Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007436_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:2:231673520:231677240:1 gene:Zm00001d007436 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 58 description:nuclear factor Y subunit C11
Sequence

ATGCAAGCAGATGAGGATGTTGGAAAGATTGCATTAGCAGTGCCTGTTTTAGTCTCGAGG
GCTCTTGAATTGTTTTTACAAGATTTAATTGACCGGACTTATGAAATTACTCTTCAAAGT
GGAGCAAAGACACTGAATTCCTTCCACCTGAAGCAATGTGTGAAGAGGTACAGTTCTTTT
GATTTCCTAACTGAAGTTGTCAGCAAGGTACCAGATCTTGGTGGTGCTGATTCATGTGGA
GATGAAAGAGTGTTACCTAGAAGAAGAAAGTCAAATGGCAGTGACCCAGAGAATGATGAA
TCAAGATCTAGTAAAATGGCTATAAGAAATGCAAATACCAGCCCCAGAGGACGTGGGAGG
GGTCGAGGCAGAGGGCGAGGTCGGCCACCAACCAAGAGAAAGGAAGTTGGTTACGTACAA
TTTGAAGATGAGAGCAGCATGTTTGCTGAACAAGGTGAAACCTTACCAGGAGAGGGAACA
GTTCCAGAGATCAACAGCGGCAACGAGATTACGCCTCAAAGCACGCAACCTCCGCTAACA
GCCCCTGCGCAAGCTACAAATTCTAAGGTGGAAGAAGCAAGCACCGATCATCAGTCAGAT
TGGCCTATGCCAGATGCCACTGGAAACATCGGTGTTGGGCCATCTGGTTTTGGACATCTG
ACAGTGCAGGTTGATGAAGATGAGGACTACGACAATGAGGACTAG

Peptide Sequence

PEP ID

Zm00001d007436_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:2:231673520:231677240:1 gene:Zm00001d007436 transcript:Zm00001d007436_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 58 description:nuclear factor Y subunit C11
Sequence

MQADEDVGKIALAVPVLVSRALELFLQDLIDRTYEITLQSGAKTLNSFHLKQCVKRYSSF
DFLTEVVSKVPDLGGADSCGDERVLPRRRKSNGSDPENDESRSSKMAIRNANTSPRGRGR
GRGRGRGRPPTKRKEVGYVQFEDESSMFAEQGETLPGEGTVPEINSGNEITPQSTQPPLT
APAQATNSKVEEASTDHQSDWPMPDATGNIGVGPSGFGHLTVQVDEDEDYDNED

Transcript Sequence

Transcript ID

Zm00001d007436_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:231673520:231677240:1 gene:Zm00001d007436 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 58 description:nuclear factor Y subunit C11
Sequence

AAAGCAGAAAAAAACAGAGAGTAGTAGACTACGACAGCGTCCGTCGAACCGGAGGGTCGG
AGGCGGAGGCGAAGATGAGGAAGAAGCTCGGCACCCGGTTCCCCGCGCATTTATTGTATT
CCTTCAGGCTGGTTTTGAATCTTCAAAACCTCTTGTTCTGTTGTCATGGAAACAACGTGG
TTGAAGTTCCAAGCTACACACATCTGTATGGTTTGCACTGCAGGCTCGAATCAAAAAGAT
AATGCAAGCAGATGAGGATGTTGGAAAGATTGCATTAGCAGTGCCTGTTTTAGTCTCGAG
GGCTCTTGAATTGTTTTTACAAGATTTAATTGACCGGACTTATGAAATTACTCTTCAAAG
TGGAGCAAAGACACTGAATTCCTTCCACCTGAAGCAATGTGTGAAGAGGTACAGTTCTTT
TGATTTCCTAACTGAAGTTGTCAGCAAGGTACCAGATCTTGGTGGTGCTGATTCATGTGG
AGATGAAAGAGTGTTACCTAGAAGAAGAAAGTCAAATGGCAGTGACCCAGAGAATGATGA
ATCAAGATCTAGTAAAATGGCTATAAGAAATGCAAATACCAGCCCCAGAGGACGTGGGAG
GGGTCGAGGCAGAGGGCGAGGTCGGCCACCAACCAAGAGAAAGGAAGTTGGTTACGTACA
ATTTGAAGATGAGAGCAGCATGTTTGCTGAACAAGGTGAAACCTTACCAGGAGAGGGAAC
AGTTCCAGAGATCAACAGCGGCAACGAGATTACGCCTCAAAGCACGCAACCTCCGCTAAC
AGCCCCTGCGCAAGCTACAAATTCTAAGGTGGAAGAAGCAAGCACCGATCATCAGTCAGA
TTGGCCTATGCCAGATGCCACTGGAAACATCGGTGTTGGGCCATCTGGTTTTGGACATCT
GACAGTGCAGGTTGATGAAGATGAGGACTACGACAATGAGGACTAGTCAGGGCCATCCTC
TCACTGTATGCGCTAACAGGACTGTTCTGGTGTTGTAAAATGTAAATATAGCTTGAAGTA
GCTGCCGCAGCTTAGCTATGATTGTCTGTTATGAGGTTATGTAGTTGCCCTGTGTAACTT
CTGTAATTGCTTTTTAGTTGCCTTTTCTCTACATGATTGACTGTCAAAGCGTTTTGTCAT
AT