Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007500_T048
CDS Infomation	cds chromosome:B73_RefGen_v4:2:233347795:233355197:1 gene:Zm00001d007500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication factor C subunit 1
Sequence	ATGCAATGGACAGAAAAATATCGGCCAAAAGTTCCAAATGACATAGTTGGCAATCAATCA ATGGTCAAACAACTTCATGATTGGTTAAAAAGTTGGGATGCACTATTCCTTCATTCTGGC CAAAAGGGTAAGGGAAAGAAACAAACTGACAGTGCAGCCAAAAAGGCTGTGTTGCTGAGT GGACCTCCTGGTATCGGTAAGACTACAACTGCTAAAGTTGTTAGTCAGATGCTTGGTTTG CAGGCCATTGAGGTAAATGCGAGTGATAGCCGTGGTAAGGCAGACTCCAAGATCGAGAAG GGTGTTGGGGGGAGTACATCAAATTCTATCAAAGAGCTTATCAACAACGCGACTCTGAAT TATAGTGACAATCGGTTAAAACATCCCAAAGCTGTACTAGTTATGGATGAAGTTGATGGT ATGTCTGCTGGAGATAGAGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCCAAG ATCCCTATTATCTGCATTTGTAATGACCGTTATAGTCAGAAATTGAAGAATCTTGTGAAT TACTGCCTTATGCTCAACTTCAGAAAGCCAACAAAACAACAGATGGGTAAAAGATTGATG GAAATTGCCAAAAAGGAAGGTATTCAAGCTCAAGAGAATGCAATGGAAGAGCTTGCTGAA AGAGTGCACGGAGATATTCGCATGGCACTCAACCATTTGCAGTATATGAGCCTCTCCCAG TCTGTGGTCAAATATGATGATATAAAGGAGCGACTTAATAGCAGTTCAAAGGATGAAGAT ATTTCTCCTTTTACTGCTGTTGACAAACTTTTTGGTTTCAATGGCGGGAGGTTAAGGATG GATGAGAGAATGGATTTTGGCATGAGCGATCCTGATTTAGTTCCCTTGATCATCCAGGAA AATTATATCAATTATCGGCCTAACACCATCGGCAAGGATGAAAGTGGAGTTAAAAGAATG AATGCTTTAGCCCGGGCTGCTGAATCTATAGCGGACGGTGATCTTGTTAATGTACAGATA AGAAGATATCGACAGTGGCAGCTGTCACAAGCTGCTTGTTTTGCTTCATCTATAGTACCT GCCGCTTTGATGCATGGGAACAGAGAAATCCTTGAAGCAGGTGAGCGAAACTTTAATAGG TTTGGTGGATGGTTGGGTAAGTACTCGACTACTAACAAAAACAGAAGGCTACTGGAAGAT GTCCACAGTCATATTCTTGCCTCCCAGCAAGCAAACTTGGACAGGGATGCATTGAGGTTG GATTATCTTACTCTTATCTTGAGAGAGCTGACTGACCCACTGAAAAAAATGTCAAAGGAT GAAGCTGTTCAAAAGGTGGTAGAGTTTATGGATACATACTCTTTAAGCCAGGAAGACTTC GATACAATTGTTGAAGTATCCAAATTTAAGGGTCATCCAAGTCCTATGGATGGGATTCAA CCTGCTGTTAAAAGTGCCTTGACAAAGGCATACAAACAAGGAAGTAGTTCCCGTGTTGTT CGAGCAGCAGATCTAATAAACATTCCAGGCATGAAAAAGCCTTTAAAGAAACGAGTGGCG GCGATCTTGGAGCCGGTAGAAGAGAGCCTACCTGAAGAAAATGGACTAGCATCAGCTGAA GATGATGAAGATGGTTCTTCTGATGCTGAAAATAATGATGAGCTTGTGCCTGCTGACTCT ACGCCGAAGCTGGACCTGCAAAGCGACAAGAAGAAAGGAATCCAAGTGCAGCTTGACCTG AAGAGCAATGGGGATGGCCCGCGCGGGAAGAAGGCGCCTGCTGCCAGGTCAAGAGCAACC GGGTCAGGTGGGAAGGCCGCGGCGGGAGGAGGTTCGGCTGGGAAGAGGAAGAGGTAA

Peptide Sequence

PEP ID	Zm00001d007500_P048
PEP Infomation	pep chromosome:B73_RefGen_v4:2:233347795:233355197:1 gene:Zm00001d007500 transcript:Zm00001d007500_T048 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication factor C subunit 1
Sequence	MQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKKQTDSAAKKAVLLS GPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELINNATLN YSDNRLKHPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKNLVN YCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHLQYMSLSQ SVVKYDDIKERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERMDFGMSDPDLVPLIIQE NYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAACFASSIVP AALMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILASQQANLDRDALRL DYLTLILRELTDPLKKMSKDEAVQKVVEFMDTYSLSQEDFDTIVEVSKFKGHPSPMDGIQ PAVKSALTKAYKQGSSSRVVRAADLINIPGMKKPLKKRVAAILEPVEESLPEENGLASAE DDEDGSSDAENNDELVPADSTPKLDLQSDKKKGIQVQLDLKSNGDGPRGKKAPAARSRAT GSGGKAAAGGGSAGKRKR

