Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007288_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:2:226875768:226883007:-1 gene:Zm00001d007288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acetolactate synthase small subunit 1 chloroplastic
Sequence	ATGAAGCGTCACACGCTATCAGTTTTTGTTGGTGATGAAAGTGGGATGATCAATCGAATT GCTGGGGTTTTTGCTAGAAGAGGATATAACATCGAGTCATTGGCTGTTGGGTTGAACAAG GATAAAGCATTATTTACAATAGTAGTGTCAGGAACAGACAAAATATTAAACCAGGTCGTA GAGCAACTAAACAAGCTTGTTAATGTCATAAAGGTTGATGATTTATCAATGGAACCACAA GTTGAAAGAGAACTTATGCTTATAAAAGTAAATGCAGAGCGAGAAAAGTTACCTGAGATA ATGGGTTTGGTTCGCATTTTCAAAGCAGAAGTGGTTGATCTTTCAGACTACACACTAACT ATTGAGGTAACTGGAGATCCTGGAAAGATGGTTGCAATACAGAAGACTCTGAGCAAATAT GGGATCAGAGAAATTGCTAGAACTGGCAAGATAGCTTTGCGCCGTGAAAAAATGGGAGAA ACTGCTCCATTTTGGAGGTTCTCTGCAGCTTCTTATCCGGATCTCGAAGTGGCAATACCT TCAAATTTCCAGCAAAACACTGGTGTGAAGGCAATCAATCAGAATCCGGAAGAATCTTCA GGGGGTGATGTTTATCCAGTGGAATCTTATGAAAGCTTCTCATCAACAAGTCAAATTCTG GATGCTCATTGGGGTGTTATGACTGATGGCGATCCAACAGGGTTTTGTTCACATACTCTA TCAATTCTTGTGAATGATGTCCCTGGAGTTCTCAATCTTGTAACAGGTGTATTCTCCAGA AGGGGCTACAATATTCAGAGTCTTGCTGTTGGCCCAGCTGAAAAAGAAGGAACTTCTCGC ATCACTACTGTTGTTCCTGGAACTGATGAATCCATTGCCAAGCTAGTACATCAACTGTAC AAGCTCATTGATGTTTATGAAGTAAATATTAACATTGCAGTTTCCATGATTGTTATAGAA GTCACGCTGAAAGTTTTTTTTGGTTTCTCAGGTTCAGGATTTTACCCACTTACCATTTGC TGCTAG

Peptide Sequence

PEP ID	Zm00001d007288_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:2:226875768:226883007:-1 gene:Zm00001d007288 transcript:Zm00001d007288_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acetolactate synthase small subunit 1 chloroplastic
Sequence	MKRHTLSVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTDKILNQVV EQLNKLVNVIKVDDLSMEPQVERELMLIKVNAEREKLPEIMGLVRIFKAEVVDLSDYTLT IEVTGDPGKMVAIQKTLSKYGIREIARTGKIALRREKMGETAPFWRFSAASYPDLEVAIP SNFQQNTGVKAINQNPEESSGGDVYPVESYESFSSTSQILDAHWGVMTDGDPTGFCSHTL SILVNDVPGVLNLVTGVFSRRGYNIQSLAVGPAEKEGTSRITTVVPGTDESIAKLVHQLY KLIDVYEVNINIAVSMIVIEVTLKVFFGFSGSGFYPLTICC

