Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007085_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:221916956:221920555:-1 gene:Zm00001d007085 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Sequence

ATGGCGGTGGCGCGGCTGTGCGCGGCGGCCGCCGCCGCCCGGCTGCAGCCGGCGCTCGCC
GCGGGCGCCCGCGGCCTCGGGACGGCGGCGGAGGTGGCCGCGGGCGCCAGGTGGGAGCCC
ATGGGGGCGCGGGAGTACTACGACTACCGCCGGGCCATGTACGGCGACATCACGCACAAG
GCCATCCTCGTCGACGCCGCCGGCACGCTGCTCGCCCCAACCGAGCCCATGGCGCAGGTG
TACAGAACGATAGGCCAGAAGTATGGGGTTGATTACTCCGAGGATGAGATTCTGATGCGG
TATCGCTGGGCGTATGCGCAGCCTTGGGGTAGATCACGTCTGAGGTATGTCAATGATGGA
AGGCCCTTCTGGCAATACATAGTGAGTTCATCTACTGGCTGCTCAAATCTAGAGTACTTT
GAGGAGCTGTATCAATATTACACAACTGAAAAGGCTTGGCATCTCTGCGATCCAGATGCT
GGACGTGTTTTTGAGGCATTGAGGAAGGCTGGTGTCAAAACAGCTGTCGTGTCCAATTTT
GACACTCGTCTTCGGCCACTTTTACAGGCACTGAAATGTGACCGCTGGTTTGATGCAGTT
GCTGTATCTGCTGAGGTCGCAGCAGAAAAGCCAAACCCTACAATATTCTTGAAGGCCTGC
GAGCTGTTAGGAGTGAAACCAGAAGAAGTCGTGCATATTGGTGACGACCGTAGGAATGAT
CTATGGGGAGCTAGGGATGCAGGCTGTGATGCCTGGCTTTGGGGCAGTGATGTTTACTCC
TTCAAGGAGGTTGCGGAGAGGATCGGGGTTGAGGTATAG

Peptide Sequence

PEP ID

Zm00001d007085_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:221916956:221920555:-1 gene:Zm00001d007085 transcript:Zm00001d007085_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Sequence

MAVARLCAAAAAARLQPALAAGARGLGTAAEVAAGARWEPMGAREYYDYRRAMYGDITHK
AILVDAAGTLLAPTEPMAQVYRTIGQKYGVDYSEDEILMRYRWAYAQPWGRSRLRYVNDG
RPFWQYIVSSSTGCSNLEYFEELYQYYTTEKAWHLCDPDAGRVFEALRKAGVKTAVVSNF
DTRLRPLLQALKCDRWFDAVAVSAEVAAEKPNPTIFLKACELLGVKPEEVVHIGDDRRND
LWGARDAGCDAWLWGSDVYSFKEVAERIGVEV

Transcript Sequence

Transcript ID

Zm00001d007085_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:221916956:221920555:-1 gene:Zm00001d007085 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Sequence

AAAACATGTTCTCCATTCGACCTGAGAGAATCGGAAGGCATCCATCCAAGTAAACCCTGC
TGCCGAACGAAGGAGCAGCAAAGCCACCTTCCTTCTCCACCACATCACCTCACCTCTCTC
AGTCTCACGCCGCAGTCACCAACTCGCCACGCACGCCTTCGCCGCCTATAACCGGCCCCA
AGCCCACGACGCGCCACGCCACGCCGCCAGCTGTCGCTCTCCCTCGCCCCTCCCCGCTCC
TCTCGCCGCCTCGCAATCAATGGCGGTGGCGCGGCTGTGCGCGGCGGCCGCCGCCGCCCG
GCTGCAGCCGGCGCTCGCCGCGGGCGCCCGCGGCCTCGGGACGGCGGCGGAGGTGGCCGC
GGGCGCCAGGTGGGAGCCCATGGGGGCGCGGGAGTACTACGACTACCGCCGGGCCATGTA
CGGCGACATCACGCACAAGGCCATCCTCGTCGACGCCGCCGGCACGCTGCTCGCCCCAAC
CGAGCCCATGGCGCAGGTGTACAGAACGATAGGCCAGAAGTATGGGGTTGATTACTCCGA
GGATGAGATTCTGATGCGGTATCGCTGGGCGTATGCGCAGCCTTGGGGTAGATCACGTCT
GAGGTATGTCAATGATGGAAGGCCCTTCTGGCAATACATAGTGAGTTCATCTACTGGCTG
CTCAAATCTAGAGTACTTTGAGGAGCTGTATCAATATTACACAACTGAAAAGGCTTGGCA
TCTCTGCGATCCAGATGCTGGACGTGTTTTTGAGGCATTGAGGAAGGCTGGTGTCAAAAC
AGCTGTCGTGTCCAATTTTGACACTCGTCTTCGGCCACTTTTACAGGCACTGAAATGTGA
CCGCTGGTTTGATGCAGTTGCTGTATCTGCTGAGGTCGCAGCAGAAAAGCCAAACCCTAC
AATATTCTTGAAGGCCTGCGAGCTGTTAGGAGTGAAACCAGAAGAAGTCGTGCATATTGG
TGACGACCGTAGGAATGATCTATGGGGAGCTAGGGATGCAGGCTGTGATGCCTGGCTTTG
GGGCAGTGATGTTTACTCCTTCAAGGAGGTTGCGGAGAGGATCGGGGTTGAGGTATAGGA
AGAAGTCGCTCTCCTGAGCCGCAAGAAGACTCGTCCTTGTACATAGTGTTAGGGCGTCCT
GTACATAGAGACAAAATCCTGTGTGCGACTGTGCCAAGGCCTTCTGTAGCAAATACTGAT
GTACATCTTTGCGTTTGAATGTTCGTTGCGGCTGTGACCTGCAGAATAGACCTTTGGAGA
CCCCTGCAGCATCTTTCACGTTTCATATCCTGAAGCATCATCAGCGTCACCAATTCATTT
TTCATGCCTTCATGTATTCTGGCGCTGAGTTTAGGCCGAGATCGCCTGCAAAAACTGCTC
CGACTGCTCTTTTTTTTTCATAGAGGCTGCATCATC