Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007201_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:224491943:224492485:1 gene:Zm00001d007201 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RNF13
Sequence

ATGGCGAGCCTGCAAGCAGCCCTGCTCCTTCTCCCGGCGTTCTCCGTCGTGGCTGTGGCG
GCACGGTGGGTGTGCCGCGCGCTGGCGCGCTCCCATTTGGCGTGCCTCCCGTCCGGCAGC
CCGTCGTTCCGGTACCTGGTCTCCTCCTCGCCGTCGTCGTCGTCCGTGGTGGACAAGGGC
GGCGGCGAGCTGCCGGTGGCGCTTTATTCCCGGAGGACGAAGCGCCGCCGCTGCGTTGGC
GAGGAGGAGGAGGAGGAACGGTGCGTGTTCTGCCTGAGCAGCATCGAGGAGGGGTCGGAG
GTGAGGGAGCTCCGGTGCCGGCACCTCTTCCACCGCGCGTGCCTGGACCGCTGGGTCCGG
GCGCGGCCGGCGGCGACGTGCCCGCTCTGCCGCGGGCGGCTCCTGACGTCGCTTCCGTGG
GAGGTGGCGGGGTACTACCACGACGAAGAGGAAGAGGAGGAGGTGGAGATGGAGGAGGAG
TCGGACATGATGCTGTTCATGGCGTGCGTGCACAGCCGCAGCAGCTGGCTGTGGCCGTCG
TGA

Peptide Sequence

PEP ID

Zm00001d007201_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:224491943:224492485:1 gene:Zm00001d007201 transcript:Zm00001d007201_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RNF13
Sequence

MASLQAALLLLPAFSVVAVAARWVCRALARSHLACLPSGSPSFRYLVSSSPSSSSVVDKG
GGELPVALYSRRTKRRRCVGEEEEEERCVFCLSSIEEGSEVRELRCRHLFHRACLDRWVR
ARPAATCPLCRGRLLTSLPWEVAGYYHDEEEEEEVEMEEESDMMLFMACVHSRSSWLWPS

Transcript Sequence

Transcript ID

Zm00001d007201_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:224491943:224492485:1 gene:Zm00001d007201 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RNF13
Sequence

ATGGCGAGCCTGCAAGCAGCCCTGCTCCTTCTCCCGGCGTTCTCCGTCGTGGCTGTGGCG
GCACGGTGGGTGTGCCGCGCGCTGGCGCGCTCCCATTTGGCGTGCCTCCCGTCCGGCAGC
CCGTCGTTCCGGTACCTGGTCTCCTCCTCGCCGTCGTCGTCGTCCGTGGTGGACAAGGGC
GGCGGCGAGCTGCCGGTGGCGCTTTATTCCCGGAGGACGAAGCGCCGCCGCTGCGTTGGC
GAGGAGGAGGAGGAGGAACGGTGCGTGTTCTGCCTGAGCAGCATCGAGGAGGGGTCGGAG
GTGAGGGAGCTCCGGTGCCGGCACCTCTTCCACCGCGCGTGCCTGGACCGCTGGGTCCGG
GCGCGGCCGGCGGCGACGTGCCCGCTCTGCCGCGGGCGGCTCCTGACGTCGCTTCCGTGG
GAGGTGGCGGGGTACTACCACGACGAAGAGGAAGAGGAGGAGGTGGAGATGGAGGAGGAG
TCGGACATGATGCTGTTCATGGCGTGCGTGCACAGCCGCAGCAGCTGGCTGTGGCCGTCG
TGA