Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007383_T019
CDS Infomation

cds chromosome:B73_RefGen_v4:2:230347967:230366494:1 gene:Zm00001d007383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alpha-mannosidase

Sequence

ATGTTTACAATGGGAACAGACTTCAAATACCAATACGCAGAGAGTTGGTTCAGAAATATG
GACAAGCTAATTCACTATGTGAACAAGGATGGCCGTATCAACGCTCTTTATTCCACACCT
TCGATTTATACCGATGCAAAATATGCTGCAAATGAGCAGTGGCCTCTCAAGACCAATGAT
TTCTTCCCATATGCAGACAACCCAAATGCCTATTGGACGGGTTACTTTACAAGCAGACCT
GCCTTAAAACGATATGTCCGCATGATGAGTGGGTATTACCTGGCAGCTAGACAGCTGGAG
TTCTTTAAAGGGAGATATAGCTCAGGTCTCTCAACGGATAGTCTAGGTGATGCTCTAGCT
CTTGCACAGCACCATGATGCTGTTACAGGAACAGAGAAACAACATGTTGCAAATGATTAT
GCAAAGAGATTGTCAATTGGATATACACAAGCCCAGGAGCTCGTTTCAACTTCTCTTGCT
TGCTTGACAGAGTCTGGCTCAAAATCACGTTGTGCATCCCCAGTGACAAAATTTTCACAA
TGTCTTCTGCTAAATGTTACATATTGCCCTCCTTCTGAGATGGACTTAACGAAAGGAAAA
AGCTTGGTTGTTCTTGTATACAACTCGCTTGGGTGGAAACGAGAAGACGTCATTCGTATA
CCAGTTTTCAGTGATTCGATTGTCGTTCATGATTCTGAAGGACGAGAAATTGAATCACAA
CTTCTGCCTATAGCTACAGCCTCGTTGAACATAAGAGAAAAACATGTCAAGGCTTACCTG
GGCACAACGCCAGGTGCAAAGCCCAAGTTTTGGCTTGCTTTTCCTGTGTCTGTTCCACCT
CTTGGTTTCAATACTTATTTTGTCTCAAACTTGAAGAAATCAGCACATATTTCTTCGAAG
TCCACTCAGTACTCACCTCAAGGAAGTGAAAGTAGTAATCTACAAGTTGGTCAAGGCAAC
TTGAAACTTCAATATAATGAAGCTGGAAAATTATCCCTGTACTCCGATAGTAAGACTATG
GTTCAAGCAAACTTTGAGCAGAAATACAAGTATTATATTGGACAGGATGGAAATGGAAGT
GATCCTCAGGCTTCTGGAGCATACATATTCCGCCCTAATGGCACAGTTCCAATCAGTACT
GATGGGCAGGTTTCTCTCACAGTTCTGCGTGGGCCCATATTGGATGAAGTGCACCAGCAG
ATAAATTCATGGATTTTTCAGATTACCAGGCTTTACAAGGAGAAGGACTTTTTGGAAACT
GAATTTATAGTTGGGCCCATACCAGTAGATGATGGAAATGGAAAAGAAGTAGCAACTGAA
ATTGTTACAAACATGGTTACAAACAAAACATTCTACACTGATTCCAGTGGACGTGATTTC
ATCAAAAGGATAAGAGATTATCGATCGGAGTGGAAGATTGAAGTGCACCAGCCTATTGCT
GGAAACTATTATCCTGTTAATCTTGGCATCTATGTGGAGGATGGCAGCAAAGAGCTGTCT
GTACTGGTAGACAGGTCAATTGGAGGTTCCAGTATAAAGGATGGACAAATAGAGCTAATG
CTACACAGGAGGCTACTCCATGATGATGGGAAAGGCGTCGCCGAGGCGCTAAATGAAACA
GTCTGTCTCGATAAGCAATGTGAAGGACTCATTATACAAGGAAAATACTATGTCAAAATA
GACCCACAAGGAGAAGGAGCTCGGTGGCGTCGGACATTTGGCCAGGAAATATACTCCCCT
CTCCTTCTTGCTTTCACAGAGCAGGATGGAGGCAACTGGGCGAATTCACATGTTGCAAAA
TTCTCTGCGATGGATTCAACTTACAGCTTGCCTGATAATGTTGCAATGCTTACCCTTCAG
GAGCTTGAAGATGGAAGTGTTCTCCTTCGGTTTGCTCATCTATATGAGGCCGGGGAGGAC
AAGGATCTTTCGTCTTTAGCGAGTATCGACCTCAAGAGAGTGTTCCCGGAGAAGAAGATT
GGCAAGGTCATCGAGACAAGCTTATCGGCAAACCAAGAACGCGCAGCCATGGAGAAGAAG
CGTTTGAAATGGAAGGCGCAAGGTTCTGCGGCTGACGAGAAGGTGGTTCGGGGTGGCCCT
GTGGATCCTTCGAAGCTCGTCGTTGAGCTGGGGCCAATGGAGATCCGCACATTCATCGTC
AGCTTTGATCACATCAGTGACAAGCAACAGCTATAA

