Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007155_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:223384705:223386987:-1 gene:Zm00001d007155 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCGTGCCGCGAGCCCTCCGCTGCCGTCCCTGCACCACCATGACCCGGACCACCTGCTC CGCCTAGTGGACGATCTCTGCGCGTCGGGCCGCTCCGCGGAGGCGCACCGGCGCGCGTCC CTGCTCCTCCTCTCCCCGGCGAGCCGTCTCCACGCGCGTGCCGCCGATGCGCTCCTGATC CGCCTCCTGCGCGCCCGCACGCCGCTCCTCACGCTCCGCCTCCTCCAGGCGCTCCCCGCC GCCGCGACCGCGCCCGCGCCCTCCCTCCCCAACCGCAACCGCCTGCTCGCGCACCTCTGC CGCGCGGGGCACGTGCTCCTGGCGCACCGCTTCCTCCTCCGCATGGGCGCGGCTCCGGAC GCCTTGTCCTACGCCGCGCTCCTCGACGGGTACGCGCGGGCGCCCGACGCTCGCGCCGTG CAGAGGCTGCTCGACGAAATGCCCGCCCGCGGGGTGCCGCCCACCTCCCTCGCGCGCACG TTCCTTGCCAAGGCGCTCCTCCGCGCCCGCGACGTCGGCGCGGCGATGGATGTCGTCGAC ACAGCCCTCTGGCCCAGCGCGGCGGGCGGCGATCGGCTCCGTGAGGACCAGGAGGTCACC AGCGCGGCGTTCGCCAACCTCGTGCAGTGCCTCTGTGCCGAGGGGTTCTTCCACGTTCTG TTCCGGGTCGCCGAGGAGATGCCGCAGCGGCGGTGCGGCGTGGGCGACGACTTCGCGTAC GCGCAGATGATCGACTCGCTGTGCCAGGCCGGGCAGCACCACGGCGCGTCCAGGATCGTC TACATCATGAGGAAGAGAGGGATATGCCCGAGCGCCGTCTCCTACAACTGCATTGTTCAC GGGCTGTGCACCATGCCCAAGCCTGGCGCATGCCTAAGAGCGCACCAGCTGGTGATGGAA GGCACGAGTTTTGGATACCGCCCGAGGGAGGTGACGTACAAGGTGCTCGTGGACGAGCTG TGCCGTGAGAATGAGCTCGCCAAGGCCAAGGATGTCCTGGAGCTGATGCTGCAGCCCACC GTCCAGTGTGGCCAGGACAGTGGTGGAGATGCGGGTGAGGAGACCAGGACAAGGATATAC AATGTGTTTCTTGGGGCACTGCGTGTTGTGGACAACCCGAGCGAGCAGCTTGGTGTGCTT GTTTCTATGCTGCAGGCTGGATGCAAGCCGGATGTGATCACCATGAACACTGTCATCCAT GGCTTCTGCAAGTCCAGGAGGACCCAGGAGGCAAGGAGGATCATGGACGACATGCTCAGC GGGAAGTTCTGTGCTCCTGATGTTGTCACCTTTACCACACTCATATCTGGATACCTGGGT GCAGGTGATCATGCACAAGCCCTTGATGTACTGCGCTCTTTGATGCCTAGGCGTCGGTGC TCTCCAACTGTCGTTACTTACAACTGTGTCCTCAAGGGATTGTTTGGCGTTGGGCAAGTT GATACAGCAATGCAGGTGCTTGAGGAAATGAGTGCCAATAAGGTTGCTGCTGATCCTGTG ACTCATACTGTGGTGATCAAAGGGCTCTGCGATGCAGGGCTGCTCGAGAAGGCGAAGGAA TTTTGGGACAATGTCGTCTGGCCGTCAGGGATACATGATGATTATGTGTACAGTGCTGTC TTCAGAGGTCTCTGCAAACAGATGAAACTGGAACAGGCATGTGATTTCTTGTACGAGTTG GTTGATTGCGGGGTTGCTCCCAGTGTAGTGTGCTACAACATACTCATAGACGCTGCCTGC AAACAGGGATCGAATAAGTTAGCATATCAGCTAGTTAAGGAGATGAAAAGAAACGGGCTA