Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007295_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:2:226994219:227000352:-1 gene:Zm00001d007295 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional corepressor SEUSS
Sequence

ATGATGCCGTCGGGTCCGCCGAACCCGATGGGGCACGGGCAGCCAGTGGGCGGCGCTGCC
CCGTCGCTACTCCGGACGAGTTCTTCCCTGCTCAGTGGCGGTGGTCAGCCGGGTATGGGC
GGAGGTGGTGGTGGCATGCTTTCTTCACAGTCGCCCTTCTCTTCCCTTGTCTCCCCACGC
ACACAGTTTGGTGGCAACGGTCTTCTGGGAGGTGCCTCTCTGCTGAACCGGCCGCCATTC
GGGAATGGTGGCCCTATGCCAGGTCCAGGGTCAATGCAGGCTGTTGGGATGCAGATGAGT
ACACTCCAGCAGAGAGCTGGGCTGGATGGTGCCAGCGATTTCATTAGCGCGGAAGGGTCG
GATCCTCTATCATTCCCGTCTTCTTCACAGGTCAATTTGGGCAATCAGATGGGATCAGAT
AATCTGCAGGCGACTTCGCAGCAGCAGCAGCAGCAGATGGATGCCATGCAGGATATGCAA
CAGCAGCTACCAATGTCTTACAACCAGCAACAGTTGCCACCACAACACTCGCAGCAGCTC
CAGCAGCCACAGGCTACAGTCAAGTTAGAGAATGGAGGAAGCATGATTAGCATCAAACCA
GAGCAGCAGATGGCACAACCTGACCAGATGATGCGAAGTGCTAGTGGTGTGAAACTTGAG
CCACAGCAGCTGCAAGCCCAGATGATGAGAAGTTTAAGTTCAGTCAAGATGGAGCAACAG
ACTTCTGATTCATCAGCATTCCTGCAGCAGCAGCAACAACAACAACATTTGTTGCAGCTG
ACAAAACAGATTCGAAATTGTCCGGAGCTTGTATCAATAGGTGGACCAAATGCAATTGCA
AACCCTCAAGCTGCCACAGCTGCTCAACTGACCCTCTTGCAGCAGCAACGGCTTCTGCAT
ATGCAACAGCAGCAGCAACAACAGATTCTAAAGAACTTACCTTTGCAGAGAAACCAGTTG
CAGCAACAGCAGCAGCATCAACAGCAGCAGCAGTTACTTCGTCAACAGAGTCTAAACATG
AGAACTCCAGGAAAGTCGTCTCCTTATGAGCCAGGAACCTGTGCAAAGAGATTGACTCAT
TACATGTATCATCAACAAAACAGACCACAAGATAACAACATTGAATACTGGAGAAACTTT
GTCAATGAGTATTTTGCTCCAAACGCTAAAAAGAGGTGGTGTGTCTCGCTTTATGGAAGT
GGTCGTCAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAGATTTGTAATCGG
AAACCTGGCCGGGGTTTTGAAACAACAGTTGAGGTACTACCGCGATTATGCCAAATTAAA
TATGCCAGTGGTACACTTGAAGAACTTTTGTACATCGACATGCCACGTGAGTCCCAGAAT
ACGTCTGGGCAGATTATTTTGGATTACACAAAAGCAATCCAAGAAAGTGTCTTTGAGCAA
TTGCGTGTTGTACGAGAGGGGCATCTAAGGATAGTTTTTAATCCAGACCTTAAGATTGCA
TCTTGGGAGTTTTGTGCTAGGCGTCATGAAGAACTTGTTCCGCGGAGATCTATAATACCG
CAGGTTAGTAATCTTGGCGCGGCTGTACAAAAGTACCAGGCCGCCACACAAAATTCGACG
AGTTTGTCAGCTCAGGACATGCAGAATAATTGCAACTCGGCACTGGAGGTTCCTTTAGTA
AATGATTTAGGATACACAAAACGATATGTTCGCTGCCTTCAGATTGCCGAGGTCGTAAAC
TGTATGAAGGATTTGATTGATCACAGCAGGCAGACTGGATCTGGACCCATTGATAGCCTG
CATAACTTGCCACGGAGGACACCTTCAGGGGCCAGCACTCTTCAACCACAGCAGCAGCAA
ACTGAGGAGAAGCAGGCCATTCCCCAGAGTTCAAACCAGAGTGGTCAAAATTCTGCTCCT
ATGGCTGGTGTGCAGCCTTCTGCCTCTGCCAATGGTGATGTGACATCAAATGTTACTCTC
AGTTGTGCACCTTCTACATCTGCGCCTTCACCATCAGTTGTTGGGCTCTTGCAAAATTCA
ATGAATTCTAGACAAGACCATGCAATGAGCAGCAACAACGGTGGTCCATATAGTGGAGGC
AATGTGGCTATTCCGAAGGTGAACTCTACAAGCTCGCTGCACTCAAACCCACCTACATCT
TTCCCTTCCCCAGCACCGACAACGTCCAATAATAGCATGATGCCCGCTCCTCAAAATACA
AATCAACTAAGCTCCCCAACGACATCACCAAGCATACCTCCGATGCAGCCACCTGCTGCT
CGGCCTCAGGAGGCCGAGCCAAGTGACTCGCAAAGCTCGGTTCAGAAGATCTTGCAAGAC
CTGATGTCGTCGCAGATGAATGGTGTTGGCCACTCGGGGAATGACACGAAGACACCGAAC
GGACTAACCCATGGTGCTAATGGGGTTAACTGCTTACTCGGCAATGCTGCCGCGAATAAC
TCGGGGATAGGAGGAATGGGATTTGGCGCCATGAGCGGGTTCGGTCATGGGATGAGGACG
GCAATGGCGAACAATCCGATGGCGATGGGTGCAAGGATGGGAATGAACCACGGTGCACAC
GACCTATCGCAGCTGGGTCAGCTACAGCACCAGCAGCAACATCAGCAGCAGCATGACATA
GGAAGCCAGCTGCTGGGCGGATTTAGATCAGGGAACAGCTTCAATAACATGCAGTATGAC
TGGAAACCCTCACAATAG

