Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007345_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:229255461:229261482:1 gene:Zm00001d007345 gene_biotype:protein_coding transcript_biotype:protein_coding description:11-beta-hydroxysteroid dehydrogenase-like 5
Sequence

ATGATGAGCAAGGAGGCAGTGGTGAACGCGTTCCTGGGCTGCTTCATGCACGTGGGGCTG
GCGCTGGTGCTCGCCGTCTACCTCCCCGTGGCCTTTGTGTGCCGCCTCCTCCACCGCCTC
CTCGTCCGCCCCTTCGCCAGGGGCGAGGACCTCCGCGGCAAGGTCATCCTCGTCACCGGC
GCGTCCTCCGGCATCGGCGAGCACCTGGTGTACGAGTACGCGAGGCACGGCGCGTGCGTG
GCGCTGGTGGCGCGCACGGAGGTGGCGCTGCGCGCCGTGGCCAAGGCGGCGCGCGACCTG
GGCGCCCCCGACGTGCTGGTCGTGCCGGCCGACGTCACCAAGGTCGACGACGCCAAGCGC
GCCGTCGAGGAGACCGTCGCGCACTTCGGCAAACTGAATCACTTGGTGGCCAACGCCGGG
ATCTGGTCCAGCTGCTTCTTTGAAGAGATCACCAACATAACCGCCTTCCATAATGTTATT
GATCTCAACTTCTGGGGTGCCGTGTACCCGACCTACTTCGCGCTGCCGTACCTCAAGGCC
AGCCGGGGCAACATCGTGGTGACCGCCTCCGTCGCCGGCAGGGTGCCGACAGCCAGGATG
AGCTTCTACAACGCAAGCAAAGGCGCCGTGATACGTTTCTACGAGACGCTGAGGGCTGAG
CTGGGGTCCCACGTGCACGTCACCATCCTCACGCCCGGCTACGTCGTCTCCAACCTCACC
AAGGGCAAGGGCCTCCAGAAGGACGGCCATGTCGGCATCGACGAGGAGGCCCGCGACATC
AACGTGGGGCCGATGCCGGTGGGCAAGACGGAGTCGCTGGCCGAGGTGGTGGTGGCGAGC
GTGCGCCGTCGGGACTACTACGTCACGTGGCCCGGCTGGTACTGGCCCTTCCACATGGTC
ATGTGCGCCGCGCCCGAGCTGGTGGACTGGTTCTCCCGCACCTTCTACGTCTCCAAGTCC
GGCGACCAGGACGGCGGCGGCGGCGCGCTCAGCAAGAAGATCCTGGAGGCCGTCGGCGGG
AAGAAGTTCCTCTACCCCCAGACCATACGCTCACAGACCGCCATGGCACCCAATAACTGA

Peptide Sequence

PEP ID

Zm00001d007345_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:229255461:229261482:1 gene:Zm00001d007345 transcript:Zm00001d007345_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:11-beta-hydroxysteroid dehydrogenase-like 5
Sequence

MMSKEAVVNAFLGCFMHVGLALVLAVYLPVAFVCRLLHRLLVRPFARGEDLRGKVILVTG
ASSGIGEHLVYEYARHGACVALVARTEVALRAVAKAARDLGAPDVLVVPADVTKVDDAKR
AVEETVAHFGKLNHLVANAGIWSSCFFEEITNITAFHNVIDLNFWGAVYPTYFALPYLKA
SRGNIVVTASVAGRVPTARMSFYNASKGAVIRFYETLRAELGSHVHVTILTPGYVVSNLT
KGKGLQKDGHVGIDEEARDINVGPMPVGKTESLAEVVVASVRRRDYYVTWPGWYWPFHMV
MCAAPELVDWFSRTFYVSKSGDQDGGGGALSKKILEAVGGKKFLYPQTIRSQTAMAPNN

Transcript Sequence

Transcript ID

Zm00001d007345_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:229255461:229261482:1 gene:Zm00001d007345 gene_biotype:protein_coding transcript_biotype:protein_coding description:11-beta-hydroxysteroid dehydrogenase-like 5
Sequence

