Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007169_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:223717699:223722755:-1 gene:Zm00001d007169 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/OAS1 substrate-binding domain superfamily
Sequence	ATGGCGGCGGCGGCGTACTTGGGCGGCCGCGGCCAGGGAGCAGACGGCGGGTGGTTCGTG CCAGGCGCCGGCGACGGGTGGGCGCCCCCGTGGGGGAGGCGCGGTGGGGGAGGAGCGGCG GCGGCGGCAGCTGCAGCAGCAGGCGAGAGGGAGACGCTGGCGGTGGTGATGGCGAGGAGG GCGCCTCCGCCGTCGGCGATCCGCCGGGACGCGGTGCGCGTTGCGGAGGCGGCCGCCGGC GAGGTGCTGCTGCGCGTCCACCCCACCAGGGAGGCGGAGCGCCGCCGCCAGGACGTCATC GCCTACCTCACACGACTCATCGGATCCTCCCTCGGCTGCGAGGTCTTTGCGTTTGGGTCA GTGCCGCTGAGGACGTATCTCCCCGACGGCGACGTTGATATAACTGTACTGGGGAACACA TGGTTAAACAGTACACTCATTGACGATGTTCGCAGCATGCTCCAGTCGGAACAGGAAAAC TGTGACGCTGAGTTGAAACTAACAGGCCTGCACTTCATCGACGCTGAGGTTAAGCTCATA AAATGTGTGATTGAGAATATTATCGTGGATGTCTCTTTCAACCAGATTGGCGGTGTGTCC ACGTTCTGCTTCCTTGAGCTGGTTGACCGTCAGGTTGGGAAAAACCATTTGTTCAAAAGG AGCATTATGTTAACCAAGGCTTGGTGCTACCACGAAAGTCGCATATTAGGAGCCCATCAT GGACTGATATCTACTTATGCCTTGGAAACACTTGTTCTTTACATATTCAATATGTTCCAC AAGTCTCTGCATGGACCTCTGGAGGTCCTTTATAAGTTTTTGGAATATTTTAGCAAGTTT GACTGGGATCGATATGGCATTAGCTTAAATGGTCCTGTTGATTTGTCATCATTGCCGAGC TTAACTGTGGAACCCACAGAAGTACAAGGTGAGTTATTGCTTGGCAAGGACTTCCATCAA GGCTCTCTGGATAGACTCGTTGTAATTCCAAATGAGTTTGACGGATGCGACACACAATTT CGCCAGAAGTTTTTAAATATAGTCGATCCACTCAAGGCGAATAATAATCTCGGCAGAAGT GTCAGCAAAGCAAACTTTTATCGTATTCGGAGTGCTTTCTCATTCGGAGCACAAAAGCTT GGTCAAATTCTCTTGTTACCATCCGAGTACATTTGTGATGAAATTTACGGATTTTTCTCA AATACACTGAAGAGACACGGAAAGGGTGAAAGACTAGACATTGACGCTAGTAGTGCATTC CAACCCTTGCTTGGTCCCGAGAGTACACTTAGTGAAGATGGATCGATGTTTAAATCTTCT TGCATAAATGAGGGTGAAAACGGAAGTTCATGTCATTCATCAGAACTGCCTGACATGGGC TCGAGTGTGACAGATGTGCATAAGAATTCAGGTAAGTATTTGCCTGGTCTTTTTCAGGAT CTTCCTTGGAATAAAATCTGGTTCATGGAATATGCATCTGATTTGAAAGAAAATCCACAA ACTTCAGCAAGTTCAAGGAGCCACTCATCCTTTTCTCAAGATAATGGTAATGGCAACAGT AAAGAGTGCTTCGAGAATTATGCAGCAGAGGAAGGTTTACACCAGATCAGTAGATTAAAT