Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007302_T014
CDS Infomation

cds chromosome:B73_RefGen_v4:2:227315317:227320470:-1 gene:Zm00001d007302 gene_biotype:protein_coding transcript_biotype:protein_coding description:EMB2756

Sequence

ATGGCGCAGTACAGGCAGCAGTACGGCGGTGGCTTCTCCGACTCCCGCGGCCATCAGCAC
CAGGCGCTCCCGGACTGGCACCGGCCTCACCACGCCTCTGCCAAGCCATCCTCCCGGATC
CGCCGCCCCGGGAAGCCCGCGCCGCGCCGCCGATCGCCTGCCGCTGCCGTTGCCGCCGCG
CTCCTCCTCCTTGCCGCCGTCTTCCTCCTCTCGCGCCGCATTTCACGCAGTTCTGCAGTA
GAGGTCAGCCAAGATTCGAGCGCCGGGGAGGCGTTGCCAGAGTGGAACCAGAGCAAAAGC
TGGAAGAAGCTCAAGTTCGGGCAAGGCGGAGGTGGCCGGAGCGCGCGAGACTCCAGGTAC
TGGGACCGGGACGATAGGCGCCGCGACGAGGACTACACTGAGGACGAGAAGGAGAAGAAC
TCAGGTGGAACTGGGGCCTCCACAGATGCTGGTGGCAGTGGCGATAAAGGTACCACCTCT
GAGGCAGGTGGCGAGGATAAAGGATTGACTCTAGAGACTGGCAGTGGCGCTAAGGATGTT
CCAGAGGCGTCTGAAGGTGGGAAAGCAGGGACCTTGTACAATGAGGGTGGCAGGAAGGAG
CTGGCGCAGTATGAGGCTGCAGCCATGGGAGCCACAGGAACAGGGGTGAAGGAGGTTGAT
CCAGACGATGAGTATGATGATGGCATCGATATGCAGGATGATTTGGAGGATGCTCATCTG
CATTCATCTGATGGTGGGAGGAAGCTTGGTGGTGGCAGCCATGAGAGTGTTGAGGAGAAG
GACGATGTAACTACTGAGAGGCGCACAGAAGCAGGTGGAGGGATCGCTGATAATCATGAT
ATTACTAGTCCAGACAAAAAGAAGGTTTCAGGTACTGGAGATAAGAAGCATGTGTCCAAG
AAGAAACCAAAACGTAAGAAGTCTGGTTCAACTTGTGAAATGAAGTTTCTCAACTCAACC
GCTCAGCTTGTGGAGCCTGGGAGAAATGAGAGATTCTCTAGTTTTAATTTGAAGTATGTA
GAAGTTGAAGAAAGACCTATTGGATCAGAATATTGGGAACCGAGATTTGCCGGCCACCAA
AGTCTGCAAGAAAGAGAGGAGTCATACAAAGCCCATGACCAACAGTTGACATGTGCTTTT
GTTAAGGGTCCAAATGGTACAAGCACTGGTTTTGATATATCTGATGATGATCGAAAGTAC
ATGAGTAAATGCCACATTGCTGTATCATCCTGCATCTTTGGAAATTCTGATCGACTGAGG
ACTCCATTTAGCAAAACGATTACAAGCCTCTCAAAGAAGACAGTTTGCTTTGCTATGTTT
TTGGATGAAGTCACATTGCAAACTTTAGAATCTGAAGGCCAGAAAATGGACGGCATGGGT
TTCATTGGTATATGGAAGATCATATTGATTAAGAATATGCCGTATAATGACATGCGTAGA
GTGGGGAAAATACCAAAATTTTTGGCACACAGGCTATTTCCATCATCGAGGTAA

Peptide Sequence

PEP ID

Zm00001d007302_P014
PEP Infomation

pep chromosome:B73_RefGen_v4:2:227315317:227320470:-1 gene:Zm00001d007302 transcript:Zm00001d007302_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:EMB2756