CCCCCTGCAGGTGCAGCAACCCCCACCCACCCGTTATTATTATGATTATTTTATTAATAA
TTTCCTTCACCATCTCCTCTCCGGCCAGGCACCCATAAATACCATACCACGCCAGGGCAT
CACACACCGTACCTCCGGCGCCTCCGACTCCGGTCCTCCGGCCTGCGCAGGCTAGCTAGC
TCTATTTAGGTCCACCGTGCCCCCGCCGCGCAGGCAGGGGAGATCCAAGGGTCCGAGCAG
AAGGCCGCCGGCGGCGAGCCAGCCAGCCAGCTAAAGCGATCCATATATACATATATACTA
TCGAGCAACACGTAAGGAAGGAAGGAAGAAAGAAGCCAAGCCCACCAGGGCCAGGGAAGA
GAGCATAGCTAAGGAAGGAAGGAAGGAAGATGATGAGCAAGGAGGCAGTGGTGAACGCGT
TCCTGGGCTGCTTCATGCACGTGGGGCTGGCGCTGGTGCTCGCCGTCTACCTCCCCGTGG
CCTTTGTGTGCCGCCTCCTCCACCGCCTCCTCGTCCGCCCCTTCGCCAGGGGCGAGGACC
TCCGCGGCAAGGTCATCCTCGTCACCGGCGCGTCCTCCGGCATCGGCGAGCACCTGGTGT
ACGAGTACGCGAGGCACGGCGCGTGCGTGGCGCTGGTGGCGCGCACGGAGGTGGCGCTGC
GCGCCGTGGCCAAGGCGGCGCGCGACCTGGGCGCCCCCGACGTGCTGGTCGTGCCGGCCG
ACGTCACCAAGGTCGACGACGCCAAGCGCGCCGTCGAGGAGACCGTCGCGCACTTCGGCA
AACTGAATCACTTGGTGGCCAACGCCGGGATCTGGTCCAGCTGCTTCTTTGAAGAGATCA
CCAACATAACCGCCTTCCATAATGTTATTGATCTCAACTTCTGGGGTGCCGTGTACCCGA
CCTACTTCGCGCTGCCGTACCTCAAGGCCAGCCGGGGCAACATCGTGGTGACCGCCTCCG
TCGCCGGCAGGGTGCCGACAGCCAGGATGAGCTTCTACAACGCAAGCAAAGGCGCCGTGA
TACGTTTCTACGAGACGCTGAGGGCTGAGCTGGGGTCCCACGTGCACGTCACCATCCTCA
CGCCCGGCTACGTCGTCTCCAACCTCACCAAGGGCAAGGGCCTCCAGAAGGACGGCCATG
TCGGCATCGACGAGGAGGCCCGCGACATCAACGTGGGGCCGATGCCGGTGGGCAAGACGG
AGTCGCTGGCCGAGGTGGTGGTGGCGAGCGTGCGCCGTCGGGACTACTACGTCACGTGGC
CCGGCTGGTACTGGCCCTTCCACATGGTCATGTGCGCCGCGCCCGAGCTGGTGGACTGGT
TCTCCCGCACCTTCTACGTCTCCAAGTCCGGCGACCAGGACGGCGGCGGCGGCGCGCTCA
GCAAGAAGATCCTGGAGGCCGTCGGCGGGAAGAAGTTCCTCTACCCCCAGACCATACGCT
CACAGACCGCCATGGCACCCAATAACTGACAACCTACATATATATATATATATGTCATTT
ATGAGAATGCACGGTCGATCTGTTGTTGGATTAGAACAGTACGTGATGATCGAACGTACG
GGCCGGCACGGGTGAAATTGTTTATTCGTTTCGTTTCGGGGTTTTTTCTTCTTCATTTCC
TCTGCCTTTTCTCCACTTCCGATTTTACAAATGGTCAATGTGTATGAAGTAATTAATACG
AATGTTCATTCGTGGTTGGCTTGCATTGTACGCCCCGTGATATTGGGGCATGCATGGGTG
CAAATTGCAAAGTTGATGTACCTATATAGGTTTTGTTTGAATTTAACATCTCAAGTTAGA
ACTCACGAAAGTTGACATACAATTGGCTATATTTACTAGGGTTTACTCGAAGTTACACCG
TTAATATACAATAGGATAAGTTTTGCTTGAATTGCATGGACAAACTGCTAGGTTGGACTA
TGTTATTAGAAAATTGTTTAAGATTTGTATACCTGAACTGGTGTAGCTATCATAGGGCTC
CATTATGGTGTGGCAACAACGGTGGCAGTCAAAACTCTAGGAGAACTATGTTTAGACCAT
ATTGCTGGAATGGTACATATTAAACAAATGTATTAGTATTACAGATGTTGTTTTCAAATC
TATGAATGAAAAATAAGCATCAATCATGGTT