GTGCCGCAACAGATTTATGCAGGGCATCCATCGCATAGATTGGCTAACTCGACTAGTGCA AATATCTTGGATTTCTCCAGTTCTTGTTTTGTTGATGAGTCAGATTGGACTGCTCCCCTT GCAGGAAAAAAGCTACTCCCACCCTTGTTGCTGTCAAATATGCTGGATCTCTCAGGTGAT CTGGAGTTGTACTTGGGATGCCTTCGCAAAGTTCAGTACCACCTGGAGTCATTGTTTGAT GAACTCCTACAGGCTGTTGAAGAAGCATGTTTTGCTGATGTGCTAGATGAGGATTCCTTC AATATGCCAGACATGATCTTGAAGTTAAAAACTAGCACTAGATCCTCAAGCCTGCCATTA GATTCATCTACTGATAGCGAGAGAAGGAAATTATCTCCTGTGTATTGTTCTCATAGCATA GGAGATGATTCACAACAATCACATGGCGAGGCACAAGTGGATATGTTTTGGCAGCAGAAC GTGCCATTGTCCCCCAATGGATCAACATTTCCTTCATCTCCTTCAACCAATTCAGATAAT TATCCTGTTTCTTGGTTTTGTTTCTCTCCTAAGACGCATGGAACCGGCACATACATTCCC AATGTGAGTTATCAAACATACAGGGAGCGTATCATGCTTGAAAGAGATACCATACGAGCA AGAAAACAAAGACAGAGGTTACCTGGTCGCCGGTATTACTCAGCCGAGCAAGGATTTTCC GGTTCACAAACCGAAGAAGACACCATAGCTCAAAGTGCAACGAACCAATCGCCCAAGAAG CAAAACAGTGTGCAGCAGAGTGGCTATTCAGGCAAGAGCACAGTTCCGGATGCAGATTTC GTTTGTTTCAGGGAGCATGTGGCAACAGAAGGTGGAACCAAACAGCTGGCAGTAGGAAGA GAGACAATGCCTCCATCATCGTCATCAGGGATAGCACTTGCTCAAAACGGCCAAGGAAAT CGTATCTGCGAGCCTTCCTCACCCGCCACAGCAGATTTGTTACATGCGGCAGAAAGTTTG GAGTTTGGATCCTTGGGGCCTTTCTCGTTGGGACTTGTCTCAACTTCAACACAGTTTGAG GAAGCATTCCCAGCGCTCCCCACTAGAAAGAGAGCTGAAGGAGCCGAGAACCACTAA

Peptide Sequence

PEP ID	Zm00001d007169_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:223717699:223722755:-1 gene:Zm00001d007169 transcript:Zm00001d007169_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/OAS1 substrate-binding domain superfamily
Sequence	MAAAAYLGGRGQGADGGWFVPGAGDGWAPPWGRRGGGGAAAAAAAAAGERETLAVVMARR APPPSAIRRDAVRVAEAAAGEVLLRVHPTREAERRRQDVIAYLTRLIGSSLGCEVFAFGS VPLRTYLPDGDVDITVLGNTWLNSTLIDDVRSMLQSEQENCDAELKLTGLHFIDAEVKLI KCVIENIIVDVSFNQIGGVSTFCFLELVDRQVGKNHLFKRSIMLTKAWCYHESRILGAHH GLISTYALETLVLYIFNMFHKSLHGPLEVLYKFLEYFSKFDWDRYGISLNGPVDLSSLPS LTVEPTEVQGELLLGKDFHQGSLDRLVVIPNEFDGCDTQFRQKFLNIVDPLKANNNLGRS VSKANFYRIRSAFSFGAQKLGQILLLPSEYICDEIYGFFSNTLKRHGKGERLDIDASSAF QPLLGPESTLSEDGSMFKSSCINEGENGSSCHSSELPDMGSSVTDVHKNSGKYLPGLFQD