GCACCAGATGCTATTACTTGGAGGATTCTTAGCAAACTGCATCACTATGACGAGGAAGAA CGAGAGGGGAACCAGCATCAAATGTTTGATGTGGATCGAATTTCTACAGAAGGCAGAGAG GAGCGTCTTGTCTTGACTAAAGATAAGATGCCTTTGCTGCCGTCATCTGAAAATTTTCAT GGAGTTAATGAGGATGATAACGCTGCTGAGACTGAGGAAGAGATTGACTATTTACCAGAT ATGGCTAGTAAATCTGAAGCCGAGGAGGTTGGATGCTCAACAAAAATGACAGTGGAGGAG GCACCAGATAATACTAAGCAAACCAAAGAACAGGGCAATTGTCTGAGGGATAATCCAACA AGGGGAACAACAATTGACAAAGCTGATATAACATGGGGAGATGGCCTTAAGAACTCGGAT AATCAACCTTCAGTAAAAGAGCCACTCTCTACAGTGGTAAGAAAGGTGTTTGGGCTCCTG TAG

Peptide Sequence

PEP ID	Zm00001d007155_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:223384705:223386987:-1 gene:Zm00001d007155 transcript:Zm00001d007155_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MRAASPPLPSLHHHDPDHLLRLVDDLCASGRSAEAHRRASLLLLSPASRLHARAADALLI RLLRARTPLLTLRLLQALPAAATAPAPSLPNRNRLLAHLCRAGHVLLAHRFLLRMGAAPD ALSYAALLDGYARAPDARAVQRLLDEMPARGVPPTSLARTFLAKALLRARDVGAAMDVVD TALWPSAAGGDRLREDQEVTSAAFANLVQCLCAEGFFHVLFRVAEEMPQRRCGVGDDFAY AQMIDSLCQAGQHHGASRIVYIMRKRGICPSAVSYNCIVHGLCTMPKPGACLRAHQLVME GTSFGYRPREVTYKVLVDELCRENELAKAKDVLELMLQPTVQCGQDSGGDAGEETRTRIY NVFLGALRVVDNPSEQLGVLVSMLQAGCKPDVITMNTVIHGFCKSRRTQEARRIMDDMLS GKFCAPDVVTFTTLISGYLGAGDHAQALDVLRSLMPRRRCSPTVVTYNCVLKGLFGVGQV DTAMQVLEEMSANKVAADPVTHTVVIKGLCDAGLLEKAKEFWDNVVWPSGIHDDYVYSAV FRGLCKQMKLEQACDFLYELVDCGVAPSVVCYNILIDAACKQGSNKLAYQLVKEMKRNGL APDAITWRILSKLHHYDEEEREGNQHQMFDVDRISTEGREERLVLTKDKMPLLPSSENFH GVNEDDNAAETEEEIDYLPDMASKSEAEEVGCSTKMTVEEAPDNTKQTKEQGNCLRDNPT RGTTIDKADITWGDGLKNSDNQPSVKEPLSTVVRKVFGLL

Transcript Sequence

Transcript ID	Zm00001d007155_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:223384705:223386987:-1 gene:Zm00001d007155 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCGTGCCGCGAGCCCTCCGCTGCCGTCCCTGCACCACCATGACCCGGACCACCTGCTC CGCCTAGTGGACGATCTCTGCGCGTCGGGCCGCTCCGCGGAGGCGCACCGGCGCGCGTCC CTGCTCCTCCTCTCCCCGGCGAGCCGTCTCCACGCGCGTGCCGCCGATGCGCTCCTGATC CGCCTCCTGCGCGCCCGCACGCCGCTCCTCACGCTCCGCCTCCTCCAGGCGCTCCCCGCC GCCGCGACCGCGCCCGCGCCCTCCCTCCCCAACCGCAACCGCCTGCTCGCGCACCTCTGC