Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007183_T027
CDS Infomation	cds chromosome:B73_RefGen_v4:2:224010274:224013554:1 gene:Zm00001d007183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 33A
Sequence	ATGGTGGTCAAGCTATTATCAGCTTCTTTACCCTCAGATTCCTCAACTTCAACTCCTGGG AGCATGAGCCACTACCTTGCTCATATGTCTACGTTGAACGAAATCTTACTCGGTGTGTCT TATGGTGATGTCATCCACATTCTTTCGTTGTATGGAATGGTTCCAGATGTTGCCGTGGCT TTAATGCCACTATGTGAGGCTTTTGGGTCAATAGCACCGCCACCTAATCACAAGTCTACC ATTCTTGGTGAAACATCTGTTTATTTGGTCTTCTCCTGTGCATTTCTTTGTCTTCTTCGC TTGTGGAAGTTTTATAGACCCCCTCAAGAGTATTGTCTTACTGGTCGTGGAGGCTCAGTA AAGCTGGAACTGACTCTGGACTATCTGTTGTTGATGCACAATAATCGCATTTTCTCAAAT TCGTCTGCCCCTAATAGGGATTCTTACAACAGTATGGGCTCAGTCAATGAGGTCTCTGCT CAGCCGATTTATATTGATTCTTTCCCCAAGCTAAGTGCTTGGTATTTCCAGAATCAAGCT TGCATCGCCTCTACACTTTCTGGTCTTTGCAACAAAAACCCTGTCCATCAAGTTGCGAAC AAAATTTTGAATATGATTTGCCGAAAAATGAATAAAGGTGGAGTATCATCTAGTAATCTT TCATCTACTTCTAGTAGTAGCGTTAGTGGTTCTTCTGTAAGTGCATCGGATGATTCTTAC CAAAGGCCTGCTGTTCCTGCTTGGGAATTTTTAGAAGCTGTTCCTTTTGTACTTGAAGCT GTTCTGACAGCATGTGCTCATGGGCGGCTTTCCAGCCGAGACTTGACTACAAGCTTAAGG GATCTTGTGGACTTTTTGCCTGCTTCTCTTGCTGCAATTGTAAGCTACTTCTCAGCAGAA ATTACACGGGGAATCTGGAAACCTGTTCCAATGAATGGAACTGAATGGCCCAGTCCTGGT GCTTCTCTTCATTCCATTGAAGCTGAAGTAAAGGAAATTCTTGCATCTGCTGGTGTTCAG ATTAACAGCTGCTATCCACGTGGTGTGCCGCCAATGCTTCCTTTGCCTATGGCTGCACTT GTCAGCTTGACAATTACATTTAAGCTAGATAGGAGTTTGGAGTACATTCAAGGGGTCATT GGACATGCACTAGAGAACTGCGCAGGGGGAAGTTCCTGGCCAAGCATGCCCATTATCGGG GCATTGTGGACACAGAAAGTGCGAAGATGGCATGACTTCATTGTCCTCTCTTGTATGCGT TCTCCATTTGGCAGAGACAAAGATGCAGTTGCGCAGCTCATCCGAAGCTGCTTTTCGTCC TTTCTGCAGTCATCATCCAGTGGTTCTGACATAATCGCAAACCGTGGAGTTGGGGCTTTA TTAGGGGACTCAATCACGGATCAAGGTCTTAGGCTCCCAATGGCACCTGGTTTCGTCTAC CTGAGAACATGTCGAACTTTCCATGACACATACTTCGTTAGTGAAGTGATCCTCAAGCAA GTGATTGAATGGGCTCACAAACTTGCAAATGGATGGTCTTTCAATGGGCCTCCGCAGTTG AAATCAGGCCGGACACCACTATCTTGTGCAGCATCTATGGCGCATCAGGTCGCGATGCTT GGTGGTGGTCTCCTATGCATAGCAGGTGGACCACTTGTGGTCCAGGTGTTGTATGAAGAC ACACTACCGACACTGCTGCTGTCAGCCAGAGAACAGAGTTTGAAAGACCCTGGGCCAGTT