LPWNKIWFMEYASDLKENPQTSASSRSHSSFSQDNGNGNSKECFENYAAEEGLHQISRLN VPQQIYAGHPSHRLANSTSANILDFSSSCFVDESDWTAPLAGKKLLPPLLLSNMLDLSGD LELYLGCLRKVQYHLESLFDELLQAVEEACFADVLDEDSFNMPDMILKLKTSTRSSSLPL DSSTDSERRKLSPVYCSHSIGDDSQQSHGEAQVDMFWQQNVPLSPNGSTFPSSPSTNSDN YPVSWFCFSPKTHGTGTYIPNVSYQTYRERIMLERDTIRARKQRQRLPGRRYYSAEQGFS GSQTEEDTIAQSATNQSPKKQNSVQQSGYSGKSTVPDADFVCFREHVATEGGTKQLAVGR ETMPPSSSSGIALAQNGQGNRICEPSSPATADLLHAAESLEFGSLGPFSLGLVSTSTQFE EAFPALPTRKRAEGAENH

Transcript Sequence

Transcript ID	Zm00001d007169_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:223717699:223722755:-1 gene:Zm00001d007169 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP/OAS1 substrate-binding domain superfamily
Sequence	ATGGCGGCGGCGGCGTACTTGGGCGGCCGCGGCCAGGGAGCAGACGGCGGGTGGTTCGTG CCAGGCGCCGGCGACGGGTGGGCGCCCCCGTGGGGGAGGCGCGGTGGGGGAGGAGCGGCG GCGGCGGCAGCTGCAGCAGCAGGCGAGAGGGAGACGCTGGCGGTGGTGATGGCGAGGAGG GCGCCTCCGCCGTCGGCGATCCGCCGGGACGCGGTGCGCGTTGCGGAGGCGGCCGCCGGC GAGGTGCTGCTGCGCGTCCACCCCACCAGGGAGGCGGAGCGCCGCCGCCAGGACGTCATC GCCTACCTCACACGACTCATCGGATCCTCCCTCGGCTGCGAGGTCTTTGCGTTTGGGTCA GTGCCGCTGAGGACGTATCTCCCCGACGGCGACGTTGATATAACTGTACTGGGGAACACA TGGTTAAACAGTACACTCATTGACGATGTTCGCAGCATGCTCCAGTCGGAACAGGAAAAC TGTGACGCTGAGTTGAAACTAACAGGCCTGCACTTCATCGACGCTGAGGTTAAGCTCATA AAATGTGTGATTGAGAATATTATCGTGGATGTCTCTTTCAACCAGATTGGCGGTGTGTCC ACGTTCTGCTTCCTTGAGCTGGTTGACCGTCAGGTTGGGAAAAACCATTTGTTCAAAAGG AGCATTATGTTAACCAAGGCTTGGTGCTACCACGAAAGTCGCATATTAGGAGCCCATCAT GGACTGATATCTACTTATGCCTTGGAAACACTTGTTCTTTACATATTCAATATGTTCCAC AAGTCTCTGCATGGACCTCTGGAGGTCCTTTATAAGTTTTTGGAATATTTTAGCAAGTTT GACTGGGATCGATATGGCATTAGCTTAAATGGTCCTGTTGATTTGTCATCATTGCCGAGC TTAACTGTGGAACCCACAGAAGTACAAGGTGAGTTATTGCTTGGCAAGGACTTCCATCAA GGCTCTCTGGATAGACTCGTTGTAATTCCAAATGAGTTTGACGGATGCGACACACAATTT CGCCAGAAGTTTTTAAATATAGTCGATCCACTCAAGGCGAATAATAATCTCGGCAGAAGT GTCAGCAAAGCAAACTTTTATCGTATTCGGAGTGCTTTCTCATTCGGAGCACAAAAGCTT GGTCAAATTCTCTTGTTACCATCCGAGTACATTTGTGATGAAATTTACGGATTTTTCTCA