Peptide Sequence

PEP ID

Zm00001d007383_P019
PEP Infomation

pep chromosome:B73_RefGen_v4:2:230347967:230366494:1 gene:Zm00001d007383 transcript:Zm00001d007383_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alpha-mannosidase

Sequence

MFTMGTDFKYQYAESWFRNMDKLIHYVNKDGRINALYSTPSIYTDAKYAANEQWPLKTND
FFPYADNPNAYWTGYFTSRPALKRYVRMMSGYYLAARQLEFFKGRYSSGLSTDSLGDALA
LAQHHDAVTGTEKQHVANDYAKRLSIGYTQAQELVSTSLACLTESGSKSRCASPVTKFSQ
CLLLNVTYCPPSEMDLTKGKSLVVLVYNSLGWKREDVIRIPVFSDSIVVHDSEGREIESQ
LLPIATASLNIREKHVKAYLGTTPGAKPKFWLAFPVSVPPLGFNTYFVSNLKKSAHISSK
STQYSPQGSESSNLQVGQGNLKLQYNEAGKLSLYSDSKTMVQANFEQKYKYYIGQDGNGS
DPQASGAYIFRPNGTVPISTDGQVSLTVLRGPILDEVHQQINSWIFQITRLYKEKDFLET
EFIVGPIPVDDGNGKEVATEIVTNMVTNKTFYTDSSGRDFIKRIRDYRSEWKIEVHQPIA
GNYYPVNLGIYVEDGSKELSVLVDRSIGGSSIKDGQIELMLHRRLLHDDGKGVAEALNET
VCLDKQCEGLIIQGKYYVKIDPQGEGARWRRTFGQEIYSPLLLAFTEQDGGNWANSHVAK
FSAMDSTYSLPDNVAMLTLQELEDGSVLLRFAHLYEAGEDKDLSSLASIDLKRVFPEKKI
GKVIETSLSANQERAAMEKKRLKWKAQGSAADEKVVRGGPVDPSKLVVELGPMEIRTFIV
SFDHISDKQQL

Transcript Sequence

Transcript ID

Zm00001d007383_T019
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:230347967:230366494:1 gene:Zm00001d007383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alpha-mannosidase

