Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007387_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:2:230449403:230454131:1 gene:Zm00001d007387 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GNAT-transcription factor 14 description:Retrotransposon protein

Sequence

ATGTCGTCGGCCGCCGCCTCCTCCTCTCCCGCCGCCGGTAGCGAAGGAAGCGGTGGTGCG
GTGGAAGGGCGGGAGATCGCGTACGTGAGCTACGGAGGGGAGCATCACCTGCCGCTGGTA
ATGTCGCTGGTCGACGAGGAGCTCAGCGAGCCCTACTCCATCTTCACATACCGCTACTTC
GTGTACCTCTGGCCGCAGCTCACCTTCCTGGCGTTCGATGCCAGGGATGGCAAGTGCGTG
GGGACGGTCGTGTGCAAGATGGGGGAGCACCGGGGTGCATTCAGGGGCTACATCGCCATG
CTCGTCGTCCTGAAGCCCTACCGAGGAAGGGGAATAGCAACTGAGCTAGTTACTAGATCA
ATTCGGGTGATGATGGAGTCTGGCTGTGAGGAGGTGACACTTGAAGCAGAAGTTACTAAC
AAGGGTGCCCTTGCTCTCTATGGTCGCCTGGGGTTTATCCGAGCAAAAAGACTGTACAGG
TACTATTTGAATGGTGTAGACGCTTTTCGGCTGAAACTTCTGTTTCCACGCCCTGATCCT
GGCCTGCCTCCAATGATGGTTGGCAATGACAGGGATGACCAGAAGATGGATTCTCCCTAC
TTGTGA

Peptide Sequence

PEP ID

Zm00001d007387_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:2:230449403:230454131:1 gene:Zm00001d007387 transcript:Zm00001d007387_T010 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GNAT-transcription factor 14 description:Retrotransposon protein

Sequence

MSSAAASSSPAAGSEGSGGAVEGREIAYVSYGGEHHLPLVMSLVDEELSEPYSIFTYRYF
VYLWPQLTFLAFDARDGKCVGTVVCKMGEHRGAFRGYIAMLVVLKPYRGRGIATELVTRS
IRVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLYRYYLNGVDAFRLKLLFPRPDP
GLPPMMVGNDRDDQKMDSPYL

Transcript Sequence

Transcript ID

Zm00001d007387_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:230449403:230454131:1 gene:Zm00001d007387 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GNAT-transcription factor 14 description:Retrotransposon protein

Sequence

ACTGCGGCGATGTCGTCGGCCGCCGCCTCCTCCTCTCCCGCCGCCGGTAGCGAAGGAAGC
GGTGGTGCGGTGGAAGGGCGGGAGATCGCGTACGTGAGCTACGGAGGGGAGCATCACCTG
CCGCTGGTAATGTCGCTGGTCGACGAGGAGCTCAGCGAGCCCTACTCCATCTTCACATAC
CGCTACTTCGTGTACCTCTGGCCGCAGCTCACCTTCCTGGCGTTCGATGCCAGGGATGGC
AAGTGCGTGGGGACGGTCGTGTGCAAGATGGGGGAGCACCGGGGTGCATTCAGGGGCTAC
ATCGCCATGCTCGTCGTCCTGAAGCCCTACCGAGGAAGGGGAATAGCAACTGAGCTAGTT
ACTAGATCAATTCGGGTGATGATGGAGTCTGGCTGTGAGGAGGTGACACTTGAAGCAGAA
GTTACTAACAAGGGTGCCCTTGCTCTCTATGGTCGCCTGGGGTTTATCCGAGCAAAAAGA
CTGTACAGGTACTATTTGAATGGTGTAGACGCTTTTCGGCTGAAACTTCTGTTTCCACGC
CCTGATCCTGGCCTGCCTCCAATGATGGTTGGCAATGACAGGGATGACCAGAAGATGGAT
TCTCCCTACTTGTGACAGTACCCTAATCAGTATGTAGAATTGAGTTGGAGACCCTGATCA
TTCTTTTTTGCTCTGTTTCATGCTTTTATAGCTAGCATGTAACTGCATATTGTTGTACTA
ACATATAAATTTTCGAGGTGTTTTATTTCCTCCTGTTCTTTGATAAGGATGTATTAATCA
ACTTTTCTTTTGCTCAATAAACAAAACGCATGCCGCAGTTGCTGTAGACTGTAGAGT