Peptide Sequence

PEP ID

Zm00001d007295_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:2:226994219:227000352:-1 gene:Zm00001d007295 transcript:Zm00001d007295_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional corepressor SEUSS
Sequence

MMPSGPPNPMGHGQPVGGAAPSLLRTSSSLLSGGGQPGMGGGGGGMLSSQSPFSSLVSPR
TQFGGNGLLGGASLLNRPPFGNGGPMPGPGSMQAVGMQMSTLQQRAGLDGASDFISAEGS
DPLSFPSSSQVNLGNQMGSDNLQATSQQQQQQMDAMQDMQQQLPMSYNQQQLPPQHSQQL
QQPQATVKLENGGSMISIKPEQQMAQPDQMMRSASGVKLEPQQLQAQMMRSLSSVKMEQQ
TSDSSAFLQQQQQQQHLLQLTKQIRNCPELVSIGGPNAIANPQAATAAQLTLLQQQRLLH
MQQQQQQQILKNLPLQRNQLQQQQQHQQQQQLLRQQSLNMRTPGKSSPYEPGTCAKRLTH
YMYHQQNRPQDNNIEYWRNFVNEYFAPNAKKRWCVSLYGSGRQTTGVFPQDVWHCEICNR
KPGRGFETTVEVLPRLCQIKYASGTLEELLYIDMPRESQNTSGQIILDYTKAIQESVFEQ
LRVVREGHLRIVFNPDLKIASWEFCARRHEELVPRRSIIPQVSNLGAAVQKYQAATQNST
SLSAQDMQNNCNSALEVPLVNDLGYTKRYVRCLQIAEVVNCMKDLIDHSRQTGSGPIDSL
HNLPRRTPSGASTLQPQQQQTEEKQAIPQSSNQSGQNSAPMAGVQPSASANGDVTSNVTL
SCAPSTSAPSPSVVGLLQNSMNSRQDHAMSSNNGGPYSGGNVAIPKVNSTSSLHSNPPTS
FPSPAPTTSNNSMMPAPQNTNQLSSPTTSPSIPPMQPPAARPQEAEPSDSQSSVQKILQD
LMSSQMNGVGHSGNDTKTPNGLTHGANGVNCLLGNAAANNSGIGGMGFGAMSGFGHGMRT
AMANNPMAMGARMGMNHGAHDLSQLGQLQHQQQHQQQHDIGSQLLGGFRSGNSFNNMQYD
WKPSQ

