Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007213_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:2:224810259:224820340:1 gene:Zm00001d007213 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-alanine--D-alanine ligase family
Sequence	ATGCTGCTCTCGCGTCCCCAAACCCTGCCCCTGCCCCGGGCCCGGCTCTCTTCCCCGACC CTTCGCCACCTCCGCGCCCTCGCCGCGCCGCTCCGCGCGCTCGTCTCGTCCCCGCCACTA GGGTTCACGTCCGCGGCGCGAGGCCCCGCTCCGCTCCGCGCGGCGGTGTCCGAGTCCGAT CGCGAGCAGCGGGAGGCTGGGGTGGAGGCGGGGGAGCAGGGGAGGCCGCTCCGCGTCGGC CTCGTCTGCGGCGGGCCCTCCGGCGAGAGGGGCGTCTCCCTCAACTCCGCGCGCTCGGTG CTGGATCACATCCAGGGAGAGGATTTGGTCGTCTGCTGCTACTACATTGACTGTGCTATG AAGGCCTTCGCGATATCTCCTGCGCAGCTATATTCCAACACACCTTCGGATTTTGACTTC AAACTTGAAAGTTTAGCCCAAGAATTTGATTCCCTATCTGACTTCGCGGAGCATCTCGCC ACAAATGTTGACATTGTCTTCCCAGTGATCCATGGGAAATTTGGTGAAGATGGAGGCATT CAGGAGCTTTTGGAGAAAGCAAATGTTCCATTTGTTGGGACACCCTCTAAGGAATGCCAG CGTGCTTTTGACAAGCATAATGCGTCGCTCGAGCTCAACGCACAAGGTTTCTTAACAGTG CCCAACTTTCTTGTGGAGAAGGACAAGTTGGCTAAGCCGGAGTTAGAGGCATGGTTCCAA ACCGTCAATCTGAACAAAGAAAATGGCAAAACGATTGTCAAACCTACAAGGGCTGGGTCA AGCATTGGCGTAGTTGTTGCTTATGGTGTGAATGATGCTGCCCAGAAAGCTGAGGAAATT ATTTCAGAGGGAATTGATGATAAAGTTATCATAGAGGTTTTCATTGAAGGGGGCACTGAG TTTACAGCCATCGTGGTTGATGTTGGGATTGCTAACAACAGTGAGCCTGTTGTTCTGCTT CCAACAGAAGTTGAGCTTCAGTACTCCAACAATAGTGATACCAAGGAGGACACAATATTT AACTACCGCAAGAAGTACCTTCCAAGTCGACAGATAAGTGGGATGGAGCAAACCAGCTTT TTGTTCCAACAAGCTTCAGCGGTTGGGTTCTCACACTCTCGAATCCTTCGTACAGTTGTT CAGCATGCTTGCTCGCGATTCCCTTCTCTTCTTCCATGCAATAATGCTTGGACCGCTTTG TCCAGAAAACTACAACCATCAAAACAAGTAGAAGCAATCCACAAAGGAACATCAAGACAG AAGGTTTTTGTGATCTTCGGAGGGGACACTTCAGAACGGCAAGTATCACTTATGAGTGGT ACCAATGTATGGCTTAATCTTCAAGGTTTTGATGATCTTGACGTGACACCGTGTTTGCTT GCACCTGCACATGGATATTTCTCCTCACATGATCAAGATTTCAGTGACAGTTCAAGAGAA GTTTGGACGTTGCCATATTCATTAGTGTTACGACATACCACTGAAGAAGTTCATGCTGCA TGTGTTGAGGCAACTGAGCCAGAACGAGTTGAAATAACAAAACGTTTGCGTGATCAAGTA ATGAATGAACTTGGGTCAGCATTGAGCAAACATGATTGGTTTGCGGGCTTTGACATAGCT