TCTAGCACACTCCAAGGTTACGCCATGGCCAACATGCTCTTTTACTGTGGTAGCCTACTT TGGGGAGCGGACAGGAGTTCTCCTGTCATGAAATTGTCTTTCCTCTCGAGGCGGCCACGG GTGGTGAGAAACCACATGGATTTCATAGCTGGTGTACTGGACGGACACATTCTTCTGGGC TGTGACCCGGGTACCTGGAAAGCGTATGTTTCTCAGTTTATGTTCCTGGTGGTGAAGTTT GTTCCATCATGGTTGCCGGACATAAAGCTGGACACGCTAAAGAAGATAGCAGCTGGACTT CGGAGTTGGCATGAACATGACCTTGCTCTATCCCTTCTTGAGCGAGGAGGACCACAAGCA ATCTCTGTTGTAGTCGAGACCTTTCTGTGA

Peptide Sequence

PEP ID	Zm00001d007183_P027
PEP Infomation	pep chromosome:B73_RefGen_v4:2:224010274:224013554:1 gene:Zm00001d007183 transcript:Zm00001d007183_T027 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 33A
Sequence	MVVKLLSASLPSDSSTSTPGSMSHYLAHMSTLNEILLGVSYGDVIHILSLYGMVPDVAVA LMPLCEAFGSIAPPPNHKSTILGETSVYLVFSCAFLCLLRLWKFYRPPQEYCLTGRGGSV KLELTLDYLLLMHNNRIFSNSSAPNRDSYNSMGSVNEVSAQPIYIDSFPKLSAWYFQNQA CIASTLSGLCNKNPVHQVANKILNMICRKMNKGGVSSSNLSSTSSSSVSGSSVSASDDSY QRPAVPAWEFLEAVPFVLEAVLTACAHGRLSSRDLTTSLRDLVDFLPASLAAIVSYFSAE ITRGIWKPVPMNGTEWPSPGASLHSIEAEVKEILASAGVQINSCYPRGVPPMLPLPMAAL VSLTITFKLDRSLEYIQGVIGHALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCMR SPFGRDKDAVAQLIRSCFSSFLQSSSSGSDIIANRGVGALLGDSITDQGLRLPMAPGFVY LRTCRTFHDTYFVSEVILKQVIEWAHKLANGWSFNGPPQLKSGRTPLSCAASMAHQVAML GGGLLCIAGGPLVVQVLYEDTLPTLLLSAREQSLKDPGPVSSTLQGYAMANMLFYCGSLL WGADRSSPVMKLSFLSRRPRVVRNHMDFIAGVLDGHILLGCDPGTWKAYVSQFMFLVVKF VPSWLPDIKLDTLKKIAAGLRSWHEHDLALSLLERGGPQAISVVVETFL

Transcript Sequence

Transcript ID	Zm00001d007183_T027
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:224010274:224013554:1 gene:Zm00001d007183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 33A
Sequence	GGAACATGTGGTCAGTATGGTGGTCAAGCTATTATCAGCTTCTTTACCCTCAGATTCCTC AACTTCAACTCCTGGGAGCATGAGCCACTACCTTGCTCATATGTCTACGTTGAACGAAAT CTTACTCGGTGTGTCTTATGGTGATGTCATCCACATTCTTTCGTTGTATGGAATGGTTCC AGATGTTGCCGTGGCTTTAATGCCACTATGTGAGGCTTTTGGGTCAATAGCACCGCCACC TAATCACAAGTCTACCATTCTTGGTGAAACATCTGTTTATTTGGTCTTCTCCTGTGCATT TCTTTGTCTTCTTCGCTTGTGGAAGTTTTATAGACCCCCTCAAGAGTATTGTCTTACTGG TCGTGGAGGCTCAGTAAAGCTGGAACTGACTCTGGACTATCTGTTGTTGATGCACAATAA