Transcript Sequence

Transcript ID

Zm00001d007295_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:226994219:227000352:-1 gene:Zm00001d007295 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional corepressor SEUSS
Sequence

ACACAGAGTGACAGCGCGCACCAAACCAAATCCCATCGCGAGATAACAAAACCAGGCCAA
CGGATTCTTTTGGCTGCGGTGGCGTTGCCGGTGCCGGTGGTGCAGCAGCTGCTGTTGGTG
CCCTGTCGCTGTGCCGCCGCCGAGGTCGGCTCGCGTGTCCGGCGGCCTAAACCCTAGCCG
GCGCTGGAGCCGCTGAGGCGGGCGCCCTGCAGCACCCCTCGTCTGTCTCGGCCAGGTGCG
CGCCCGGCCGCGCCGCTCGAATCGCCGGATTCGAGCTTCGGCGCGACGTGGAACGGGCCG
GCGCCGCGGAGGGGATGCTCCCCCGTCCCTTCTAGATTCCCGCGGATCTCGCGGGCGTGC
TTGGGGGTGGGGTGAAACGATGCCCAGGTGAGTACATGCCGCGCGCGATCTTCTAGTGGT
TGGTGCGAGTGGTGGACGACCAAGATGATGCCGTCGGGTCCGCCGAACCCGATGGGGCAC
GGGCAGCCAGTGGGCGGCGCTGCCCCGTCGCTACTCCGGACGAGTTCTTCCCTGCTCAGT
GGCGGTGGTCAGCCGGGTATGGGCGGAGGTGGTGGTGGCATGCTTTCTTCACAGTCGCCC
TTCTCTTCCCTTGTCTCCCCACGCACACAGTTTGGTGGCAACGGTCTTCTGGGAGGTGCC
TCTCTGCTGAACCGGCCGCCATTCGGGAATGGTGGCCCTATGCCAGGTCCAGGGTCAATG
CAGGCTGTTGGGATGCAGATGAGTACACTCCAGCAGAGAGCTGGGCTGGATGGTGCCAGC
GATTTCATTAGCGCGGAAGGGTCGGATCCTCTATCATTCCCGTCTTCTTCACAGGTCAAT
TTGGGCAATCAGATGGGATCAGATAATCTGCAGGCGACTTCGCAGCAGCAGCAGCAGCAG
ATGGATGCCATGCAGGATATGCAACAGCAGCTACCAATGTCTTACAACCAGCAACAGTTG
CCACCACAACACTCGCAGCAGCTCCAGCAGCCACAGGCTACAGTCAAGTTAGAGAATGGA
GGAAGCATGATTAGCATCAAACCAGAGCAGCAGATGGCACAACCTGACCAGATGATGCGA
AGTGCTAGTGGTGTGAAACTTGAGCCACAGCAGCTGCAAGCCCAGATGATGAGAAGTTTA
AGTTCAGTCAAGATGGAGCAACAGACTTCTGATTCATCAGCATTCCTGCAGCAGCAGCAA
CAACAACAACATTTGTTGCAGCTGACAAAACAGATTCGAAATTGTCCGGAGCTTGTATCA
ATAGGTGGACCAAATGCAATTGCAAACCCTCAAGCTGCCACAGCTGCTCAACTGACCCTC
TTGCAGCAGCAACGGCTTCTGCATATGCAACAGCAGCAGCAACAACAGATTCTAAAGAAC
TTACCTTTGCAGAGAAACCAGTTGCAGCAACAGCAGCAGCATCAACAGCAGCAGCAGTTA
CTTCGTCAACAGAGTCTAAACATGAGAACTCCAGGAAAGTCGTCTCCTTATGAGCCAGGA
