Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007407_T042
CDS Infomation

cds chromosome:B73_RefGen_v4:2:231041474:231046886:-1 gene:Zm00001d007407 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:related to retinoblastoma1 description:Retinoblastoma-related protein 1

Sequence

ATGCTTTTTGGGTGGCATCTCTTCTTAATGCTCCATTTGAGATCACCAGAATTGTTCAAG
GACCTGGTGTCCTGCATCCATGGATTAGTTGCTGTGTTGGCCATACTTTTGATTCACGTG
CCAGCTAAATTTAGGAGCTTCACGATTGAAGGCTCTTCTCACTTAATCAAACAAACTGAG
AAAGGCGTGGATCTTATTGCTTCATTATGTCATAACTATCATACCTCTGAAGAACGTTTG
AAAGAAATGTTGCACAAGTCTCACAATGCAATAGAAGACATTTTCCATATGAAAGCACTA
AGTGCTTCAGAGTGCAAACCAGAAAATTTGGATAAGATAGACACAGATGACCTGATGTAT
TTCAAAGGTCTGATTGATATGGAATGTTTCCAGTCAAATTTGGAAAAAATGGAGAAACTA
TGTAATTCTAATAGCTGTAAAGGGGAGCTTGATTTTAAATCAATTTTGATCAATAATGAT
TATATTCCCTATGATGAGAACTCGACGGGGGATTCCACCAATTTAGGACATTCAAAGTGT
GCCTTTGAAACATTGGCATCTCCCACAAAGACAATAAAGAACATGCTGACTGTTCCTAGT
TCTCCTTTGTCACCAGCCACCGGTGGTTCAGTCAAGATTGTGCAAATGACACCAGTAACT
TCTGCCATGACGACAGCTAAGTGGCTTCGTGAGGTGATATCTTCATTGCCAGATAAGCCT
TCATCTAAGCTTCAGCAGTTTCTGTCATCATGCGATAGGGATTTGACAAATGCTGTCACA
GAAAGGGTCAGCATAGTTTTGGAAGCAATTTTTCCAACCAAATCTTCTGCCAATCGGGGT
GTATCGTTAGGTCTCAATTGTGCAAATGCCTTTGACATTCCGTGGGCAGAAGCCAGAAAA
GTGGAGGCTTCCAAGTTGTACTATAGGGTATTAGAGGCAATCTGCAGAGCGGAGTTACAA
AACAGCAATGTAAATAATCTAACTCCATTGCTGTCAAATGAGCGTTTCCACCGATGTTTG
ATTGCATGTTCAGCGGACTTAGTATTGGCGACACATAAGACAGTCATCATGATGTTTCCT
GCTGTTCTTGAGAGTACCGGTCTAACTGCATTTGATTTGAGCAAAATAATTGAGAACTTT
GTGAGACATGAAGAGACCCTCCCAAGAGAATTGAAAAGGCACCTAAATTCCTTAGAAGAA
CAGCTTTTGGAAAGCATGGCATGGGAGAAAGGTTCATCATTGTATAACTCACTGATTGTT
GCCAGGCCATCTGTTGCTTCAGAAATAAACCGCCTTGGTCTTTTGGCTGAACCAATGCCA
TCTCTTGATGACTTAGTGTCAAGGCAGAATGTTCGTATCGAGGGCTTGCCTGCTACACCA
TCTAAAAAACGTGCTGCTGGTCCAGATGACAACGCTGATCCTCGATCACCAAAGAGATCG
TGCAATGAATCTAGGAACACAGTAGTAGAGCGCAATTTGCAGACACCTCCACCCAAGCAA
AGCCACATGGTGTCAACTAGTTTGAAAGCAAAATGCCATCCACTCCAGTCCACATTTGCA
AGTCCAACTGTCTGTAATCCTGTTGGTGGGAATGAAAAATGTGCTGACGTGACAATTCAT
ATATTCTTTTCCAAGATTCTGAAGTTGGCTGCTATTAGAATAAGAAACTTGTGCGAAAGG
GTTCAATGTGTGGAACAGACAGAGCGTGTCTATAATGTCTTCAAGCAGATTCTTGAGCAA
CAGACAACATTATTTTTTAATAGACACATCGATCAACTTATCCTTTGCTGTCTTTATGGT
GTTGCAAAGGTTTGTCAATTAGAACTCACATTCAGGGAGATACTCAACAATTACAAAAGA
GAAGCACAATGCAAGCCAGAAGTTTTTTCAAGTATCTATATTGGGAGTACGAACCGTAAT
GGGGTATTAGTATCGCGCCATGTTGGTATCATTACTTTTTACAATGAGGTATTTGTTCCA
GCAGCGAAGCCTTTCCTGGTGTCACTAATATCATCTGGTACTCATCCAGAAGACAAGAAG
AATGCTAGTGGCCAAATTCCTGGATCACCCAAGCCATCTCCTTTCCCAAATTTACCAGAT
ATGTCCCCGAAGAAAGTTTCAGCATCTCATAATGTATATGTGTCTCCTTTGCGGCAAACC
AAGTTGGATCTACTGCTGTCACCAAGTTCCAGGAGTTTTTATGCATGCATTGGTGAAGGC
ACCCATGCTTATCAGAGCCCATCTAAGGATTTGGCTGCTATAAATAGCCGCCTAAATTAT
AATGGCAGGAAAGTAAACAGTCGATTAAATTTCGACATGGTGAGTGACTCAGTGGTAGCC
GGCAGTCTGGGCCAGATAAATGGTGGTTCTACCTCGGATCCTGCAGCTGCATTTAGCCCC
CTTTCAAAGAAGAGAGAGACAGATACTTGA