AATACACTGAAGAGACACGGAAAGGGTGAAAGACTAGACATTGACGCTAGTAGTGCATTC CAACCCTTGCTTGGTCCCGAGAGTACACTTAGTGAAGATGGATCGATGTTTAAATCTTCT TGCATAAATGAGGGTGAAAACGGAAGTTCATGTCATTCATCAGAACTGCCTGACATGGGC TCGAGTGTGACAGATGTGCATAAGAATTCAGGTAAGTATTTGCCTGGTCTTTTTCAGGAT CTTCCTTGGAATAAAATCTGGTTCATGGAATATGCATCTGATTTGAAAGAAAATCCACAA ACTTCAGCAAGTTCAAGGAGCCACTCATCCTTTTCTCAAGATAATGGTAATGGCAACAGT AAAGAGTGCTTCGAGAATTATGCAGCAGAGGAAGGTTTACACCAGATCAGTAGATTAAAT GTGCCGCAACAGATTTATGCAGGGCATCCATCGCATAGATTGGCTAACTCGACTAGTGCA AATATCTTGGATTTCTCCAGTTCTTGTTTTGTTGATGAGTCAGATTGGACTGCTCCCCTT GCAGGAAAAAAGCTACTCCCACCCTTGTTGCTGTCAAATATGCTGGATCTCTCAGGTGAT CTGGAGTTGTACTTGGGATGCCTTCGCAAAGTTCAGTACCACCTGGAGTCATTGTTTGAT GAACTCCTACAGGCTGTTGAAGAAGCATGTTTTGCTGATGTGCTAGATGAGGATTCCTTC AATATGCCAGACATGATCTTGAAGTTAAAAACTAGCACTAGATCCTCAAGCCTGCCATTA GATTCATCTACTGATAGCGAGAGAAGGAAATTATCTCCTGTGTATTGTTCTCATAGCATA GGAGATGATTCACAACAATCACATGGCGAGGCACAAGTGGATATGTTTTGGCAGCAGAAC GTGCCATTGTCCCCCAATGGATCAACATTTCCTTCATCTCCTTCAACCAATTCAGATAAT TATCCTGTTTCTTGGTTTTGTTTCTCTCCTAAGACGCATGGAACCGGCACATACATTCCC AATGTGAGTTATCAAACATACAGGGAGCGTATCATGCTTGAAAGAGATACCATACGAGCA AGAAAACAAAGACAGAGGTTACCTGGTCGCCGGTATTACTCAGCCGAGCAAGGATTTTCC GGTTCACAAACCGAAGAAGACACCATAGCTCAAAGTGCAACGAACCAATCGCCCAAGAAG CAAAACAGTGTGCAGCAGAGTGGCTATTCAGGCAAGAGCACAGTTCCGGATGCAGATTTC GTTTGTTTCAGGGAGCATGTGGCAACAGAAGGTGGAACCAAACAGCTGGCAGTAGGAAGA GAGACAATGCCTCCATCATCGTCATCAGGGATAGCACTTGCTCAAAACGGCCAAGGAAAT CGTATCTGCGAGCCTTCCTCACCCGCCACAGCAGATTTGTTACATGCGGCAGAAAGTTTG GAGTTTGGATCCTTGGGGCCTTTCTCGTTGGGACTTGTCTCAACTTCAACACAGTTTGAG GAAGCATTCCCAGCGCTCCCCACTAGAAAGAGAGCTGAAGGAGCCGAGAACCACTAAGGC TGCAGTTTAGGATCCCGGATATTAAGTCTCTGAAGTTTTGTTGTACCAGAAGCAAGAAAA CGTGCAGGTTAGAAGAAGCAACTGAGAAAGAGATGAAGCTGGTTGCCGTTGAGAGTTGAG ACTGACAGGACAGTGTAATCGTAGTGGTAGAAGTTGGATGTCAGGTAGACAGCACTGTAA CAATTTATCTAAATTTTACTTTAAAATATTATTTTGTACTATTCTATACTGTAGACAGCA CTGTTCGTAAAGTAAAATTTATATATAAGTATAAGAATGAATAAGCTGTTGGAG