ACCTGTGCAAAGAGATTGACTCATTACATGTATCATCAACAAAACAGACCACAAGATAAC
AACATTGAATACTGGAGAAACTTTGTCAATGAGTATTTTGCTCCAAACGCTAAAAAGAGG
TGGTGTGTCTCGCTTTATGGAAGTGGTCGTCAAACTACTGGAGTTTTCCCTCAGGATGTA
TGGCACTGTGAGATTTGTAATCGGAAACCTGGCCGGGGTTTTGAAACAACAGTTGAGGTA
CTACCGCGATTATGCCAAATTAAATATGCCAGTGGTACACTTGAAGAACTTTTGTACATC
GACATGCCACGTGAGTCCCAGAATACGTCTGGGCAGATTATTTTGGATTACACAAAAGCA
ATCCAAGAAAGTGTCTTTGAGCAATTGCGTGTTGTACGAGAGGGGCATCTAAGGATAGTT
TTTAATCCAGACCTTAAGATTGCATCTTGGGAGTTTTGTGCTAGGCGTCATGAAGAACTT
GTTCCGCGGAGATCTATAATACCGCAGGTTAGTAATCTTGGCGCGGCTGTACAAAAGTAC
CAGGCCGCCACACAAAATTCGACGAGTTTGTCAGCTCAGGACATGCAGAATAATTGCAAC
TCGGCACTGGAGGTTCCTTTAGTAAATGATTTAGGATACACAAAACGATATGTTCGCTGC
CTTCAGATTGCCGAGGTCGTAAACTGTATGAAGGATTTGATTGATCACAGCAGGCAGACT
GGATCTGGACCCATTGATAGCCTGCATAACTTGCCACGGAGGACACCTTCAGGGGCCAGC
ACTCTTCAACCACAGCAGCAGCAAACTGAGGAGAAGCAGGCCATTCCCCAGAGTTCAAAC
CAGAGTGGTCAAAATTCTGCTCCTATGGCTGGTGTGCAGCCTTCTGCCTCTGCCAATGGT
GATGTGACATCAAATGTTACTCTCAGTTGTGCACCTTCTACATCTGCGCCTTCACCATCA
GTTGTTGGGCTCTTGCAAAATTCAATGAATTCTAGACAAGACCATGCAATGAGCAGCAAC
AACGGTGGTCCATATAGTGGAGGCAATGTGGCTATTCCGAAGGTGAACTCTACAAGCTCG
CTGCACTCAAACCCACCTACATCTTTCCCTTCCCCAGCACCGACAACGTCCAATAATAGC
ATGATGCCCGCTCCTCAAAATACAAATCAACTAAGCTCCCCAACGACATCACCAAGCATA
CCTCCGATGCAGCCACCTGCTGCTCGGCCTCAGGAGGCCGAGCCAAGTGACTCGCAAAGC
TCGGTTCAGAAGATCTTGCAAGACCTGATGTCGTCGCAGATGAATGGTGTTGGCCACTCG
GGGAATGACACGAAGACACCGAACGGACTAACCCATGGTGCTAATGGGGTTAACTGCTTA
CTCGGCAATGCTGCCGCGAATAACTCGGGGATAGGAGGAATGGGATTTGGCGCCATGAGC
GGGTTCGGTCATGGGATGAGGACGGCAATGGCGAACAATCCGATGGCGATGGGTGCAAGG
ATGGGAATGAACCACGGTGCACACGACCTATCGCAGCTGGGTCAGCTACAGCACCAGCAG
CAACATCAGCAGCAGCATGACATAGGAAGCCAGCTGCTGGGCGGATTTAGATCAGGGAAC
AGCTTCAATAACATGCAGTATGACTGGAAACCCTCACAATAGAGCGAGCGACCAGAAACC
ATAAGAGT