TATGAACAACCTATCAAATACTCTCTGCAACAGTGGATCGACCATGTAAAAGAAACTGAA GCTGTAGTCTTTATAGCAGTGCATGGTGGCATTGGCGAGGATGGTACCATTCAGACATTG TTGGAATCTGCAGGAGTTCCTTACACAGGACCAGGACCAATAGCGTCTAGAACATGCATT GACAAAGTTGCAAGTTCACTTGCTGTTGACCATCTTGCTAGTTATGGAATCCGTATCATT CCAAAGGATGTAAGAGCAACAGAAGAAGTACTGAACTCATCTCTTGTTGATATCTGGAAT GAACTTAAAGCAAAACTAGAAACAGAAACAGTATGTGTGAAACCAGCTCGTGACGGGTGC TCGACTGGTGTAGCAAGATTGTGCTGTCCAAAGGACCTAGAAGTCTATACAAATGCATTG AGGAGGAAGTTTCAGCATCTGCCTGCTAATTGCCTGTCCAGGGCACATGGTGTAATTGAG ATGCCAGTCCCTTCTCCAGAGTCACTAATATTTGAGCCTTTTATTGAAACCGATGAAATT ATCATTGCAAATAAATTAGAGGATGGTAGTGCCCGCCATCTTGTATGGAAAGGTGAAAAT GACTGGCTTGAAATAACCGTTGGTGTAGTTGGCAAACGTGGAGAAATGCACTCATTAAAT CCAAGTATCACAGTGAAAGAAAGTGGTGATATTTTATCTCTTGAGGAGAAATTTCAAGGT GGCACTGGAATCAACTTGACACCACCTCCTGCAACAATTATGGGCGAGGATGCTCTGCAG AGGTGCAAGAAGAGTATCGAGACCATGGCAAACGCTCTAGGTTTGGAAGGCTTCTCACGC ATTGATGCATTTGTCAACGTGCGAAGCGGGGAGGTGCTGCTGATTGAAGTCAACACTGTA CCTGGGATGACTCCATCCACCGTGCTGATCCACCAAGCACTCGCAGAGGAACCGCCCGTG TACCCCCACAGGTTTTTCCGCACTCTTCTGGATTTGGTGTTTGCAAGGGCAAAATAG

Peptide Sequence

PEP ID	Zm00001d007213_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:2:224810259:224820340:1 gene:Zm00001d007213 transcript:Zm00001d007213_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-alanine--D-alanine ligase family
Sequence	MLLSRPQTLPLPRARLSSPTLRHLRALAAPLRALVSSPPLGFTSAARGPAPLRAAVSESD REQREAGVEAGEQGRPLRVGLVCGGPSGERGVSLNSARSVLDHIQGEDLVVCCYYIDCAM KAFAISPAQLYSNTPSDFDFKLESLAQEFDSLSDFAEHLATNVDIVFPVIHGKFGEDGGI QELLEKANVPFVGTPSKECQRAFDKHNASLELNAQGFLTVPNFLVEKDKLAKPELEAWFQ TVNLNKENGKTIVKPTRAGSSIGVVVAYGVNDAAQKAEEIISEGIDDKVIIEVFIEGGTE FTAIVVDVGIANNSEPVVLLPTEVELQYSNNSDTKEDTIFNYRKKYLPSRQISGMEQTSF LFQQASAVGFSHSRILRTVVQHACSRFPSLLPCNNAWTALSRKLQPSKQVEAIHKGTSRQ KVFVIFGGDTSERQVSLMSGTNVWLNLQGFDDLDVTPCLLAPAHGYFSSHDQDFSDSSRE VWTLPYSLVLRHTTEEVHAACVEATEPERVEITKRLRDQVMNELGSALSKHDWFAGFDIA