Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007187_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:2:224121040:224123245:1 gene:Zm00001d007187 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGTTCGGGCACCACCACCACCACGGCCACGGCGGGCACCACCAGGCCCCGCCGCCGCAC GAGCAGACGCTGTTCAGGATCTTCTGCCGCGCCGACGAGGCGTACTGCCTCACCCACTGG TACAAGGACATGAGGCACAGCACGAAGGTGAAGGACGCGGAGGGCCAGCCGGCGTTCGCG CTCATCAACAGGGCCACCGGCCTCGCCATCAAGCACTCGCTCGGCCAGTCCCATCCCGTG AAGCTGGTGCCCTACAACGCGGAGTACCTGGACGAGTCGGTGCTGTGGACGGAGAGCCAC GACGTGGGCAAGGGCTTCCGCTGCATCCGCATGGTCAACAACATCCACCTCAACTTCGAC GCCTTCCACGGCGACAAGGACCACGGCGGCGTGCACGACGGCACCACCGTGGTGCTCTGG GAGTGGTGCAAGGGCCCCAACCAGAGCTGGAAGGTGCTGCCCTGGGGGGACGAGGCCTAC GCGCCGCGCCCGTACGCTCCTCCTCCGCCTGCCCAGGTGGAACCAGGCTACGGCGGGTAC CGTCCCCCGGCTGCAGGGGGCTACGCGCCGCCGCCTCCGCCTGCCCAGGTGGAACCAGGC TACGGCGGGTACCCTCCTCCACCAGCTGCAGGGGGCTACGCGCCTCCTCCTCCGCCTGCC CAGGTGGAACCAGGCTACGGCGGGTACCCTCCTCCCCCAGCTGCAGGGGGCTACGCGCCG CCGCCTCCGCCTGTGCCTGTGCAGGAGCCTGGCTACGGCGGGTACCGTCCTCCATCTGCT GGGGGCTACCCGGCGGGGTACGGGTACAGCAACCTGCCTCGCGCTCTGGCGTCTGAACAG ACCGTCCGCGTCTACTGCAAGGCCGGCGAAGGGTACAGCCTCACCGTCAGGAACGGCACC GTGTGCCTGGCGCCAACCAACCCCAGGGACGAGTTCCAGCACTGGGTGAAGGACATGAGG CACAGCACTAGCATCAAGGACGAGGAAGGGTACCCAGCGTTCGCGCTGGTGAACAAGGTC ACCGGCGAAGCCATCAAGCACTCGCTGGGACAGAGCCACCCGGTACGCCTTGTGCCCTAC AACCCCGAGTACGTTGACGAGTCGGTGCTGTGGACGGAGAGCCGCGACGTCGGGCACGGC TTCCGCTGCGTGCGCATGGTGAACAACATCTACCTCAACATGGACGCCTTCCACGGCGAC AAGGACCACGGCGGCGTCCACGACGGCACCACCGTCGTCCTCTGGGAGTGGGCCAAGGGC GACAACCAGCGCTGGAAGATCCTGCCCTGGTGA

Peptide Sequence

PEP ID	Zm00001d007187_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:2:224121040:224123245:1 gene:Zm00001d007187 transcript:Zm00001d007187_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MFGHHHHHGHGGHHQAPPPHEQTLFRIFCRADEAYCLTHWYKDMRHSTKVKDAEGQPAFA LINRATGLAIKHSLGQSHPVKLVPYNAEYLDESVLWTESHDVGKGFRCIRMVNNIHLNFD AFHGDKDHGGVHDGTTVVLWEWCKGPNQSWKVLPWGDEAYAPRPYAPPPPAQVEPGYGGY RPPAAGGYAPPPPPAQVEPGYGGYPPPPAAGGYAPPPPPAQVEPGYGGYPPPPAAGGYAP PPPPVPVQEPGYGGYRPPSAGGYPAGYGYSNLPRALASEQTVRVYCKAGEGYSLTVRNGT VCLAPTNPRDEFQHWVKDMRHSTSIKDEEGYPAFALVNKVTGEAIKHSLGQSHPVRLVPY NPEYVDESVLWTESRDVGHGFRCVRMVNNIYLNMDAFHGDKDHGGVHDGTTVVLWEWAKG DNQRWKILPW