Transcript Sequence

Transcript ID	Zm00001d007500_T048
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:233347795:233355197:1 gene:Zm00001d007500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication factor C subunit 1
Sequence	AGCCGAAGCAAGTGCTGTAGGCAAAAGTATTGCTTCAAACAGTAATGCTGCAAGTGCCTC CGCTGACAAACAAAAGCCCAAGATTGTTGACCGTGGTTCTATGCAATGGACAGAAAAATA TCGGCCAAAAGTTCCAAATGACATAGTTGGCAATCAATCAATGGTCAAACAACTTCATGA TTGGTTAAAAAGTTGGGATGCACTATTCCTTCATTCTGGCCAAAAGGGTAAGGGAAAGAA ACAAACTGACAGTGCAGCCAAAAAGGCTGTGTTGCTGAGTGGACCTCCTGGTATCGGTAA GACTACAACTGCTAAAGTTGTTAGTCAGATGCTTGGTTTGCAGGCCATTGAGGTAAATGC GAGTGATAGCCGTGGTAAGGCAGACTCCAAGATCGAGAAGGGTGTTGGGGGGAGTACATC AAATTCTATCAAAGAGCTTATCAACAACGCGACTCTGAATTATAGTGACAATCGGTTAAA ACATCCCAAAGCTGTACTAGTTATGGATGAAGTTGATGGTATGTCTGCTGGAGATAGAGG TGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCCAAGATCCCTATTATCTGCATTTG TAATGACCGTTATAGTCAGAAATTGAAGAATCTTGTGAATTACTGCCTTATGCTCAACTT CAGAAAGCCAACAAAACAACAGATGGGTAAAAGATTGATGGAAATTGCCAAAAAGGAAGG TATTCAAGCTCAAGAGAATGCAATGGAAGAGCTTGCTGAAAGAGTGCACGGAGATATTCG CATGGCACTCAACCATTTGCAGTATATGAGCCTCTCCCAGTCTGTGGTCAAATATGATGA TATAAAGGAGCGACTTAATAGCAGTTCAAAGGATGAAGATATTTCTCCTTTTACTGCTGT TGACAAACTTTTTGGTTTCAATGGCGGGAGGTTAAGGATGGATGAGAGAATGGATTTTGG CATGAGCGATCCTGATTTAGTTCCCTTGATCATCCAGGAAAATTATATCAATTATCGGCC TAACACCATCGGCAAGGATGAAAGTGGAGTTAAAAGAATGAATGCTTTAGCCCGGGCTGC TGAATCTATAGCGGACGGTGATCTTGTTAATGTACAGATAAGAAGATATCGACAGTGGCA GCTGTCACAAGCTGCTTGTTTTGCTTCATCTATAGTACCTGCCGCTTTGATGCATGGGAA CAGAGAAATCCTTGAAGCAGGTGAGCGAAACTTTAATAGGTTTGGTGGATGGTTGGGTAA GTACTCGACTACTAACAAAAACAGAAGGCTACTGGAAGATGTCCACAGTCATATTCTTGC CTCCCAGCAAGCAAACTTGGACAGGGATGCATTGAGGTTGGATTATCTTACTCTTATCTT GAGAGAGCTGACTGACCCACTGAAAAAAATGTCAAAGGATGAAGCTGTTCAAAAGGTGGT AGAGTTTATGGATACATACTCTTTAAGCCAGGAAGACTTCGATACAATTGTTGAAGTATC CAAATTTAAGGGTCATCCAAGTCCTATGGATGGGATTCAACCTGCTGTTAAAAGTGCCTT GACAAAGGCATACAAACAAGGAAGTAGTTCCCGTGTTGTTCGAGCAGCAGATCTAATAAA CATTCCAGGCATGAAAAAGCCTTTAAAGAAACGAGTGGCGGCGATCTTGGAGCCGGTAGA AGAGAGCCTACCTGAAGAAAATGGACTAGCATCAGCTGAAGATGATGAAGATGGTTCTTC TGATGCTGAAAATAATGATGAGCTTGTGCCTGCTGACTCTACGCCGAAGCTGGACCTGCA AAGCGACAAGAAGAAAGGAATCCAAGTGCAGCTTGACCTGAAGAGCAATGGGGATGGCCC GCGCGGGAAGAAGGCGCCTGCTGCCAGGTCAAGAGCAACCGGGTCAGGTGGGAAGGCCGC GGCGGGAGGAGGTTCGGCTGGGAAGAGGAAGAGGTAAATGAGACATTTGGCGCCTGCCCA CAGTTGGCCGGTGGTTAGTTTGGACGCACAGATCCCTTGGTAAATAAGGAGCAGGGGTGG TAAGCTTCAGAGTTTTGCTCATCTAATGGCACATGTAGGCACTAGGCTACTGTGCCTGCT CCCATATTTTCTCCCAGGGCACCCATGTCTTGCTACCAGAATTTGTTTGCACTTAGGCTA CTTCCAGGTTGTGGCAATCGAGAGTTTGGTGTTGTCTGTTTCAT