Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007388_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:2:230458597:230469872:1 gene:Zm00001d007388 gene_biotype:protein_coding transcript_biotype:protein_coding description:no exine formation 1
Sequence	ATGGATCCCTCATCCGGATCCACGTCCCGCCACGGGCGTCTCCTCATCTCGCCGTCGCTA TCCACCCCGACCTTCTCCACCCACTCCCCGTCCCCCTCATCGGCCGCGTCCCCCGCGCCG CACCGCAACTCCACATCCTCTCCGAAGCCCCTCGTATCTTTCCCCTCACCCTCTTCCGCC AACAGGCCCCGATCCTCCTACGTCGGCGCTGGACCGCGCGCTGCCACCGCAGCGGCCTCG GCCTCGGGTCCGGCGTTCGCCCACAACGCGCGCCTTGCGGCGGCCCTGGTCCCTGCCGCG GCCTTCCTTCTCGACCTTGGCGGGCTCCCCGTCTTCGCCGTCCTCGCCATCGGCCTAGCG GCGGCATACCTTCTCGACGCGCTCCAGCTGCGCCAGGGCTCCTTCTTCACCGTCTGGGCG GCGCTGCTCGCGGCCGATGTCGCTTTTTTCTTCTCCGCCTCCCTATCGTCCGCGGCCGCT GCCTCGCTGCCGCTGACCGTCCTCGCGCTGCTTCTCTGCGCTGAGACCTCCTTCCTCATT GGCGTCTGGGCGTCGCTGCAGTTCCGATGGATCCAGCTCGAGAACCCGACTATTGTTGCT GCCCTGGAGCGGCTGCTCTTTGCCTGTGTGCCCATTGCCGCCCCCGCCCTCTTCACGTGG GCTCTCGTGTCTGCGGTCGGCATGGCCAATGCATCCTACTATTTTGCCACGTTCTGCATG GTGTTCTACTGGCTGTTCTCTATACCCCGTCGGTCCAGCTTCAATAGCCGGAAGCAGGAT GCTCCAATGCTGGACAGTGATGGCATTCTTGGTCCCTTGGAGAGCTGTGTGCATTCTCTG TATGTGCTGTTCGTGCCGGTGTTGTTCCATGCCGTGTCCCATCGTGCAACACTCTTCACA TCGTTGGCCAGTGTGTGTGAATTGTTGTTGCTGTTCTTCATACCGTTCTTGTTCCAGCTG TATGCATCCACTCGTGGTGCACTGTGGTGGATCACCAGGGATGCACGCACCATGGACCAG ATAAGAATTGTGAATGGGTTCGTCGCACTGGTCGTGGTGGTGCTTTGCCTTGAGGTGAGA GTTGTGTTCCACTCGTTTGGAAGGTACATTCATGCTCCACCACCGCTGAATTACCTGCTT GTAACTGTCACAATGCTTGGTGGCGCTTTGGGTCTTGCAGCACATGCTGCGGGCAAGGTT GGGGATGCTGCTAGTTCTGTGGCTTTTACAGGATTGGCAGTGCTAGTCAGTGGAGCAGGA GCTGTAGTCATTGGATTCCCCATGGTGTTCCTGCCACTGCCGATGATTTCTGGCTATTAT GTTGCAAGGTTCTTTACTAAGAAAAGCTTGTCATCATACTTTACCTTTGTGGCACTTGCA AGCTTGATGGTCCTTTGGTTTGTGGTGCACAATTATTGGGATCTGAATATTTGGATTGCT GGCATGCCATTGAAGTCCTTCACAAAGTATGTTGTTGCAGCTGTCATCATGGCAATGGCT GTTCCTGGTTTGGCACTTCTTCCAACAAAACTTCGGTTTCTTCTGGAACTTGGTCTTATT