CGCGCGGGGCACGTGCTCCTGGCGCACCGCTTCCTCCTCCGCATGGGCGCGGCTCCGGAC GCCTTGTCCTACGCCGCGCTCCTCGACGGGTACGCGCGGGCGCCCGACGCTCGCGCCGTG CAGAGGCTGCTCGACGAAATGCCCGCCCGCGGGGTGCCGCCCACCTCCCTCGCGCGCACG TTCCTTGCCAAGGCGCTCCTCCGCGCCCGCGACGTCGGCGCGGCGATGGATGTCGTCGAC ACAGCCCTCTGGCCCAGCGCGGCGGGCGGCGATCGGCTCCGTGAGGACCAGGAGGTCACC AGCGCGGCGTTCGCCAACCTCGTGCAGTGCCTCTGTGCCGAGGGGTTCTTCCACGTTCTG TTCCGGGTCGCCGAGGAGATGCCGCAGCGGCGGTGCGGCGTGGGCGACGACTTCGCGTAC GCGCAGATGATCGACTCGCTGTGCCAGGCCGGGCAGCACCACGGCGCGTCCAGGATCGTC TACATCATGAGGAAGAGAGGGATATGCCCGAGCGCCGTCTCCTACAACTGCATTGTTCAC GGGCTGTGCACCATGCCCAAGCCTGGCGCATGCCTAAGAGCGCACCAGCTGGTGATGGAA GGCACGAGTTTTGGATACCGCCCGAGGGAGGTGACGTACAAGGTGCTCGTGGACGAGCTG TGCCGTGAGAATGAGCTCGCCAAGGCCAAGGATGTCCTGGAGCTGATGCTGCAGCCCACC GTCCAGTGTGGCCAGGACAGTGGTGGAGATGCGGGTGAGGAGACCAGGACAAGGATATAC AATGTGTTTCTTGGGGCACTGCGTGTTGTGGACAACCCGAGCGAGCAGCTTGGTGTGCTT GTTTCTATGCTGCAGGCTGGATGCAAGCCGGATGTGATCACCATGAACACTGTCATCCAT GGCTTCTGCAAGTCCAGGAGGACCCAGGAGGCAAGGAGGATCATGGACGACATGCTCAGC GGGAAGTTCTGTGCTCCTGATGTTGTCACCTTTACCACACTCATATCTGGATACCTGGGT GCAGGTGATCATGCACAAGCCCTTGATGTACTGCGCTCTTTGATGCCTAGGCGTCGGTGC TCTCCAACTGTCGTTACTTACAACTGTGTCCTCAAGGGATTGTTTGGCGTTGGGCAAGTT GATACAGCAATGCAGGTGCTTGAGGAAATGAGTGCCAATAAGGTTGCTGCTGATCCTGTG ACTCATACTGTGGTGATCAAAGGGCTCTGCGATGCAGGGCTGCTCGAGAAGGCGAAGGAA TTTTGGGACAATGTCGTCTGGCCGTCAGGGATACATGATGATTATGTGTACAGTGCTGTC TTCAGAGGTCTCTGCAAACAGATGAAACTGGAACAGGCATGTGATTTCTTGTACGAGTTG GTTGATTGCGGGGTTGCTCCCAGTGTAGTGTGCTACAACATACTCATAGACGCTGCCTGC AAACAGGGATCGAATAAGTTAGCATATCAGCTAGTTAAGGAGATGAAAAGAAACGGGCTA GCACCAGATGCTATTACTTGGAGGATTCTTAGCAAACTGCATCACTATGACGAGGAAGAA CGAGAGGGGAACCAGCATCAAATGTTTGATGTGGATCGAATTTCTACAGAAGGCAGAGAG GAGCGTCTTGTCTTGACTAAAGATAAGATGCCTTTGCTGCCGTCATCTGAAAATTTTCAT GGAGTTAATGAGGATGATAACGCTGCTGAGACTGAGGAAGAGATTGACTATTTACCAGAT ATGGCTAGTAAATCTGAAGCCGAGGAGGTTGGATGCTCAACAAAAATGACAGTGGAGGAG GCACCAGATAATACTAAGCAAACCAAAGAACAGGGCAATTGTCTGAGGGATAATCCAACA AGGGGAACAACAATTGACAAAGCTGATATAACATGGGGAGATGGCCTTAAGAACTCGGAT AATCAACCTTCAGTAAAAGAGCCACTCTCTACAGTGGTAAGAAAGGTGTTTGGGCTCCTG TAG