Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007151_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:2:223365494:223369503:1 gene:Zm00001d007151 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like-specific protease ESD4
Sequence

ATGGGCAACCTCATCTCACAGTTACTGTGGAAGAGCACCAGGGACGGTGTATCAGAGGCG
CACACGAAGCGGCTCGATGGGTCGCCGGAAGTGGTGGATCTCACAGTGGAGCCAGAGCTT
GAAAATAACGATGCCGTGGGGAGGATGTTTGGAGACCGGAGCGTCCCTGCACTGGGGTCA
TCAAAGTCGCCGGAGAAGAAGGCAACGTTCTACGAGGAGCCGCACGGTAGAAGATTACAG
GAGTCAGGATTCAAGAAGCTCAAGCTTGCCGAGCTGCCTGATCCGCTGGACAATACGTCT
AAGGAGGATCTATCTGAACTATTCACACCTCTAAGTGACAAAGACGAAAGAGAAGTCAAT
GCTCTGTTGTGTAGTAGTGATGACAGTGATAAAATCGTAGTGATACATACGCCTTCTAAC
ATCGAGATTACTAAAGAGAAACTTCAATGCTTGAGGCCTCGTGGGTGGTTGAATGATGAG
GTCATTAATCTGTACATTGAACTGTTAAAGGAGAGGGAAAAAAGGGAACCCAACAGGTTT
TTGAAATGCCATTTCTTCAATACATTCTTCTACAAGAGGCTTACTTGCGGAATAGCTGGT
TATGATTACCAGTCTGTTAGGAGATGGACAACATTCAAGAGGCTGGGTTATGGACTTGTC
GAGTGTGAGAAAATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATA
AACATGAAGGATAAAACATTGCAGTATCTTGAATCTCTTGTTGGTTGGGGCCGTGATGTA
CTGGACATACTGGCTAGATACATCGTGGATGAATTGAAGGACAAGAGTAACATAGAGGTA
GAACCTAGTTCGTGGACTGTAGTGTCAGAGTCTTTGCCCTTGCAGCAGAACGGGTGGGAC
TGTGGCATGTTTATGCTTAAATACATTGATTTCCATAGCAGAGGTATCAAACCATCTTTC
AGTCAGGAACACATGATGTATTTTAGGAAACGAATAGCAAAAGAGATCATGGCATTAAGA
GCCGACTGA

Peptide Sequence

PEP ID

Zm00001d007151_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:2:223365494:223369503:1 gene:Zm00001d007151 transcript:Zm00001d007151_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like-specific protease ESD4
Sequence

MGNLISQLLWKSTRDGVSEAHTKRLDGSPEVVDLTVEPELENNDAVGRMFGDRSVPALGS
SKSPEKKATFYEEPHGRRLQESGFKKLKLAELPDPLDNTSKEDLSELFTPLSDKDEREVN
ALLCSSDDSDKIVVIHTPSNIEITKEKLQCLRPRGWLNDEVINLYIELLKEREKREPNRF
LKCHFFNTFFYKRLTCGIAGYDYQSVRRWTTFKRLGYGLVECEKIFVPVHRNAHWCLALI
NMKDKTLQYLESLVGWGRDVLDILARYIVDELKDKSNIEVEPSSWTVVSESLPLQQNGWD
CGMFMLKYIDFHSRGIKPSFSQEHMMYFRKRIAKEIMALRAD

Transcript Sequence

Transcript ID

Zm00001d007151_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:223365494:223369503:1 gene:Zm00001d007151 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like-specific protease ESD4
Sequence