TCGCATTTTCTCAAATTCGTCTGCCCCTAATAGGGATTCTTACAACAGTATGGGCTCAGT CAATGAGGTCTCTGCTCAGCCGATTTATATTGATTCTTTCCCCAAGCTAAGTGCTTGGTA TTTCCAGAATCAAGCTTGCATCGCCTCTACACTTTCTGGTCTTTGCAACAAAAACCCTGT CCATCAAGTTGCGAACAAAATTTTGAATATGATTTGCCGAAAAATGAATAAAGGTGGAGT ATCATCTAGTAATCTTTCATCTACTTCTAGTAGTAGCGTTAGTGGTTCTTCTGTAAGTGC ATCGGATGATTCTTACCAAAGGCCTGCTGTTCCTGCTTGGGAATTTTTAGAAGCTGTTCC TTTTGTACTTGAAGCTGTTCTGACAGCATGTGCTCATGGGCGGCTTTCCAGCCGAGACTT GACTACAAGCTTAAGGGATCTTGTGGACTTTTTGCCTGCTTCTCTTGCTGCAATTGTAAG CTACTTCTCAGCAGAAATTACACGGGGAATCTGGAAACCTGTTCCAATGAATGGAACTGA ATGGCCCAGTCCTGGTGCTTCTCTTCATTCCATTGAAGCTGAAGTAAAGGAAATTCTTGC ATCTGCTGGTGTTCAGATTAACAGCTGCTATCCACGTGGTGTGCCGCCAATGCTTCCTTT GCCTATGGCTGCACTTGTCAGCTTGACAATTACATTTAAGCTAGATAGGAGTTTGGAGTA CATTCAAGGGGTCATTGGACATGCACTAGAGAACTGCGCAGGGGGAAGTTCCTGGCCAAG CATGCCCATTATCGGGGCATTGTGGACACAGAAAGTGCGAAGATGGCATGACTTCATTGT CCTCTCTTGTATGCGTTCTCCATTTGGCAGAGACAAAGATGCAGTTGCGCAGCTCATCCG AAGCTGCTTTTCGTCCTTTCTGCAGTCATCATCCAGTGGTTCTGACATAATCGCAAACCG TGGAGTTGGGGCTTTATTAGGGGACTCAATCACGGATCAAGGTCTTAGGCTCCCAATGGC ACCTGGTTTCGTCTACCTGAGAACATGTCGAACTTTCCATGACACATACTTCGTTAGTGA AGTGATCCTCAAGCAAGTGATTGAATGGGCTCACAAACTTGCAAATGGATGGTCTTTCAA TGGGCCTCCGCAGTTGAAATCAGGCCGGACACCACTATCTTGTGCAGCATCTATGGCGCA TCAGGTCGCGATGCTTGGTGGTGGTCTCCTATGCATAGCAGGTGGACCACTTGTGGTCCA GGTGTTGTATGAAGACACACTACCGACACTGCTGCTGTCAGCCAGAGAACAGAGTTTGAA AGACCCTGGGCCAGTTTCTAGCACACTCCAAGGTTACGCCATGGCCAACATGCTCTTTTA CTGTGGTAGCCTACTTTGGGGAGCGGACAGGAGTTCTCCTGTCATGAAATTGTCTTTCCT CTCGAGGCGGCCACGGGTGGTGAGAAACCACATGGATTTCATAGCTGGTGTACTGGACGG ACACATTCTTCTGGGCTGTGACCCGGGTACCTGGAAAGCGTATGTTTCTCAGTTTATGTT CCTGGTGGTGAAGTTTGTTCCATCATGGTTGCCGGACATAAAGCTGGACACGCTAAAGAA GATAGCAGCTGGACTTCGGAGTTGGCATGAACATGACCTTGCTCTATCCCTTCTTGAGCG AGGAGGACCACAAGCAATCTCTGTTGTAGTCGAGACCTTTCTGTGATCCTGCCATTTGGA CATTTTGCCCCCCACCTGACATCGCAGCCGCTGTTAGGGTTTGAAGTCGGTGGTCTGAGG TCTAGCTGAAGTAATCAGGATGACCCTTCCAGAATTCCACTTGAGCAACCAGGATAACTG ATGTTTTTCTCATGTATGGCGAACCCATTTTGTTTTTGTGAATTCAATACGGAAGAACAT TCAACCTACTAGAGTCTAGAGTGTATTGACATCAGCCCTAACATGTAACCTATGGGAATT TCAT