YEQPIKYSLQQWIDHVKETEAVVFIAVHGGIGEDGTIQTLLESAGVPYTGPGPIASRTCI DKVASSLAVDHLASYGIRIIPKDVRATEEVLNSSLVDIWNELKAKLETETVCVKPARDGC STGVARLCCPKDLEVYTNALRRKFQHLPANCLSRAHGVIEMPVPSPESLIFEPFIETDEI IIANKLEDGSARHLVWKGENDWLEITVGVVGKRGEMHSLNPSITVKESGDILSLEEKFQG GTGINLTPPPATIMGEDALQRCKKSIETMANALGLEGFSRIDAFVNVRSGEVLLIEVNTV PGMTPSTVLIHQALAEEPPVYPHRFFRTLLDLVFARAK

Transcript Sequence

Transcript ID	Zm00001d007213_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:224810259:224820340:1 gene:Zm00001d007213 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-alanine--D-alanine ligase family
Sequence	GCACTTCACATCGCTCTCCCGCTTTCCCACTCCCGCGTCGGCTCCCAGCACCAGCTACTC CTCCACGGTGCACGGCCGCATCAGCACGATCGCTGCCTAGCCTGCCTGCCTGCCCTGCTC CCCCACCATGCTGCTCTCGCGTCCCCAAACCCTGCCCCTGCCCCGGGCCCGGCTCTCTTC CCCGACCCTTCGCCACCTCCGCGCCCTCGCCGCGCCGCTCCGCGCGCTCGTCTCGTCCCC GCCACTAGGGTTCACGTCCGCGGCGCGAGGCCCCGCTCCGCTCCGCGCGGCGGTGTCCGA GTCCGATCGCGAGCAGCGGGAGGCTGGGGTGGAGGCGGGGGAGCAGGGGAGGCCGCTCCG CGTCGGCCTCGTCTGCGGCGGGCCCTCCGGCGAGAGGGGCGTCTCCCTCAACTCCGCGCG CTCGGTGCTGGATCACATCCAGGGAGAGGATTTGGTCGTCTGCTGCTACTACATTGACTG TGCTATGAAGGCCTTCGCGATATCTCCTGCGCAGCTATATTCCAACACACCTTCGGATTT TGACTTCAAACTTGAAAGTTTAGCCCAAGAATTTGATTCCCTATCTGACTTCGCGGAGCA TCTCGCCACAAATGTTGACATTGTCTTCCCAGTGATCCATGGGAAATTTGGTGAAGATGG AGGCATTCAGGAGCTTTTGGAGAAAGCAAATGTTCCATTTGTTGGGACACCCTCTAAGGA ATGCCAGCGTGCTTTTGACAAGCATAATGCGTCGCTCGAGCTCAACGCACAAGGTTTCTT AACAGTGCCCAACTTTCTTGTGGAGAAGGACAAGTTGGCTAAGCCGGAGTTAGAGGCATG GTTCCAAACCGTCAATCTGAACAAAGAAAATGGCAAAACGATTGTCAAACCTACAAGGGC TGGGTCAAGCATTGGCGTAGTTGTTGCTTATGGTGTGAATGATGCTGCCCAGAAAGCTGA GGAAATTATTTCAGAGGGAATTGATGATAAAGTTATCATAGAGGTTTTCATTGAAGGGGG CACTGAGTTTACAGCCATCGTGGTTGATGTTGGGATTGCTAACAACAGTGAGCCTGTTGT TCTGCTTCCAACAGAAGTTGAGCTTCAGTACTCCAACAATAGTGATACCAAGGAGGACAC AATATTTAACTACCGCAAGAAGTACCTTCCAAGTCGACAGATAAGTGGGATGGAGCAAAC CAGCTTTTTGTTCCAACAAGCTTCAGCGGTTGGGTTCTCACACTCTCGAATCCTTCGTAC AGTTGTTCAGCATGCTTGCTCGCGATTCCCTTCTCTTCTTCCATGCAATAATGCTTGGAC