GTTCCCGATTCAAATTCCCACCCCGGCGGCCGCCGGCCTTGTTCGCACCCTTACAACGCC
GCCGTCAGCTTTCCAATCTACCACCCACGCGCCGTTTCTCAGCGGTGTCATTAACAGCGC
TGCAGCCCGCAGCTGCCGCAAGCGCCGCTACGCCGATGCCCACGAGGGCGCCTCCTCACC
TCGCCGCCGCCGCCGCCGCCGCTTCCTCCTCGTCCCCAACTCGTTCCTGGCCGGCCGGTC
CTTCGCTCTCCGTACTCTCGCTAGCGCCCTCCACAAGCGCCGCCACGACGCCGCCACCTC
CTCGGCTCGCCCCTCCAGTCGCCGCCTCCGCCTTCTAAGCCCCGTCCTTTTCCCCGCCCT
CCGGCCGCTTAGCCCCCGCGTTTCGCTAGCCACCGCCCCGCGTAGCCACCGCAAGATTCA
CGTCGACGACGCCCGCCGCGCCGTCTCTACTCCCTGTCGCCGCCGCAGACGTAGCAGTCT
GCTTCCCAGGGTCAGACACTTCCGCCCATTCGCACTCCGTTTCCTCCTCACGCCCGGTGC
ATTAAGCCCTCACCGTCGCCGGAAACCCGCCGAGGTAGACATGGGCAACCTCATCTCACA
GTTACTGTGGAAGAGCACCAGGGACGGTGTATCAGAGGCGCACACGAAGCGGCTCGATGG
GTCGCCGGAAGTGGTGGATCTCACAGTGGAGCCAGAGCTTGAAAATAACGATGCCGTGGG
GAGGATGTTTGGAGACCGGAGCGTCCCTGCACTGGGGTCATCAAAGTCGCCGGAGAAGAA
GGCAACGTTCTACGAGGAGCCGCACGGTAGAAGATTACAGGAGTCAGGATTCAAGAAGCT
CAAGCTTGCCGAGCTGCCTGATCCGCTGGACAATACGTCTAAGGAGGATCTATCTGAACT
ATTCACACCTCTAAGTGACAAAGACGAAAGAGAAGTCAATGCTCTGTTGTGTAGTAGTGA
TGACAGTGATAAAATCGTAGTGATACATACGCCTTCTAACATCGAGATTACTAAAGAGAA
ACTTCAATGCTTGAGGCCTCGTGGGTGGTTGAATGATGAGGTCATTAATCTGTACATTGA
ACTGTTAAAGGAGAGGGAAAAAAGGGAACCCAACAGGTTTTTGAAATGCCATTTCTTCAA
TACATTCTTCTACAAGAGGCTTACTTGCGGAATAGCTGGTTATGATTACCAGTCTGTTAG
GAGATGGACAACATTCAAGAGGCTGGGTTATGGACTTGTCGAGTGTGAGAAAATCTTTGT
TCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAACATGAAGGATAAAACATT
GCAGTATCTTGAATCTCTTGTTGGTTGGGGCCGTGATGTACTGGACATACTGGCTAGATA
CATCGTGGATGAATTGAAGGACAAGAGTAACATAGAGGTAGAACCTAGTTCGTGGACTGT
AGTGTCAGAGTCTTTGCCCTTGCAGCAGAACGGGTGGGACTGTGGCATGTTTATGCTTAA
ATACATTGATTTCCATAGCAGAGGTATCAAACCATCTTTCAGTCAGGAACACATGATGTA
TTTTAGGAAACGAATAGCAAAAGAGATCATGGCATTAAGAGCCGACTGAAGAACACCATT
CTGACATTGTCTCAAGTCAGGTATTTGCTTTCAAATAGCAGAGATGTGATTCTTCTAAGG
CTGTTGGTGTGAATTCAAGTCCATGTCGCCACACCTTTTGTAGGCTTGTATTTTTTTAGG
ACCTGATTTTGGTAGGGAAAAGAGGGGTAAGGTAAAACAATGAAAAACGTAGGAGTTCGG
AAATAGTTCGGCAAAATGGCCACACCTATGTAATTGCATTGAAACTGACTAAAGCTAGTG
CAAGGAACTGACACTTAGTT