Sequence

MAQYRQQYGGGFSDSRGHQHQALPDWHRPHHASAKPSSRIRRPGKPAPRRRSPAAAVAAA
LLLLAAVFLLSRRISRSSAVEVSQDSSAGEALPEWNQSKSWKKLKFGQGGGGRSARDSRY
WDRDDRRRDEDYTEDEKEKNSGGTGASTDAGGSGDKGTTSEAGGEDKGLTLETGSGAKDV
PEASEGGKAGTLYNEGGRKELAQYEAAAMGATGTGVKEVDPDDEYDDGIDMQDDLEDAHL
HSSDGGRKLGGGSHESVEEKDDVTTERRTEAGGGIADNHDITSPDKKKVSGTGDKKHVSK
KKPKRKKSGSTCEMKFLNSTAQLVEPGRNERFSSFNLKYVEVEERPIGSEYWEPRFAGHQ
SLQEREESYKAHDQQLTCAFVKGPNGTSTGFDISDDDRKYMSKCHIAVSSCIFGNSDRLR
TPFSKTITSLSKKTVCFAMFLDEVTLQTLESEGQKMDGMGFIGIWKIILIKNMPYNDMRR
VGKIPKFLAHRLFPSSR

Transcript Sequence

Transcript ID

Zm00001d007302_T014
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:227315317:227320470:-1 gene:Zm00001d007302 gene_biotype:protein_coding transcript_biotype:protein_coding description:EMB2756

