Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007417_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:231171260:231187894:1 gene:Zm00001d007417 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase chloroplastic
Sequence	ATGGCCGCCCCACCGCCTTACACCCCGCCGGCGGCGGTTCCCCAGCCCCTCGTCCTCCTC CACCACCCGCCAGCTTTGGTCCTCCACGTCCGCCTCCGACCCCGCAGCCTCCGCCTCGCG AGAGCGCCCGCCGCCACGGCCACCGCAGCCGCGGCCTCCGTCGCCCCCGACGACATCTCG CAGCTCAACTACCGCCTCCGCGCCATAGTTCGCCGCCGCGAAGGCGCCGCTGCCCAAGGC GCCACCTCGTCCTCCCCCGTCGACCCGGCCCAGGCCGAGGCGTACCTCCGCATGATCCGC GACCAGCAGCGGCTCGGCCTGCGCCAGCTCCGCCGGGAGGAACAGGAAGGAGAGGGCGAC GGAGACGAGGAAGGCCCCGACGGGGAGCGAGCCAGGAAGGGAGTGGCGGCGGGGAGCTCG CTGGGGCATCGGGTGGACCCGCGGGAGCTGGAGCCCGGCGAGTATGTCGTGCACAAGAAG GTCGGCGTCGGGAAATTCGCCTGCATCAGCGCCGAGGACGGCGCCGACTACGTCTTCATT CAGTACGCTGACGGCATGGCCAAGCTTGCTGTTGACCAGGCCGCGCGCATGCTCTACAGA TACAACCTGCCTCACGAGAAGAGGAGGCCACGGAATTTGAGCAAACTGAACGATCCTTCC ACCTGGGAGAAGCGGAGGCTGAAAGGGAAGCTTGCTGTTCAGAAGATGGTTGTCAACCTG ATGGAACTGTATTTGCAAAGGATGAGGCTGGGAAGATCTCCGTACCCAAAGCCTGCATCC ATGGATGACTTTGCTGCTGAATTTCCTTATGAGCCTACTCCGGACCAATGCCAGGCCTTT ATAGATGTTGAGAAAGATCTGACAGAAAGGGAAACACCAATGGATAGATTAATTTGTGGA GATGTGGGCTTTGGCAAAACAGAAGTCGCAATGCGTGCTATATTCATTGTTGTGTCTGCA GGATTTCAAGCTATGGTTCTTGCTCCAACAATAATACTTGCTAAGCAACATTATGATGTA ATGACTGAGCGCTTTGCCAACTATCCAGAGATGAAGGTCGCAATATTTAGTGGTGCTCAG AGCAAAGAGGAGAAAGATGAGCTAATAACAATGATTAAGAATGGAGATTTACACATTATT GTTGGCACTCATGCCCTTCTTACGGAAAGGATGGTCTATAGCAATCTTGGTCTCCTAGTG GTGGATGAAGAACAAAAGTTTGGTGTCCAACAAAAGGAGAAGATTGCCTCATACAAGTCT TCTATTGATGTTCTTACACTTTCTGCAACACCCATTCCACGTACCCTGTATCTGGCTTTG ACGGGTTTCCGTGATGCAAGTTTGATGTCTACACCACCTCCTGAAAGAGTTGCTGTAAAG ACATATGTGTCAGCATTTAGTAAAGAAAGGGCCCTATCAGCTATCAAGTTTGAGCTGCAA CGTGGTGGTCAAGTCTTTTATGTTGTGCCTCGAATAAAAGCAATAGACGATGTGTTGCAG TTTCTCAAGGACTCTCTGCCTGATGTACCAATTGCTGTTGCTCATGGAAAGAAATTGTCA AAGAACATACAACTTGCTATGGAAGATTTTACTAGCGGGAAAGTCAAAATTCTTGTCTGC ACACATATCATTGAAAGTGGAATAGATATTGCACATGCCAATACAATGATTATCCAGTTT GCTGAACTATATGGACTTGCCCAGCTGTATCAGTTACGAGGAAGAGTAGGAAGATCAGGT ACAGAAGGCTTCGCATACCTTTTCTACACTGATAAGTCTTTGCTCTCAAGAGTTGCAACG GATAGACTCGGAGCTATTGAGGAGCATTCAGAGCTTGGCCAAGGTTTCCATGTTGCAGAG AAGGATATGGGTATCAGGGGATTTGGAAGCTTGTTTGGTGAGCAACAGTCTGGAGATGTT GCAAATGTTGGCATCGATTTATTCTTTGATATGCTTTTTGATAGCTTGTCAAAGGTTGAC CAGTTTTGCCTAGTCCCAGTACCATACAAAGATGTTCAGCTGGATATAAACATTTCTCCA CGTCTCTCTTCTGAATACATAAGTTATCTGGAAAATCCTGTTGAGTTGCTCAATGAAGCG GCAAAAGCTGCAGAGAAAGATCTATGGACCTTGATACAGTTTACAGAAGACCTCCGTCGA CGATACGGAAAGGAGCCCCGTGATATGGAGTTACTACTGAAAAAGCTCTATGTAAGGCGG ATGGCTGCAGATCTTGGTATCAGTCGGATATATCCATCTGGCAAGATGATATTCATGAAA ACAAACATGAACAAGAAGGTATTTAGGCTCATGACAGAAGCAATGACTTCTGAGACACAT CGGAATTCCCTATCATTTGCTGAAAAGGAAATTAAGGCTGAACTCCTCGTGAATTTGCCA GATACCCTACTTCTGAACTGGCTTTTCCATTGCTTATCGGACTGCTATACTGTAATACCA GCCCTTGTGAAGTACTAG

