Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007366_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:229771474:229779655:-1 gene:Zm00001d007366 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain-containing protein

Sequence

ATGTCAATGGCGGCAGCCGCCGCCCCCGCCGCGGCATCATCCACGCTGCTGCGGGCAAGC
AACTTCTCTATTGCGCGCCCCGTCCCAAGCGGCGTTGTCTGCTGCATCCGCGCCGTCAGT
GGGCGGAGAGCATCGGTAGTGCGCGTGGCAGCGGCTGGCGACAGGGCCGCGCCGGCCGGT
GCCTTTCCGGCGGCGCTGTTGTTCGATTGCGATGGTGTGCTGGTGGACACTGAGAAGGAT
GGCCACCGCATCTCCTTCAACGAAACCTTCGCCGAGAGGGAATTAGGTGTCAGCTGGGAT
GTTGAACTGTATGGAGAATTGCTCAGGATAGGTGGTGGAAAGGAAAGGATGACAGCTTAC
TTCAACCAGACAGGATGGCCGGCTAAAGCACCAAAGACAGATGACAAAAGAAAGGAGTTC
ATAGCTTCTCTTCACAAGAGGAAAACAGAATTATTCATGGCCCTAATTGAGAAAAAGTTG
CTTCCTCTCCGTCCAGGTGTTCAAAGGTTAATCGATGAAGCTTTAGGAAAGGCAGTTAAA
GTTGCAGTGTGCAGTACATCAAATGAGAAAGCTGTTTCAGCAATAGTGTCGTACTTATTG
GGGCCTGATAGAGCTGATAAGATTACCATATTTGCTGGAGATGTGGTTCCTCACAAAAAA
CCTGACCCAGCAATCTACATATTAGCAGCAACTACACTTGGAGTTGATCCACAAAGCTGT
GTTGTTATTGAAGACAGTACTATAGGGCTCGCAGCGGCAAAAGCTGCCGGCATGAAGTGT
ATCGTAACAAAAAGCGGCTACACTGCAGAAGAGGACTTCGAGACAGCAGATGCAGTGTTC
GATTGCATTGGTGACCCGCCAGAAGTGCGCTTCGATTTGGATTTCTGCGCCAAGTTGCTC
AAGAAACAATATGTGAGCTGA

Peptide Sequence

PEP ID

Zm00001d007366_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:229771474:229779655:-1 gene:Zm00001d007366 transcript:Zm00001d007366_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain-containing protein

Sequence

MSMAAAAAPAAASSTLLRASNFSIARPVPSGVVCCIRAVSGRRASVVRVAAAGDRAAPAG
AFPAALLFDCDGVLVDTEKDGHRISFNETFAERELGVSWDVELYGELLRIGGGKERMTAY
FNQTGWPAKAPKTDDKRKEFIASLHKRKTELFMALIEKKLLPLRPGVQRLIDEALGKAVK
VAVCSTSNEKAVSAIVSYLLGPDRADKITIFAGDVVPHKKPDPAIYILAATTLGVDPQSC
VVIEDSTIGLAAAKAAGMKCIVTKSGYTAEEDFETADAVFDCIGDPPEVRFDLDFCAKLL
KKQYVS

Transcript Sequence

Transcript ID

Zm00001d007366_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:229771474:229779655:-1 gene:Zm00001d007366 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain-containing protein

Sequence

CCCACAACACCAAACGCCACCTGTAAAATCCTCACGCCACATCTTCAGCCACAGGCGCGC
GATATCCCCGCTCAAAAAAGCCATGTCAATGGCGGCAGCCGCCGCCCCCGCCGCGGCATC
ATCCACGCTGCTGCGGGCAAGCAACTTCTCTATTGCGCGCCCCGTCCCAAGCGGCGTTGT
CTGCTGCATCCGCGCCGTCAGTGGGCGGAGAGCATCGGTAGTGCGCGTGGCAGCGGCTGG
CGACAGGGCCGCGCCGGCCGGTGCCTTTCCGGCGGCGCTGTTGTTCGATTGCGATGGTGT
GCTGGTGGACACTGAGAAGGATGGCCACCGCATCTCCTTCAACGAAACCTTCGCCGAGAG
GGAATTAGGTGTCAGCTGGGATGTTGAACTGTATGGAGAATTGCTCAGGATAGGTGGTGG
AAAGGAAAGGATGACAGCTTACTTCAACCAGACAGGATGGCCGGCTAAAGCACCAAAGAC
AGATGACAAAAGAAAGGAGTTCATAGCTTCTCTTCACAAGAGGAAAACAGAATTATTCAT
GGCCCTAATTGAGAAAAAGTTGCTTCCTCTCCGTCCAGGTGTTCAAAGGTTAATCGATGA
AGCTTTAGGAAAGGCAGTTAAAGTTGCAGTGTGCAGTACATCAAATGAGAAAGCTGTTTC
AGCAATAGTGTCGTACTTATTGGGGCCTGATAGAGCTGATAAGATTACCATATTTGCTGG
AGATGTGGTTCCTCACAAAAAACCTGACCCAGCAATCTACATATTAGCAGCAACTACACT
TGGAGTTGATCCACAAAGCTGTGTTGTTATTGAAGACAGTACTATAGGGCTCGCAGCGGC
AAAAGCTGCCGGCATGAAGTGTATCGTAACAAAAAGCGGCTACACTGCAGAAGAGGACTT
CGAGACAGCAGATGCAGTGTTCGATTGCATTGGTGACCCGCCAGAAGTGCGCTTCGATTT
GGATTTCTGCGCCAAGTTGCTCAAGAAACAATATGTGAGCTGAAAGGGGGCTAGTGCAAG
TGATATACCAAGTACGAGGTTCCTGAATATGGAGAAAGAGTCCATGGCATGCCAATGTTG
GTTCTTCAAGCCATGACCTGATACTAGGACTTGGAAGTCCACGTTCTACCCAATAGTAAC
TTATAGAATGACATTCACTACTGCCCACCCAGTTGGCAGTTGCAAATGTGTTAGTCATTC
AACAAATTGGAAACCACTCGAATAAGGGATCACCAAGTCCAAACTCTTCAGTCAAAGCAA
TAACAATTGAGGTTACGAG