Sequence

CTCTGCGTTCATGGTGCTGGTGGCCGTCGACCGCCACCTCCGCTGCGGGGGCCTCTAATG
GCGCAGTACAGGCAGCAGTACGGCGGTGGCTTCTCCGACTCCCGCGGCCATCAGCACCAG
GCGCTCCCGGACTGGCACCGGCCTCACCACGCCTCTGCCAAGCCATCCTCCCGGATCCGC
CGCCCCGGGAAGCCCGCGCCGCGCCGCCGATCGCCTGCCGCTGCCGTTGCCGCCGCGCTC
CTCCTCCTTGCCGCCGTCTTCCTCCTCTCGCGCCGCATTTCACGCAGTTCTGCAGTAGAG
GTCAGCCAAGATTCGAGCGCCGGGGAGGCGTTGCCAGAGTGGAACCAGAGCAAAAGCTGG
AAGAAGCTCAAGTTCGGGCAAGGCGGAGGTGGCCGGAGCGCGCGAGACTCCAGGTACTGG
GACCGGGACGATAGGCGCCGCGACGAGGACTACACTGAGGACGAGAAGGAGAAGAACTCA
GGTGGAACTGGGGCCTCCACAGATGCTGGTGGCAGTGGCGATAAAGGTACCACCTCTGAG
GCAGGTGGCGAGGATAAAGGATTGACTCTAGAGACTGGCAGTGGCGCTAAGGATGTTCCA
GAGGCGTCTGAAGGTGGGAAAGCAGGGACCTTGTACAATGAGGGTGGCAGGAAGGAGCTG
GCGCAGTATGAGGCTGCAGCCATGGGAGCCACAGGAACAGGGGTGAAGGAGGTTGATCCA
GACGATGAGTATGATGATGGCATCGATATGCAGGATGATTTGGAGGATGCTCATCTGCAT
TCATCTGATGGTGGGAGGAAGCTTGGTGGTGGCAGCCATGAGAGTGTTGAGGAGAAGGAC
GATGTAACTACTGAGAGGCGCACAGAAGCAGGTGGAGGGATCGCTGATAATCATGATATT
ACTAGTCCAGACAAAAAGAAGGTTTCAGGTACTGGAGATAAGAAGCATGTGTCCAAGAAG
AAACCAAAACGTAAGAAGTCTGGTTCAACTTGTGAAATGAAGTTTCTCAACTCAACCGCT
CAGCTTGTGGAGCCTGGGAGAAATGAGAGATTCTCTAGTTTTAATTTGAAGTATGTAGAA
GTTGAAGAAAGACCTATTGGATCAGAATATTGGGAACCGAGATTTGCCGGCCACCAAAGT
CTGCAAGAAAGAGAGGAGTCATACAAAGCCCATGACCAACAGTTGACATGTGCTTTTGTT
AAGGGTCCAAATGGTACAAGCACTGGTTTTGATATATCTGATGATGATCGAAAGTACATG
AGTAAATGCCACATTGCTGTATCATCCTGCATCTTTGGAAATTCTGATCGACTGAGGACT
CCATTTAGCAAAACGATTACAAGCCTCTCAAAGAAGACAGTTTGCTTTGCTATGTTTTTG
GATGAAGTCACATTGCAAACTTTAGAATCTGAAGGCCAGAAAATGGACGGCATGGGTTTC
ATTGGTATATGGAAGATCATATTGATTAAGAATATGCCGTATAATGACATGCGTAGAGTG
GGGAAAATACCAAAATTTTTGGCACACAGGCTATTTCCATCATCGAGGTAAGAGTGAGTT
TCTCTATGACAATGCATGTCTAATTTTATAATGAGTTTCTTGGTAGTCCTTTTCTTGAAA
TATTTTATTTTAGTGAGTTACTCAAATTTTAACCTTATATACTCTTAAAAATAATTTGGT
TGACACACTTTTTGAGTGTTGTTATTTCATATGTGCATGCATATCATCTTTTCAAGAGAA
AACCAGTGTTTTAAAGGCGTCGCCTAGGCGTCCAGACGGTGGTCTAGTGTCTTGCCTCGC
GATACCGCCTTAAGAACCATGGAGAAAACAAAGTTGTTTGCAACCTTTTGCCTTTCTCTG
GGGCCACCTCTCTGCCCGCAGTTCACATTACACATTCCAACAGTCCCACTTTTGGAACTC
ATCCTGATCACATGGCTCCACATGCTTTTCTGCATGACTGATACTCGAAGTAGTAATCCA
TTCTTCAATTCTTGAGATGTCAGCTTATCACTGTTACTGTTATCACTTTCCAGGTCCGTC
AACATCTTCTGGATGTATATGATTGTGATATTTATTTGTGGTTTGCTATATTGTCCAATT
GCATTACAATCTACATGCAACAAATTTTTTTTGCACACATAGATATACTGCTTTTGAGTT
CATCCGTGTAATAAGTTTATAAATATATCACTTGATTTAACTATTAGGATACTTACAGTT
GAAGCCGTAAATGTTTACAAATTTTACAAATATTCTATGAGAGATTTAGAGAAACACGCA
ACAATCCTTTTTGATATATTTTGCTGCAAATACGAGTAAATTTGCATATTCACTTTATGG
AAGTACTAATATGCTCATTCATAGTACTGTATGGAAGTAATAATTTGTATATTCACACAT
ATATATAATACATACACCGACTCACTGAGTATTGTATTAATTCACTAAAAAGGCAAAACG
GATTTTATTTTGGTACAGAGGGAGTAATAATTTAGAATACCTTGTGCTCAACTCCGCATC
CTGCAAGGATTCCTTGTATTTGTTCTTTAATTTTATTTATTTGTACTTACCACCTGTAAT
GATGCTGCCATCTAAGCACATTGTTACTTGTATCAGGTTCTCAATCTGGTTAGACAGCAA
ACTGAGACTACAAACTGATCCTATCCTTATCCTAGAGTATTTTCTCTGGCGGCATGGTTA
TGAATATGCTATTTCCAATCACTATGATCGCCATTGTGTTTGGGAGGAAGTAGCACAAAA
TAAAAAGCTGAACAAGTTCAACCACACAATAATTGACCAGCAATTTGAGTTTTATCAAGC
GGATGGACTGACAAGGTTCAACCCATCGGATCCCAGCAGGCTTCTACCAAGCTATGTCCC
TGAAGGCTCTTTTATCGCAAGAGAGCACACACCGATGTCCAACTTATTTTCCTGCCTGTG
GTACAATGAAGTTGATCGATTCACACCTCGTGACCAGCTCAGCTTTGCATATACATACTT
AAAACTGAGAAGGACAAATCCTGACAGACCATTCCGTCTCAATATGTTTAAGGATTGTGA
GAGACGATCAATAGCGAAGCTATTCCATCACCGGACAGAAGAGAGACACAACAGTGCACA
ATTAACAAGATGACACATCCTTCCTAGTGATGGAGGGCAGAAGAGAGAGGTCAGGGATTG
TATTCTTTGATATAGTTCAGCTATCCACAAGACTCTCCATTGAAACTTTATGCCCCTGTC
TAGGAGTTTGTACTTTATATAATGCAAGCCTTCTTTCCTTTG