GGTCATACATTGTTGCTATGCTACATTGAGAACCGATTGTTTAACTATGCCTCCATGTAT TATTATGGATTTGAAGAGGATATCATCTATCCTAATTATATGGTTTTTATTACAACCTTT TTGGGCTTGGCTCTTGTAAGGAGATTATATGTTGATCAGAGACTAGGGCCCAAAGCTGCT TGGATCTTAACTTGTCTATATTCATCAAAGTTAGCAATGCTGTTTATGACATCAAGATCA GTTATATGGTTCTCAGCTGTTTTGCTACTTGCTGTTACCCCACCTTTACTTCTTTACAGA GACAAGTCCAAAGGAGCTTCTAAGATGAAGGTCTGGCAAGCTTATTTTCATGCATCTGTC ATAGCATTTTCTGCCTGGCTCTGCCGGGAAACAATTTTTGAAGCTTTACAGTGGTGGAAT GGAAGACCTCCTTCAGATGGTCTGTTACTGGGTTCATATATTCTTTTGACAGGAGTTGCA TGCATTCCAATAGTCGCTCTCCATTTCCCTCATGCTCAGTCAGCGAAGAGATTCCTGGTC CTTATTGTGGCAACAGGCCTTCTCTTCGTTGTTATGCAGCCTCCTATTAAGCTATCATGG GTATACCGGTCGGATTTTATCACAGCGGCACATTTATCTGATGATGACATTTCAATATAT GGGTTTGTAGCATCTAAGCCCTCATGGCCGTCATGGCTGCTCATTGCAACTGTGGTACTT ACACTAGCAGCAGTTACATCCATCATCCCAGTGAAGTATGTCGTTGAGTTAAGGACTTCA TATGCAGTGGCTGTGGGGATTACACTAGGCATCTACATCTCTGTTCAGTACTTCTTCCAG GCAGTTGTTCTGTATCCTCTTCTTGTTGCAACAATTGTCTCTGCAGCAGTCTTTGTCGTA TTCACACATCTTCCTTCTGAATCAAGCACAAGGGTTTTGCCATGGGTGTTCTCTTTCTTG GTAGCTTTGTTCCCAGTCACCTATCTGCTCGAAGGACACTTAAGAGCCAAAAGTTTTGCA GATGAGGATGAAGCAGAGAAGTTCACCAACATGTTGGCTATAGAAGGGGCTAGAATGTCA CTTTTGGGTCTCTATGCTGCCATCTTCATGATTATTGCATTAGAAATCAAGTTTGAGCTG ACTTTGCTATTGCGTGAAAAGGCTGCAGACAGAGGTATGCATGGTCCATCTAGTCGGAGT GCTGCCTTCCCACCCAAAGCAAGGCTGCTCCAGCAACGAAGAGCTCATGCTGCACCAACA TTCACCATCAAGCGGTTGGCAGCAGAGGCAGCATGGATGCCTGCTATAGGCAATGTTTCT ACTGTGCTGTGTTTTGGCATCTGCCTGGTTCTAAATCTAACACTCACTGGTGGCTCGAAC CGTGCTATTTTCTTCCTGGCGCCAATCCTTCTGCTTCTGAACCAGGATTCAGATATCTTC GCAGGGTTTGGTGATAGGCAGCGCTATTTCCCAGTAACAGTTTCTATTTCTGGCTATTTA TTGTTGACAGCGTTGTATAGGATATGGGAGGAGACTTGGCCTGGCAATGGAGGATGGGCT CTTGATATCGGGGGCCCGGGCTGGCTGTTTGCTGTGAAGAACTTTGCTCTTCTTGTGCTC ACTTTGCCGAATCACATACTCTTCAACCGCTTCATGTGGGATTATGTCAGACAGACAGAT GCCAAGCTACTGCTGACGCTACCTCTCAACTTGCCTTCGATTATAATGACAGACATACTT ACTATTCGGGTGTTAGGATTGCTAGGAGCTATGTACTCTCTTGCCCAGTACATGATATCA AGGCGCATAAGAATTGCTGGGATGAGATACATTTGA