Transcript Sequence

Transcript ID	Zm00001d007288_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:226875768:226883007:-1 gene:Zm00001d007288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acetolactate synthase small subunit 1 chloroplastic
Sequence	GGAGCCGCCGGTCCTAGCCTGGAACCAACCACCTCATCCGTCTGCGTGTGCGCGCTGACT CCCCCCTCTCCCAAAACCCCCACACTCCCCCTTCGGCATCTCCGATATCCGTTCAGCAAT GACCATGAACGCTGCGATCGCCTCCCGACTCGGCCTCGCCGTCTCCAGGTGTGGGGCTGG GTCCCGAGTGGACAGCCGGCCGCTGACGCCGGCAGTGGGTTTCACGGCGGGGCCGAGGGC GCGCTCAGTAGCCGTCACCGCCGCCTCCTCTTCTCCGGCGACCGGTGGCGTGACGCCGGT GCCACCCCGCTCGAATCGCTCGATATAAAAGGAGGGATGGAGGAACTCCCTGAAGAACAA GATACAACAGATCCACCACATACATGACGTAAGGGTTATGAAGCGTCACACGCTATCAGT TTTTGTTGGTGATGAAAGTGGGATGATCAATCGAATTGCTGGGGTTTTTGCTAGAAGAGG ATATAACATCGAGTCATTGGCTGTTGGGTTGAACAAGGATAAAGCATTATTTACAATAGT AGTGTCAGGAACAGACAAAATATTAAACCAGGTCGTAGAGCAACTAAACAAGCTTGTTAA TGTCATAAAGGTTGATGATTTATCAATGGAACCACAAGTTGAAAGAGAACTTATGCTTAT AAAAGTAAATGCAGAGCGAGAAAAGTTACCTGAGATAATGGGTTTGGTTCGCATTTTCAA AGCAGAAGTGGTTGATCTTTCAGACTACACACTAACTATTGAGGTAACTGGAGATCCTGG AAAGATGGTTGCAATACAGAAGACTCTGAGCAAATATGGGATCAGAGAAATTGCTAGAAC TGGCAAGATAGCTTTGCGCCGTGAAAAAATGGGAGAAACTGCTCCATTTTGGAGGTTCTC TGCAGCTTCTTATCCGGATCTCGAAGTGGCAATACCTTCAAATTTCCAGCAAAACACTGG TGTGAAGGCAATCAATCAGAATCCGGAAGAATCTTCAGGGGGTGATGTTTATCCAGTGGA ATCTTATGAAAGCTTCTCATCAACAAGTCAAATTCTGGATGCTCATTGGGGTGTTATGAC TGATGGCGATCCAACAGGGTTTTGTTCACATACTCTATCAATTCTTGTGAATGATGTCCC TGGAGTTCTCAATCTTGTAACAGGTGTATTCTCCAGAAGGGGCTACAATATTCAGAGTCT TGCTGTTGGCCCAGCTGAAAAAGAAGGAACTTCTCGCATCACTACTGTTGTTCCTGGAAC TGATGAATCCATTGCCAAGCTAGTACATCAACTGTACAAGCTCATTGATGTTTATGAAGT AAATATTAACATTGCAGTTTCCATGATTGTTATAGAAGTCACGCTGAAAGTTTTTTTTGG TTTCTCAGGTTCAGGATTTTACCCACTTACCATTTGCTGCTAGAGAGTTAATGATCATAA AGGTCGCGGCAAATGCTACAGCTCGAAGGGATGTCTTAGATATTGCTCAGATTTTTGAGG CACAGAAAGTTGACATATCAGACCACACAATTACACTACTGGTAGTTATAATTGAAAGAA TGTTTACTTGCACATACCTCATGTAGCACTCTAATGTCCTTCGAAAATTATGATAATTTA ATCTACTTGTATAAGATCCTTGGGACAGTAGAACACCATATGGTTTATCTTTGACTCCAT CATTTAGTTAAGTTATGATCCTACCATTAACTGACATAGTATATTAATGTTAAAAGGTAA ATAAGGTCAGCTACTGAATTTTTTTTAGCAACTGTCCATTGTAGTTGTAGAAGACTGATT GAAAATTTTTATATATAAAAAAATTTGGCTCGACCAATGGTTTTCCAGTTTGTTTTGGAT TAATATGCATTCATACTTGTACCAATTTCTTTAGAATCAATAATGTTTCCTTGGTGCCAT GCTTAGTGAGCAATAACCTTGTTGGCATATGCAGCTCACCGGAGACATTGACAGAATGGT TAGATTGCAAAAGATGCTAGAGCAGTATGGCATCTGTGAGGTTGCACGGACAGGCCGGAT TGCTCTGCTCCGAGAGTCTGGAGTTGACTCCAAGTACCTCCGCGGGTTTTCCCTCCCGCT GTAATTCTCCATTTCCAGACATTACACTGCGCGATTTCAGGTCGCCACGGTCATTTTGAC TTCTGAGAATGGAGCTGGAGGAATCATTCAAAAATCCAAGGGTGAGAACTGTAGAAATAA TAGCTGTTAAGTTTCTTGCTTCTGCAAGTATCACGCAGCACATGGGGAGAGATGAAGTAT CATACACAACAATATGTCTGCAGTCAGAAACGATCGATGAGGGGTCCAATATTTTTTTCA CTACACATGTTGTATACGTACACTGGTAGTATCCTAGTTGAAGGAAACGCAATATATATA TATTC