Peptide Sequence

PEP ID	Zm00001d007417_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:231171260:231187894:1 gene:Zm00001d007417 transcript:Zm00001d007417_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase chloroplastic
Sequence	MAAPPPYTPPAAVPQPLVLLHHPPALVLHVRLRPRSLRLARAPAATATAAAASVAPDDIS QLNYRLRAIVRRREGAAAQGATSSSPVDPAQAEAYLRMIRDQQRLGLRQLRREEQEGEGD GDEEGPDGERARKGVAAGSSLGHRVDPRELEPGEYVVHKKVGVGKFACISAEDGADYVFI QYADGMAKLAVDQAARMLYRYNLPHEKRRPRNLSKLNDPSTWEKRRLKGKLAVQKMVVNL MELYLQRMRLGRSPYPKPASMDDFAAEFPYEPTPDQCQAFIDVEKDLTERETPMDRLICG DVGFGKTEVAMRAIFIVVSAGFQAMVLAPTIILAKQHYDVMTERFANYPEMKVAIFSGAQ SKEEKDELITMIKNGDLHIIVGTHALLTERMVYSNLGLLVVDEEQKFGVQQKEKIASYKS SIDVLTLSATPIPRTLYLALTGFRDASLMSTPPPERVAVKTYVSAFSKERALSAIKFELQ RGGQVFYVVPRIKAIDDVLQFLKDSLPDVPIAVAHGKKLSKNIQLAMEDFTSGKVKILVC THIIESGIDIAHANTMIIQFAELYGLAQLYQLRGRVGRSGTEGFAYLFYTDKSLLSRVAT DRLGAIEEHSELGQGFHVAEKDMGIRGFGSLFGEQQSGDVANVGIDLFFDMLFDSLSKVD QFCLVPVPYKDVQLDINISPRLSSEYISYLENPVELLNEAAKAAEKDLWTLIQFTEDLRR RYGKEPRDMELLLKKLYVRRMAADLGISRIYPSGKMIFMKTNMNKKVFRLMTEAMTSETH RNSLSFAEKEIKAELLVNLPDTLLLNWLFHCLSDCYTVIPALVKY

Transcript Sequence

Transcript ID	Zm00001d007417_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:231171260:231187894:1 gene:Zm00001d007417 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase chloroplastic
Sequence	CCAGATGCCCCGGGCATCCCCGTAGCCTCGCGGCCTCGGCGTCCCCGTCCCTCCATGGCC GCCCCACCGCCTTACACCCCGCCGGCGGCGGTTCCCCAGCCCCTCGTCCTCCTCCACCAC CCGCCAGCTTTGGTCCTCCACGTCCGCCTCCGACCCCGCAGCCTCCGCCTCGCGAGAGCG CCCGCCGCCACGGCCACCGCAGCCGCGGCCTCCGTCGCCCCCGACGACATCTCGCAGCTC AACTACCGCCTCCGCGCCATAGTTCGCCGCCGCGAAGGCGCCGCTGCCCAAGGCGCCACC TCGTCCTCCCCCGTCGACCCGGCCCAGGCCGAGGCGTACCTCCGCATGATCCGCGACCAG CAGCGGCTCGGCCTGCGCCAGCTCCGCCGGGAGGAACAGGAAGGAGAGGGCGACGGAGAC GAGGAAGGCCCCGACGGGGAGCGAGCCAGGAAGGGAGTGGCGGCGGGGAGCTCGCTGGGG CATCGGGTGGACCCGCGGGAGCTGGAGCCCGGCGAGTATGTCGTGCACAAGAAGGTCGGC GTCGGGAAATTCGCCTGCATCAGCGCCGAGGACGGCGCCGACTACGTCTTCATTCAGTAC GCTGACGGCATGGCCAAGCTTGCTGTTGACCAGGCCGCGCGCATGCTCTACAGATACAAC CTGCCTCACGAGAAGAGGAGGCCACGGAATTTGAGCAAACTGAACGATCCTTCCACCTGG GAGAAGCGGAGGCTGAAAGGGAAGCTTGCTGTTCAGAAGATGGTTGTCAACCTGATGGAA CTGTATTTGCAAAGGATGAGGCTGGGAAGATCTCCGTACCCAAAGCCTGCATCCATGGAT