Peptide Sequence

PEP ID	Zm00001d007388_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:2:230458597:230469872:1 gene:Zm00001d007388 transcript:Zm00001d007388_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:no exine formation 1
Sequence	MDPSSGSTSRHGRLLISPSLSTPTFSTHSPSPSSAASPAPHRNSTSSPKPLVSFPSPSSA NRPRSSYVGAGPRAATAAASASGPAFAHNARLAAALVPAAAFLLDLGGLPVFAVLAIGLA AAYLLDALQLRQGSFFTVWAALLAADVAFFFSASLSSAAAASLPLTVLALLLCAETSFLI GVWASLQFRWIQLENPTIVAALERLLFACVPIAAPALFTWALVSAVGMANASYYFATFCM VFYWLFSIPRRSSFNSRKQDAPMLDSDGILGPLESCVHSLYVLFVPVLFHAVSHRATLFT SLASVCELLLLFFIPFLFQLYASTRGALWWITRDARTMDQIRIVNGFVALVVVVLCLEVR VVFHSFGRYIHAPPPLNYLLVTVTMLGGALGLAAHAAGKVGDAASSVAFTGLAVLVSGAG AVVIGFPMVFLPLPMISGYYVARFFTKKSLSSYFTFVALASLMVLWFVVHNYWDLNIWIA GMPLKSFTKYVVAAVIMAMAVPGLALLPTKLRFLLELGLIGHTLLLCYIENRLFNYASMY YYGFEEDIIYPNYMVFITTFLGLALVRRLYVDQRLGPKAAWILTCLYSSKLAMLFMTSRS VIWFSAVLLLAVTPPLLLYRDKSKGASKMKVWQAYFHASVIAFSAWLCRETIFEALQWWN GRPPSDGLLLGSYILLTGVACIPIVALHFPHAQSAKRFLVLIVATGLLFVVMQPPIKLSW VYRSDFITAAHLSDDDISIYGFVASKPSWPSWLLIATVVLTLAAVTSIIPVKYVVELRTS YAVAVGITLGIYISVQYFFQAVVLYPLLVATIVSAAVFVVFTHLPSESSTRVLPWVFSFL VALFPVTYLLEGHLRAKSFADEDEAEKFTNMLAIEGARMSLLGLYAAIFMIIALEIKFEL TLLLREKAADRGMHGPSSRSAAFPPKARLLQQRRAHAAPTFTIKRLAAEAAWMPAIGNVS TVLCFGICLVLNLTLTGGSNRAIFFLAPILLLLNQDSDIFAGFGDRQRYFPVTVSISGYL LLTALYRIWEETWPGNGGWALDIGGPGWLFAVKNFALLVLTLPNHILFNRFMWDYVRQTD AKLLLTLPLNLPSIIMTDILTIRVLGLLGAMYSLAQYMISRRIRIAGMRYI

Transcript Sequence

Transcript ID	Zm00001d007388_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:230458597:230469872:1 gene:Zm00001d007388 gene_biotype:protein_coding transcript_biotype:protein_coding description:no exine formation 1