Sequence

GGATGATCCCCTTCTTTTCGATTATAATGTTGAAGAACGAGTTAATGATTTTGTTGCTGC
AGCTGTAGCACAGGCAAATATCACGAGGACAAATCATATCATGTTTACAATGGGAACAGA
CTTCAAATACCAATACGCAGAGAGTTGGTTCAGAAATATGGACAAGCTAATTCACTATGT
GAACAAGGATGGCCGTATCAACGCTCTTTATTCCACACCTTCGATTTATACCGATGCAAA
ATATGCTGCAAATGAGCAGTGGCCTCTCAAGACCAATGATTTCTTCCCATATGCAGACAA
CCCAAATGCCTATTGGACGGGTTACTTTACAAGCAGACCTGCCTTAAAACGATATGTCCG
CATGATGAGTGGGTATTACCTGGCAGCTAGACAGCTGGAGTTCTTTAAAGGGAGATATAG
CTCAGGTCTCTCAACGGATAGTCTAGGTGATGCTCTAGCTCTTGCACAGCACCATGATGC
TGTTACAGGAACAGAGAAACAACATGTTGCAAATGATTATGCAAAGAGATTGTCAATTGG
ATATACACAAGCCCAGGAGCTCGTTTCAACTTCTCTTGCTTGCTTGACAGAGTCTGGCTC
AAAATCACGTTGTGCATCCCCAGTGACAAAATTTTCACAATGTCTTCTGCTAAATGTTAC
ATATTGCCCTCCTTCTGAGATGGACTTAACGAAAGGAAAAAGCTTGGTTGTTCTTGTATA
CAACTCGCTTGGGTGGAAACGAGAAGACGTCATTCGTATACCAGTTTTCAGTGATTCGAT
TGTCGTTCATGATTCTGAAGGACGAGAAATTGAATCACAACTTCTGCCTATAGCTACAGC
CTCGTTGAACATAAGAGAAAAACATGTCAAGGCTTACCTGGGCACAACGCCAGGTGCAAA
GCCCAAGTTTTGGCTTGCTTTTCCTGTGTCTGTTCCACCTCTTGGTTTCAATACTTATTT
TGTCTCAAACTTGAAGAAATCAGCACATATTTCTTCGAAGTCCACTCAGTACTCACCTCA
AGGAAGTGAAAGTAGTAATCTACAAGTTGGTCAAGGCAACTTGAAACTTCAATATAATGA
AGCTGGAAAATTATCCCTGTACTCCGATAGTAAGACTATGGTTCAAGCAAACTTTGAGCA
GAAATACAAGTATTATATTGGACAGGATGGAAATGGAAGTGATCCTCAGGCTTCTGGAGC
ATACATATTCCGCCCTAATGGCACAGTTCCAATCAGTACTGATGGGCAGGTTTCTCTCAC
AGTTCTGCGTGGGCCCATATTGGATGAAGTGCACCAGCAGATAAATTCATGGATTTTTCA
GATTACCAGGCTTTACAAGGAGAAGGACTTTTTGGAAACTGAATTTATAGTTGGGCCCAT
ACCAGTAGATGATGGAAATGGAAAAGAAGTAGCAACTGAAATTGTTACAAACATGGTTAC
AAACAAAACATTCTACACTGATTCCAGTGGACGTGATTTCATCAAAAGGATAAGAGATTA
TCGATCGGAGTGGAAGATTGAAGTGCACCAGCCTATTGCTGGAAACTATTATCCTGTTAA
TCTTGGCATCTATGTGGAGGATGGCAGCAAAGAGCTGTCTGTACTGGTAGACAGGTCAAT
TGGAGGTTCCAGTATAAAGGATGGACAAATAGAGCTAATGCTACACAGGAGGCTACTCCA
TGATGATGGGAAAGGCGTCGCCGAGGCGCTAAATGAAACAGTCTGTCTCGATAAGCAATG
TGAAGGACTCATTATACAAGGAAAATACTATGTCAAAATAGACCCACAAGGAGAAGGAGC
TCGGTGGCGTCGGACATTTGGCCAGGAAATATACTCCCCTCTCCTTCTTGCTTTCACAGA
GCAGGATGGAGGCAACTGGGCGAATTCACATGTTGCAAAATTCTCTGCGATGGATTCAAC
TTACAGCTTGCCTGATAATGTTGCAATGCTTACCCTTCAGGAGCTTGAAGATGGAAGTGT
TCTCCTTCGGTTTGCTCATCTATATGAGGCCGGGGAGGACAAGGATCTTTCGTCTTTAGC
GAGTATCGACCTCAAGAGAGTGTTCCCGGAGAAGAAGATTGGCAAGGTCATCGAGACAAG
CTTATCGGCAAACCAAGAACGCGCAGCCATGGAGAAGAAGCGTTTGAAATGGAAGGCGCA
AGGTTCTGCGGCTGACGAGAAGGTGGTTCGGGGTGGCCCTGTGGATCCTTCGAAGCTCGT
CGTTGAGCTGGGGCCAATGGAGATCCGCACATTCATCGTCAGCTTTGATCACATCAGTGA
CAAGCAACAGCTATAATCGTCTCCGACTAGACGACTATGTCTGGATGAAGTTGTCTTGCG
GCTTCCAAATAAAAAAAATAATGTGGCCTGCTGTGTACCTGTGGTTCAACCCATGATATG
GCCTGCTGTGGGTCAGCACGGTTCTAAAGCTAAGGACGTTTTAT