GACTTTGCTGCTGAATTTCCTTATGAGCCTACTCCGGACCAATGCCAGGCCTTTATAGAT GTTGAGAAAGATCTGACAGAAAGGGAAACACCAATGGATAGATTAATTTGTGGAGATGTG GGCTTTGGCAAAACAGAAGTCGCAATGCGTGCTATATTCATTGTTGTGTCTGCAGGATTT CAAGCTATGGTTCTTGCTCCAACAATAATACTTGCTAAGCAACATTATGATGTAATGACT GAGCGCTTTGCCAACTATCCAGAGATGAAGGTCGCAATATTTAGTGGTGCTCAGAGCAAA GAGGAGAAAGATGAGCTAATAACAATGATTAAGAATGGAGATTTACACATTATTGTTGGC ACTCATGCCCTTCTTACGGAAAGGATGGTCTATAGCAATCTTGGTCTCCTAGTGGTGGAT GAAGAACAAAAGTTTGGTGTCCAACAAAAGGAGAAGATTGCCTCATACAAGTCTTCTATT GATGTTCTTACACTTTCTGCAACACCCATTCCACGTACCCTGTATCTGGCTTTGACGGGT TTCCGTGATGCAAGTTTGATGTCTACACCACCTCCTGAAAGAGTTGCTGTAAAGACATAT GTGTCAGCATTTAGTAAAGAAAGGGCCCTATCAGCTATCAAGTTTGAGCTGCAACGTGGT GGTCAAGTCTTTTATGTTGTGCCTCGAATAAAAGCAATAGACGATGTGTTGCAGTTTCTC AAGGACTCTCTGCCTGATGTACCAATTGCTGTTGCTCATGGAAAGAAATTGTCAAAGAAC ATACAACTTGCTATGGAAGATTTTACTAGCGGGAAAGTCAAAATTCTTGTCTGCACACAT ATCATTGAAAGTGGAATAGATATTGCACATGCCAATACAATGATTATCCAGTTTGCTGAA CTATATGGACTTGCCCAGCTGTATCAGTTACGAGGAAGAGTAGGAAGATCAGGTACAGAA GGCTTCGCATACCTTTTCTACACTGATAAGTCTTTGCTCTCAAGAGTTGCAACGGATAGA CTCGGAGCTATTGAGGAGCATTCAGAGCTTGGCCAAGGTTTCCATGTTGCAGAGAAGGAT ATGGGTATCAGGGGATTTGGAAGCTTGTTTGGTGAGCAACAGTCTGGAGATGTTGCAAAT GTTGGCATCGATTTATTCTTTGATATGCTTTTTGATAGCTTGTCAAAGGTTGACCAGTTT TGCCTAGTCCCAGTACCATACAAAGATGTTCAGCTGGATATAAACATTTCTCCACGTCTC TCTTCTGAATACATAAGTTATCTGGAAAATCCTGTTGAGTTGCTCAATGAAGCGGCAAAA GCTGCAGAGAAAGATCTATGGACCTTGATACAGTTTACAGAAGACCTCCGTCGACGATAC GGAAAGGAGCCCCGTGATATGGAGTTACTACTGAAAAAGCTCTATGTAAGGCGGATGGCT GCAGATCTTGGTATCAGTCGGATATATCCATCTGGCAAGATGATATTCATGAAAACAAAC ATGAACAAGAAGGTATTTAGGCTCATGACAGAAGCAATGACTTCTGAGACACATCGGAAT TCCCTATCATTTGCTGAAAAGGAAATTAAGGCTGAACTCCTCGTGAATTTGCCAGATACC CTACTTCTGAACTGGCTTTTCCATTGCTTATCGGACTGCTATACTGTAATACCAGCCCTT GTGAAGTACTAGATTATTGTTACTATTTCATAAGAACTGAAGGCTTCTGCTGCCCACCAT GAAAGGGGACAATATGTCCATGCTTGAAGAGAATGATCTATCAGAGAAATCAGTCTTGGC TCTTTGATTCATCTGTGATGGATGACTCTTCGTTATGTTGGTATTGGCAGTCAGGCTCTG GCAGGCCAAAGCAAGCCCATACACACTACTGCTTTAGGAAAAGGTCCGCCAAAATTGTCA ACATTACAAGCATACTTCAATGCTATACACGAACTGGAGAATGCTCCACAGACACATTGC AGTTTTCTACATTCGCTAACATCAATAGGATGAGTGTCTGATGCATAATTGCTAAATTCA GGTGCAATGCAAGTATGAAACATGAAATCAGGAAGCTCAGAGGACCTAGTTCAGATGTAC CTGACAATAGATTACATTTCAAAATTCTTCTAGGTTTTTTTGACATGAACTATCAAAATA TTGCTCGAGTAGATAGGGAACTAGGGATGGCGTTAACAATAGACCATTTGTTTGACAATA AAACATTAGGAATTTTTGACCAATTGGTCAGAGTTAATATTTGTTGTAAATCTATTCAAA CAGATTGTGACATTGACAATAACTATAATAGTTGAAAAAAATCACGGAACTACAAGTATT TTTATATAGGGAGAATGTATCCAATGCACTGGACCCATCCGTACACGTATCCAAAGGGCA TGTACAATTTAATTAATTAAATGAAGGGTCTCTCGAAATGTATATA