Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007403_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:230953342:230957070:-1 gene:Zm00001d007403 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:white pollen1 description:Chalcone synthase WHP1
Sequence	ATGGCCGGCGCCACCGTGACCGTGGACGAGGTGAGGAAGGGCCAGCGCGCGACCGGCCCC GCCACCGTGCTGGCCATCGGGACGGCGACGCCCGCCAACTGCGTGTACCAGGCCGACTAC CCGGACTACTACTTCCGGATCACCAAGAGCGACCACCTCACCGACCTCAAGGAGAAGTTC AAGAGGATGTGCGACAAGTCGATGATCCGGAAGCGGTACATGCACCTGACGGAGGAGTTC CTGTCGGAGAACCCGAGCATGTGCGCGTACATGGCGCCGTCGCTGGACGCGCGGCAGGAC GTGGTGGTGACGGAGGTGCCGAAGCTGGGGAAGGCGGCGGCGCAGAAGGCGATCAAGGAG TGGGGGCAGCCCAAGTCGCGGATCACGCACCTGGTGTTCTGCACCACGTCGGGGGTGGAC ATGCCGGGCGCCGACTACCAGCTGACCAAGGCGCTGGGGCTGCGCCCGTCCGTGAACCGC CTGATGATGTACCAGCAGGGGTGCTTCGCGGGCGGCACGGTGCTGCGCGTGGCCAAGGAC CTGGCGGAGAACAACCGCGGGGCGAGGGTCCTGGTGGTGTGCTCGGAGATCACGGCCGTG ACGTTCCGCGGGCCGTCCGAGTCGCACCTGGACTCGCTCGTGGGGCAGGCGCTGTTCGGC GACGGCGCGGCGGCCGTCGTGGTGGGCGCCGACCCGGACGGGCGGGTCGAGCGCCCGCTG TTCCAGCTCGTGTCGGCGGCGCAGACCATCCTGCCCGACTCGGAGGGCGCCATCGACGGC CACCTCCGCGAGGTGGGGCTGACGTTCCACCTGCTCAAGGACGTGCCCGGGCTCATCTCC AAGAACATCGAGCGCGCGCTGGAGGACGCGTTCGAGCCGCTCGGCATCTCCGACTGGAAC TCCATCTTCTGGGTGGCGCACCCCGGCGGGCCCGCCATCCTGGACCAGGTGGAGGCCAGG GTCGGGCTGGACAAGGCCAGGATGCGCGCCACCCGCCACGTCCTCTCCGAGTACGGCAAC ATGTCCAGCGCCTGCGTGCTCTTCATCCTGGACGAGATGCGCAAGCGCTCCGCCGAGGAC GGCCAGGCCACCACCGGCGAGGGGCTCGACTGGGGCGTCCTCTTCGGCTTCGGCCCGGGC CTCACCGTCGAGACCGTCGTGCTCCACAGCGTCCCCATCACCACCGGAGCGCCCACCGCC GCCTGA

Peptide Sequence

PEP ID	Zm00001d007403_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:230953342:230957070:-1 gene:Zm00001d007403 transcript:Zm00001d007403_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:white pollen1 description:Chalcone synthase WHP1
Sequence	MAGATVTVDEVRKGQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSDHLTDLKEKF KRMCDKSMIRKRYMHLTEEFLSENPSMCAYMAPSLDARQDVVVTEVPKLGKAAAQKAIKE WGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMMYQQGCFAGGTVLRVAKD LAENNRGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVVVGADPDGRVERPL FQLVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFEPLGISDWN SIFWVAHPGGPAILDQVEARVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAED GQATTGEGLDWGVLFGFGPGLTVETVVLHSVPITTGAPTAA

Transcript Sequence

Transcript ID	Zm00001d007403_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:230953342:230957070:-1 gene:Zm00001d007403 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:white pollen1 description:Chalcone synthase WHP1
Sequence	GCTAACTAGCGTGAAAGAGCTCCTCCGACGACTACTAGCTCTCGCTTGCTCCGACGACCC CTGCCGGCCGCCTCTGGTACAACGTACGAGAGGAAGAGAGACGATCGATGGCCGGCGCCA CCGTGACCGTGGACGAGGTGAGGAAGGGCCAGCGCGCGACCGGCCCCGCCACCGTGCTGG CCATCGGGACGGCGACGCCCGCCAACTGCGTGTACCAGGCCGACTACCCGGACTACTACT TCCGGATCACCAAGAGCGACCACCTCACCGACCTCAAGGAGAAGTTCAAGAGGATGTGCG ACAAGTCGATGATCCGGAAGCGGTACATGCACCTGACGGAGGAGTTCCTGTCGGAGAACC CGAGCATGTGCGCGTACATGGCGCCGTCGCTGGACGCGCGGCAGGACGTGGTGGTGACGG AGGTGCCGAAGCTGGGGAAGGCGGCGGCGCAGAAGGCGATCAAGGAGTGGGGGCAGCCCA AGTCGCGGATCACGCACCTGGTGTTCTGCACCACGTCGGGGGTGGACATGCCGGGCGCCG ACTACCAGCTGACCAAGGCGCTGGGGCTGCGCCCGTCCGTGAACCGCCTGATGATGTACC AGCAGGGGTGCTTCGCGGGCGGCACGGTGCTGCGCGTGGCCAAGGACCTGGCGGAGAACA ACCGCGGGGCGAGGGTCCTGGTGGTGTGCTCGGAGATCACGGCCGTGACGTTCCGCGGGC CGTCCGAGTCGCACCTGGACTCGCTCGTGGGGCAGGCGCTGTTCGGCGACGGCGCGGCGG CCGTCGTGGTGGGCGCCGACCCGGACGGGCGGGTCGAGCGCCCGCTGTTCCAGCTCGTGT CGGCGGCGCAGACCATCCTGCCCGACTCGGAGGGCGCCATCGACGGCCACCTCCGCGAGG TGGGGCTGACGTTCCACCTGCTCAAGGACGTGCCCGGGCTCATCTCCAAGAACATCGAGC GCGCGCTGGAGGACGCGTTCGAGCCGCTCGGCATCTCCGACTGGAACTCCATCTTCTGGG TGGCGCACCCCGGCGGGCCCGCCATCCTGGACCAGGTGGAGGCCAGGGTCGGGCTGGACA AGGCCAGGATGCGCGCCACCCGCCACGTCCTCTCCGAGTACGGCAACATGTCCAGCGCCT GCGTGCTCTTCATCCTGGACGAGATGCGCAAGCGCTCCGCCGAGGACGGCCAGGCCACCA CCGGCGAGGGGCTCGACTGGGGCGTCCTCTTCGGCTTCGGCCCGGGCCTCACCGTCGAGA CCGTCGTGCTCCACAGCGTCCCCATCACCACCGGAGCGCCCACCGCCGCCTGAGTCGTCC ATCTATCCTCGCGATCGCTCCAGACATGAACGACCCGACCTACGAATAATGTATCTGCGT AATTAATTACTATCTGTCTTGTGTCCTAGTAGCTGTTTTAAAACCCTTAATTAATTTTAT TATGGGCGAGCTAGCTCAAGAGTGGAGTCATAAAACCGCATGGATGGTGAGGTATTGTAT AGTACCTGTGTAAGACAAGCTTGGCTGGTTTTTTTATTTTATATTTTAATCTGTTTGCTC