVK
PNTYHHVHTTRSWDFLGMSYGQQQSSSWSSSSRLLRKAKYGEDVIVGVIDSGIWPESRSF
DDSGYGYGPVPKRWKGVCQTGQAFNASNCNRKVIGARWYAADVSEEDLKNEYRSPRDANG
HGTHTASTIAGSPVRNASHHGGGLAAGIARGGAPRARLAIYKACHAVGGSASCGDASILA
ALDAAIGDGVDLVSLSLGGLGEIYQSLHAVAAGITVVLAAGNDGPVEQSLNNALPWGITV
AAATMDRTFPTVVTLGDGEKLVNNGPNPSSCIVSCDEKNLGSENITGKIVICRAPVFWSD
YPPPRQLSRASRAAIAGGAKGIIFEQYSTNSLDTQVVCQGHLPCVVVDRESIFTIQSSDS
NVAKISPAATMVGSQVASPRIATFSSRGPSAEFPSVLKRKPADAFDMGGGLIAPDRAMDP
GLVYDIQPEEYTRLDDRADRLNLPSIAVSDLKNSVTVSRTVTNVGPAEVATYRAVVEAPA
GVTMDVEPPVIAFERGGARNATFRVTFVAKQRVQGGYAFGSLTWLDDAKRHSVRIPVAVR
TVVRDLVADVA

Transcript Sequence

Transcript ID

Zm00001d007517_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:233654884:233658383:-1 gene:Zm00001d007517 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like serine endopeptidase family protein
Sequence

ATAACACTAGCAGAGAGAGAACATAAATCCAAAGATGGGCTGGAGACCACACGTTGTCTC
TGTGTCATCTTCTGCACTACTAGTGCTGCTTCAGCTCCTCGTGCTACTGATGCTGCCCGC
TGATGCGTCGTCATCAAGCCAACTGTTCCTTGAAAGAACTCAGACGACGACGACGACGAT
CTACGTCGTGTACATGGGCGAGAAGAAGCACGACGACCCTTCCCTCGTCGTGGCGTCGCA
CCACGCCACGCTGGCCTCCGTTCTTGGGAGCAAGGATGAAGCACTCAGCTCCATAGTCTA
CAGCTACAAGCACGGATTCTCCGGTTTCGCGGCGAAGCTCACCCAGCCCCAAGCGGAGGA
GCTTAAAAAATACCCTGGAGTTGTGAGCGTGAAGCCAAACACGTACCACCACGTCCACAC
GACTCGGAGCTGGGATTTTCTTGGCATGAGCTACGGCCAACAGCAGTCGTCGTCGTGGTC
GTCGTCGTCGCGGCTCCTTAGGAAGGCCAAGTACGGCGAAGATGTCATCGTCGGCGTCAT
AGACTCAGGCATCTGGCCGGAATCCCGGAGCTTCGACGACAGCGGGTACGGCTACGGCCC
CGTGCCGAAACGGTGGAAAGGCGTGTGCCAGACAGGCCAGGCGTTCAACGCGAGCAACTG
CAACCGGAAGGTCATCGGCGCGCGGTGGTACGCCGCCGACGTCAGCGAGGAGGACCTCAA
GAACGAATACAGGTCGCCACGGGACGCCAACGGCCACGGCACGCACACCGCCTCCACGAT
CGCCGGCTCGCCCGTGCGGAACGCGAGCCACCACGGCGGCGGCCTGGCCGCCGGCATAGC
GCGCGGCGGGGCGCCGCGCGCGCGGCTGGCAATATACAAGGCCTGCCACGCTGTCGGCGG
CAGCGCGAGCTGCGGCGACGCCTCGATCCTCGCGGCCCTCGATGCCGCCATTGGGGACGG
CGTCGACCTAGTGTCCCTGTCGCTGGGAGGCTTAGGCGAGATCTACCAGTCGTTGCACGC
CGTGGCGGCCGGGATCACCGTGGTGCTCGCTGCAGGGAACGATGGCCCCGTGGAGCAGTC
CCTCAACAATGCCCTGCCGTGGGGCATCACGGTGGCCGCCGCCACCATGGACCGCACCTT
CCCGACAGTGGTCACGCTGGGCGACGGAGAGAAGCTGGTGAACAACGGACCCAATCCATC
ATCCTGCATCGTCAGCTGCGACGAGAAGAATCTGGGGTCGGAAAACATCACCGGGAAAAT
CGTCATATGCCGTGCGCCGGTGTTCTGGTCCGACTATCCTCCTCCGCGGCAGCTTAGCAG
GGCCAGCCGAGCCGCCATCGCCGGCGGGGCCAAGGGCATCATCTTCGAGCAGTACAGTAC
CAACAGCCTTGACACCCAGGTCGTCTGCCAAGGCCACCTGCCATGCGTCGTGGTGGACAG
AGAATCCATATTCACGATCCAAAGTAGCGACAGCAATGTGGCCAAGATTTCGCCGGCGGC
GACCATGGTCGGATCCCAGGTCGCCTCGCCGAGAATCGCGACGTTCTCGTCGAGGGGCCC
CAGTGCTGAGTTTCCCTCCGTACTCAAGAGGAAGCCGGCCGACGCCTTCGACATGGGCGG
CGGCCTCATAGCGCCGGACAGGGCCATGGACCCCGGCCTGGTGTACGACATCCAGCCGGA
GGAGTACACAAGATTGGACGACCGCGCCGACCGCCTCAACCTCCCGTCCATCGCCGTGTC
CGACCTCAAGAACTCCGTCACGGTCTCGCGCACCGTCACCAACGTCGGGCCGGCGGAGGT
GGCGACGTACCGGGCCGTGGTCGAGGCGCCGGCCGGCGTCACGATGGACGTGGAGCCTCC
GGTGATCGCCTTCGAGAGAGGCGGCGCCAGGAACGCCACGTTCAGGGTGACGTTCGTGGC
GAAGCAGCGGGTGCAGGGCGGCTACGCGTTCGGGAGCCTGACGTGGCTGGACGACGCCAA
GCGGCACTCGGTGAGGATCCCCGTCGCCGTTCGGACCGTCGTCCGGGACCTCGTCGCCGA
TGTAGCTTGA