CGCTTTGTCCAGAAAACTACAACCATCAAAACAAGTAGAAGCAATCCACAAAGGAACATC AAGACAGAAGGTTTTTGTGATCTTCGGAGGGGACACTTCAGAACGGCAAGTATCACTTAT GAGTGGTACCAATGTATGGCTTAATCTTCAAGGTTTTGATGATCTTGACGTGACACCGTG TTTGCTTGCACCTGCACATGGATATTTCTCCTCACATGATCAAGATTTCAGTGACAGTTC AAGAGAAGTTTGGACGTTGCCATATTCATTAGTGTTACGACATACCACTGAAGAAGTTCA TGCTGCATGTGTTGAGGCAACTGAGCCAGAACGAGTTGAAATAACAAAACGTTTGCGTGA TCAAGTAATGAATGAACTTGGGTCAGCATTGAGCAAACATGATTGGTTTGCGGGCTTTGA CATAGCTTATGAACAACCTATCAAATACTCTCTGCAACAGTGGATCGACCATGTAAAAGA AACTGAAGCTGTAGTCTTTATAGCAGTGCATGGTGGCATTGGCGAGGATGGTACCATTCA GACATTGTTGGAATCTGCAGGAGTTCCTTACACAGGACCAGGACCAATAGCGTCTAGAAC ATGCATTGACAAAGTTGCAAGTTCACTTGCTGTTGACCATCTTGCTAGTTATGGAATCCG TATCATTCCAAAGGATGTAAGAGCAACAGAAGAAGTACTGAACTCATCTCTTGTTGATAT CTGGAATGAACTTAAAGCAAAACTAGAAACAGAAACAGTATGTGTGAAACCAGCTCGTGA CGGGTGCTCGACTGGTGTAGCAAGATTGTGCTGTCCAAAGGACCTAGAAGTCTATACAAA TGCATTGAGGAGGAAGTTTCAGCATCTGCCTGCTAATTGCCTGTCCAGGGCACATGGTGT AATTGAGATGCCAGTCCCTTCTCCAGAGTCACTAATATTTGAGCCTTTTATTGAAACCGA TGAAATTATCATTGCAAATAAATTAGAGGATGGTAGTGCCCGCCATCTTGTATGGAAAGG TGAAAATGACTGGCTTGAAATAACCGTTGGTGTAGTTGGCAAACGTGGAGAAATGCACTC ATTAAATCCAAGTATCACAGTGAAAGAAAGTGGTGATATTTTATCTCTTGAGGAGAAATT TCAAGGTGGCACTGGAATCAACTTGACACCACCTCCTGCAACAATTATGGGCGAGGATGC TCTGCAGAGGTGCAAGAAGAGTATCGAGACCATGGCAAACGCTCTAGGTTTGGAAGGCTT CTCACGCATTGATGCATTTGTCAACGTGCGAAGCGGGGAGGTGCTGCTGATTGAAGTCAA CACTGTACCTGGGATGACTCCATCCACCGTGCTGATCCACCAAGCACTCGCAGAGGAACC GCCCGTGTACCCCCACAGGTTTTTCCGCACTCTTCTGGATTTGGTGTTTGCAAGGGCAAA ATAGCTATCTCACATTTATTTTTCTTTTTACGCGTTGCGCGGTCGTCGTGCACATCAGAG CAGAGCAGAAGCAACCCTCCACGGACGTCAAGTCAAACCAACACGTCCGGGCCACAATAT GGAAAGCTAGCTATACAAGTATCGTGGAATATAAACTCTCAAACTTACCAAGTTTTCATC ACATCATTAATATAGAGGTTTAGTTCTCGACATTGAAATCAGCAGTAAAAGGATTGGGTG GACTGAATGATGCAGCAGCTTATCATCAGTGTGTACCACATCAAATCTGTCATTGAGTTC TTGACTCTTAGGGCATCTATAGCCTACATAAATAACCAGTAGCATGTTCGGTTGCAAAGT GTTTGAAAATTGAATAGAAAGATATTT