Sequence	CCCCTCCCGCCGGCCGATGCATCCCAAACCCTAGCCCTCCGGCGCAAAACCCTAGATCCC GCCCCCGCCTGCATGGATCCCTCATCCGGATCCACGTCCCGCCACGGGCGTCTCCTCATC TCGCCGTCGCTATCCACCCCGACCTTCTCCACCCACTCCCCGTCCCCCTCATCGGCCGCG TCCCCCGCGCCGCACCGCAACTCCACATCCTCTCCGAAGCCCCTCGTATCTTTCCCCTCA CCCTCTTCCGCCAACAGGCCCCGATCCTCCTACGTCGGCGCTGGACCGCGCGCTGCCACC GCAGCGGCCTCGGCCTCGGGTCCGGCGTTCGCCCACAACGCGCGCCTTGCGGCGGCCCTG GTCCCTGCCGCGGCCTTCCTTCTCGACCTTGGCGGGCTCCCCGTCTTCGCCGTCCTCGCC ATCGGCCTAGCGGCGGCATACCTTCTCGACGCGCTCCAGCTGCGCCAGGGCTCCTTCTTC ACCGTCTGGGCGGCGCTGCTCGCGGCCGATGTCGCTTTTTTCTTCTCCGCCTCCCTATCG TCCGCGGCCGCTGCCTCGCTGCCGCTGACCGTCCTCGCGCTGCTTCTCTGCGCTGAGACC TCCTTCCTCATTGGCGTCTGGGCGTCGCTGCAGTTCCGATGGATCCAGCTCGAGAACCCG ACTATTGTTGCTGCCCTGGAGCGGCTGCTCTTTGCCTGTGTGCCCATTGCCGCCCCCGCC CTCTTCACGTGGGCTCTCGTGTCTGCGGTCGGCATGGCCAATGCATCCTACTATTTTGCC ACGTTCTGCATGGTGTTCTACTGGCTGTTCTCTATACCCCGTCGGTCCAGCTTCAATAGC CGGAAGCAGGATGCTCCAATGCTGGACAGTGATGGCATTCTTGGTCCCTTGGAGAGCTGT GTGCATTCTCTGTATGTGCTGTTCGTGCCGGTGTTGTTCCATGCCGTGTCCCATCGTGCA ACACTCTTCACATCGTTGGCCAGTGTGTGTGAATTGTTGTTGCTGTTCTTCATACCGTTC TTGTTCCAGCTGTATGCATCCACTCGTGGTGCACTGTGGTGGATCACCAGGGATGCACGC ACCATGGACCAGATAAGAATTGTGAATGGGTTCGTCGCACTGGTCGTGGTGGTGCTTTGC CTTGAGGTGAGAGTTGTGTTCCACTCGTTTGGAAGGTACATTCATGCTCCACCACCGCTG AATTACCTGCTTGTAACTGTCACAATGCTTGGTGGCGCTTTGGGTCTTGCAGCACATGCT GCGGGCAAGGTTGGGGATGCTGCTAGTTCTGTGGCTTTTACAGGATTGGCAGTGCTAGTC AGTGGAGCAGGAGCTGTAGTCATTGGATTCCCCATGGTGTTCCTGCCACTGCCGATGATT TCTGGCTATTATGTTGCAAGGTTCTTTACTAAGAAAAGCTTGTCATCATACTTTACCTTT GTGGCACTTGCAAGCTTGATGGTCCTTTGGTTTGTGGTGCACAATTATTGGGATCTGAAT ATTTGGATTGCTGGCATGCCATTGAAGTCCTTCACAAAGTATGTTGTTGCAGCTGTCATC ATGGCAATGGCTGTTCCTGGTTTGGCACTTCTTCCAACAAAACTTCGGTTTCTTCTGGAA CTTGGTCTTATTGGTCATACATTGTTGCTATGCTACATTGAGAACCGATTGTTTAACTAT GCCTCCATGTATTATTATGGATTTGAAGAGGATATCATCTATCCTAATTATATGGTTTTT ATTACAACCTTTTTGGGCTTGGCTCTTGTAAGGAGATTATATGTTGATCAGAGACTAGGG CCCAAAGCTGCTTGGATCTTAACTTGTCTATATTCATCAAAGTTAGCAATGCTGTTTATG ACATCAAGATCAGTTATATGGTTCTCAGCTGTTTTGCTACTTGCTGTTACCCCACCTTTA