Peptide Sequence

PEP ID

Zm00001d007407_P042
PEP Infomation

pep chromosome:B73_RefGen_v4:2:231041474:231046886:-1 gene:Zm00001d007407 transcript:Zm00001d007407_T042 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:related to retinoblastoma1 description:Retinoblastoma-related protein 1

Sequence

MLFGWHLFLMLHLRSPELFKDLVSCIHGLVAVLAILLIHVPAKFRSFTIEGSSHLIKQTE
KGVDLIASLCHNYHTSEERLKEMLHKSHNAIEDIFHMKALSASECKPENLDKIDTDDLMY
FKGLIDMECFQSNLEKMEKLCNSNSCKGELDFKSILINNDYIPYDENSTGDSTNLGHSKC
AFETLASPTKTIKNMLTVPSSPLSPATGGSVKIVQMTPVTSAMTTAKWLREVISSLPDKP
SSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCANAFDIPWAEARK
VEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVLATHKTVIMMFP
AVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLIV
ARPSVASEINRLGLLAEPMPSLDDLVSRQNVRIEGLPATPSKKRAAGPDDNADPRSPKRS
CNESRNTVVERNLQTPPPKQSHMVSTSLKAKCHPLQSTFASPTVCNPVGGNEKCADVTIH
IFFSKILKLAAIRIRNLCERVQCVEQTERVYNVFKQILEQQTTLFFNRHIDQLILCCLYG
VAKVCQLELTFREILNNYKREAQCKPEVFSSIYIGSTNRNGVLVSRHVGIITFYNEVFVP
AAKPFLVSLISSGTHPEDKKNASGQIPGSPKPSPFPNLPDMSPKKVSASHNVYVSPLRQT
KLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNSRLNFDMVSDSVVA
GSLGQINGGSTSDPAAAFSPLSKKRETDT

Transcript Sequence

Transcript ID

Zm00001d007407_T042
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:231041474:231046886:-1 gene:Zm00001d007407 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:related to retinoblastoma1 description:Retinoblastoma-related protein 1