Transcript Sequence

Transcript ID	Zm00001d007187_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:224121040:224123245:1 gene:Zm00001d007187 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGTTCGGGCACCACCACCACCACGGCCACGGCGGGCACCACCAGGCCCCGCCGCCGCAC GAGCAGACGCTGTTCAGGATCTTCTGCCGCGCCGACGAGGCGTACTGCCTCACCCACTGG TACAAGGACATGAGGCACAGCACGAAGGTGAAGGACGCGGAGGGCCAGCCGGCGTTCGCG CTCATCAACAGGGCCACCGGCCTCGCCATCAAGCACTCGCTCGGCCAGTCCCATCCCGTG AAGCTGGTGCCCTACAACGCGGAGTACCTGGACGAGTCGGTGCTGTGGACGGAGAGCCAC GACGTGGGCAAGGGCTTCCGCTGCATCCGCATGGTCAACAACATCCACCTCAACTTCGAC GCCTTCCACGGCGACAAGGACCACGGCGGCGTGCACGACGGCACCACCGTGGTGCTCTGG GAGTGGTGCAAGGGCCCCAACCAGAGCTGGAAGGTGCTGCCCTGGGGGGACGAGGCCTAC GCGCCGCGCCCGTACGCTCCTCCTCCGCCTGCCCAGGTGGAACCAGGCTACGGCGGGTAC CGTCCCCCGGCTGCAGGGGGCTACGCGCCGCCGCCTCCGCCTGCCCAGGTGGAACCAGGC TACGGCGGGTACCCTCCTCCACCAGCTGCAGGGGGCTACGCGCCTCCTCCTCCGCCTGCC CAGGTGGAACCAGGCTACGGCGGGTACCCTCCTCCCCCAGCTGCAGGGGGCTACGCGCCG CCGCCTCCGCCTGTGCCTGTGCAGGAGCCTGGCTACGGCGGGTACCGTCCTCCATCTGCT GGGGGCTACCCGGCGGGGTACGGGTACAGCAACCTGCCTCGCGCTCTGGCGTCTGAACAG ACCGTCCGCGTCTACTGCAAGGCCGGCGAAGGGTACAGCCTCACCGTCAGGAACGGCACC GTGTGCCTGGCGCCAACCAACCCCAGGGACGAGTTCCAGCACTGGGTGAAGGACATGAGG CACAGCACTAGCATCAAGGACGAGGAAGGGTACCCAGCGTTCGCGCTGGTGAACAAGGTC ACCGGCGAAGCCATCAAGCACTCGCTGGGACAGAGCCACCCGGTACGCCTTGTGCCCTAC AACCCCGAGTACGTTGACGAGTCGGTGCTGTGGACGGAGAGCCGCGACGTCGGGCACGGC TTCCGCTGCGTGCGCATGGTGAACAACATCTACCTCAACATGGACGCCTTCCACGGCGAC AAGGACCACGGCGGCGTCCACGACGGCACCACCGTCGTCCTCTGGGAGTGGGCCAAGGGC GACAACCAGCGCTGGAAGATCCTGCCCTGGTGAACGTGAACAGAGACGAGCTAGATGAAT CCAAGGAACCTTACCTAGCTGCTGCCGCCGCCGCCTAATTCGTCCTCCTCCGCTCTAGCT GTTATCTGTCTGTGTCTTCGCGTCCTCGGTTCCTGAATGGACGAATAATATATAGCATGC ATGTACGGCTAGCGACCATGTCTGAATGACATCTTCGTTGCTGCTGCTGCTGCTACTGCT ACCTGTCCGTTTGGTGTTCTAAAAGACTCTGATGAGTGGTTCTGAATGTCTGCATTTCAA GTTTGCTGTGTGATGTTAATGTACCGTGCGTACCAGAGCTGCTGCTCCTCCTAAAATCTT TATCTACCTTTGTTTTGATTTTTGCCTGCTTATGGTTATGGCAACACTGCCACAACAATG GCCTTTTTTATTTCAAACTTTCTATAAAATAAATATATAAAAAAATAACTTTGTGC