CTTCTTTACAGAGACAAGTCCAAAGGAGCTTCTAAGATGAAGGTCTGGCAAGCTTATTTT CATGCATCTGTCATAGCATTTTCTGCCTGGCTCTGCCGGGAAACAATTTTTGAAGCTTTA CAGTGGTGGAATGGAAGACCTCCTTCAGATGGTCTGTTACTGGGTTCATATATTCTTTTG ACAGGAGTTGCATGCATTCCAATAGTCGCTCTCCATTTCCCTCATGCTCAGTCAGCGAAG AGATTCCTGGTCCTTATTGTGGCAACAGGCCTTCTCTTCGTTGTTATGCAGCCTCCTATT AAGCTATCATGGGTATACCGGTCGGATTTTATCACAGCGGCACATTTATCTGATGATGAC ATTTCAATATATGGGTTTGTAGCATCTAAGCCCTCATGGCCGTCATGGCTGCTCATTGCA ACTGTGGTACTTACACTAGCAGCAGTTACATCCATCATCCCAGTGAAGTATGTCGTTGAG TTAAGGACTTCATATGCAGTGGCTGTGGGGATTACACTAGGCATCTACATCTCTGTTCAG TACTTCTTCCAGGCAGTTGTTCTGTATCCTCTTCTTGTTGCAACAATTGTCTCTGCAGCA GTCTTTGTCGTATTCACACATCTTCCTTCTGAATCAAGCACAAGGGTTTTGCCATGGGTG TTCTCTTTCTTGGTAGCTTTGTTCCCAGTCACCTATCTGCTCGAAGGACACTTAAGAGCC AAAAGTTTTGCAGATGAGGATGAAGCAGAGAAGTTCACCAACATGTTGGCTATAGAAGGG GCTAGAATGTCACTTTTGGGTCTCTATGCTGCCATCTTCATGATTATTGCATTAGAAATC AAGTTTGAGCTGACTTTGCTATTGCGTGAAAAGGCTGCAGACAGAGGTATGCATGGTCCA TCTAGTCGGAGTGCTGCCTTCCCACCCAAAGCAAGGCTGCTCCAGCAACGAAGAGCTCAT GCTGCACCAACATTCACCATCAAGCGGTTGGCAGCAGAGGCAGCATGGATGCCTGCTATA GGCAATGTTTCTACTGTGCTGTGTTTTGGCATCTGCCTGGTTCTAAATCTAACACTCACT GGTGGCTCGAACCGTGCTATTTTCTTCCTGGCGCCAATCCTTCTGCTTCTGAACCAGGAT TCAGATATCTTCGCAGGGTTTGGTGATAGGCAGCGCTATTTCCCAGTAACAGTTTCTATT TCTGGCTATTTATTGTTGACAGCGTTGTATAGGATATGGGAGGAGACTTGGCCTGGCAAT GGAGGATGGGCTCTTGATATCGGGGGCCCGGGCTGGCTGTTTGCTGTGAAGAACTTTGCT CTTCTTGTGCTCACTTTGCCGAATCACATACTCTTCAACCGCTTCATGTGGGATTATGTC AGACAGACAGATGCCAAGCTACTGCTGACGCTACCTCTCAACTTGCCTTCGATTATAATG ACAGACATACTTACTATTCGGGTGTTAGGATTGCTAGGAGCTATGTACTCTCTTGCCCAG TACATGATATCAAGGCGCATAAGAATTGCTGGGATGAGATACATTTGAAATAGGTCATGT AACTTTCTGAGTGCATTGCTTGCAGGCTGTCACTATACATCAAGTTCTTTCAAAACTCAG GAACAGATACTTCATTGCCTGATCCTCTCGCAGCAAAATTGTGCTATGTAGCAGAGAGAA ACAAGTGTCGAACGACTTTGCTTTTTTTGTACTGAATGATTGCATACTGAGTGTAGGCTA AAGGTGTTGTCGCATATATAGATGTATTTTAACAGCACAGATGATGCCATCACCTTGGGT CGTTTATGTTGAACTTTTGACGGC