Sequence

CAGCAGAAGCAATTGGAGAGTTTGGTAAATCTACTGACGCAGGGAAGCAGGTTCTACCGC
AAAGCATATAATGAACTGTTCTCAGGTGTAACTACTGAGCAGGATCCGGATTCATCGACT
AATATTCCTGAGTATATGCTTTTTGGGTGGCATCTCTTCTTAATGCTCCATTTGAGATCA
CCAGAATTGTTCAAGGACCTGGTGTCCTGCATCCATGGATTAGTTGCTGTGTTGGCCATA
CTTTTGATTCACGTGCCAGCTAAATTTAGGAGCTTCACGATTGAAGGCTCTTCTCACTTA
ATCAAACAAACTGAGAAAGGCGTGGATCTTATTGCTTCATTATGTCATAACTATCATACC
TCTGAAGAACGTTTGAAAGAAATGTTGCACAAGTCTCACAATGCAATAGAAGACATTTTC
CATATGAAAGCACTAAGTGCTTCAGAGTGCAAACCAGAAAATTTGGATAAGATAGACACA
GATGACCTGATGTATTTCAAAGGTCTGATTGATATGGAATGTTTCCAGTCAAATTTGGAA
AAAATGGAGAAACTATGTAATTCTAATAGCTGTAAAGGGGAGCTTGATTTTAAATCAATT
TTGATCAATAATGATTATATTCCCTATGATGAGAACTCGACGGGGGATTCCACCAATTTA
GGACATTCAAAGTGTGCCTTTGAAACATTGGCATCTCCCACAAAGACAATAAAGAACATG
CTGACTGTTCCTAGTTCTCCTTTGTCACCAGCCACCGGTGGTTCAGTCAAGATTGTGCAA
ATGACACCAGTAACTTCTGCCATGACGACAGCTAAGTGGCTTCGTGAGGTGATATCTTCA
TTGCCAGATAAGCCTTCATCTAAGCTTCAGCAGTTTCTGTCATCATGCGATAGGGATTTG
ACAAATGCTGTCACAGAAAGGGTCAGCATAGTTTTGGAAGCAATTTTTCCAACCAAATCT
TCTGCCAATCGGGGTGTATCGTTAGGTCTCAATTGTGCAAATGCCTTTGACATTCCGTGG
GCAGAAGCCAGAAAAGTGGAGGCTTCCAAGTTGTACTATAGGGTATTAGAGGCAATCTGC
AGAGCGGAGTTACAAAACAGCAATGTAAATAATCTAACTCCATTGCTGTCAAATGAGCGT
TTCCACCGATGTTTGATTGCATGTTCAGCGGACTTAGTATTGGCGACACATAAGACAGTC
ATCATGATGTTTCCTGCTGTTCTTGAGAGTACCGGTCTAACTGCATTTGATTTGAGCAAA
ATAATTGAGAACTTTGTGAGACATGAAGAGACCCTCCCAAGAGAATTGAAAAGGCACCTA
AATTCCTTAGAAGAACAGCTTTTGGAAAGCATGGCATGGGAGAAAGGTTCATCATTGTAT
AACTCACTGATTGTTGCCAGGCCATCTGTTGCTTCAGAAATAAACCGCCTTGGTCTTTTG
GCTGAACCAATGCCATCTCTTGATGACTTAGTGTCAAGGCAGAATGTTCGTATCGAGGGC
TTGCCTGCTACACCATCTAAAAAACGTGCTGCTGGTCCAGATGACAACGCTGATCCTCGA
TCACCAAAGAGATCGTGCAATGAATCTAGGAACACAGTAGTAGAGCGCAATTTGCAGACA
CCTCCACCCAAGCAAAGCCACATGGTGTCAACTAGTTTGAAAGCAAAATGCCATCCACTC
CAGTCCACATTTGCAAGTCCAACTGTCTGTAATCCTGTTGGTGGGAATGAAAAATGTGCT
GACGTGACAATTCATATATTCTTTTCCAAGATTCTGAAGTTGGCTGCTATTAGAATAAGA
AACTTGTGCGAAAGGGTTCAATGTGTGGAACAGACAGAGCGTGTCTATAATGTCTTCAAG
CAGATTCTTGAGCAACAGACAACATTATTTTTTAATAGACACATCGATCAACTTATCCTT
TGCTGTCTTTATGGTGTTGCAAAGGTTTGTCAATTAGAACTCACATTCAGGGAGATACTC
AACAATTACAAAAGAGAAGCACAATGCAAGCCAGAAGTTTTTTCAAGTATCTATATTGGG
AGTACGAACCGTAATGGGGTATTAGTATCGCGCCATGTTGGTATCATTACTTTTTACAAT
GAGGTATTTGTTCCAGCAGCGAAGCCTTTCCTGGTGTCACTAATATCATCTGGTACTCAT
CCAGAAGACAAGAAGAATGCTAGTGGCCAAATTCCTGGATCACCCAAGCCATCTCCTTTC
CCAAATTTACCAGATATGTCCCCGAAGAAAGTTTCAGCATCTCATAATGTATATGTGTCT
CCTTTGCGGCAAACCAAGTTGGATCTACTGCTGTCACCAAGTTCCAGGAGTTTTTATGCA
TGCATTGGTGAAGGCACCCATGCTTATCAGAGCCCATCTAAGGATTTGGCTGCTATAAAT
AGCCGCCTAAATTATAATGGCAGGAAAGTAAACAGTCGATTAAATTTCGACATGGTGAGT
GACTCAGTGGTAGCCGGCAGTCTGGGCCAGATAAATGGTGGTTCTACCTCGGATCCTGCA
GCTGCATTTAGCCCCCTTTCAAAGAAGAGAGAGACAGATACTTGATCAATTATAAATGGT
GGCCTCTCTCGTATATAGCTCACAGATCCGTGCTCCGTAGCAGTCTATTCTTCTGAATAA
GTGGATTAACTGGAGCGATTTAACTGTACATGTATGTGTTAGTGAGAAGCAGCAGTTTTT
AGGCAGCAAACTGTTTCAAGTTAGCTTTTGAGCTATCACCATTTCTCTGCTGATTGAACA
TATCCGCTGTGTAGAGTGCTAATGAATCTTTAGTTTTCATTGGGCTGACAT