Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007060_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:2:221010282:221015466:1 gene:Zm00001d007060 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SP1
Sequence	ATGAAGGATTTAGCTGCTATCTTGGACACTGCAAGTAAAGTCCTACCACTTGTAGTTGCC GTCTCTGGGAGAGTTGGTTCAGACACACCACTTATATGCCAACAAAGCGGCATGAGAGGT GTGATCGTTGAGGAAACGGCAGAACAACACTTCTTGAAGCACAACGATGCTGGATCCTGG ATTCAAGATTCTGCAGTTATGCTTTCTGTTAGCAAAGAGGATGATGGAACTGGACGTGTA TATATGGTTGGTGCTCGTTCTGCAGCTGGTTTAATTTTAACTGTTGCCAGTGAGGTTTTT GAGGAGTCAGGGAGGACACTTGTACGTGGAACTCTAGATTATTTACAAGGGTTGAAGATG CTGGGAGTAAAACGAACTGAAAGGGTTCTTCCAACTGGAATCTCATTGACAGTTGTTGGT GAGGCTATTAAAGATGATGTTGGAACTATTAGAATTCAGCGACCGCATAAAGGACCCTTC TATGTATCACCAAAAAGCATCGATCAACTTATTATGAATCTTGGAAAATGGGCCAAGTTA TACCGCCTTGCTTCAATGGGCTTTGCAACATTTGGTGCCTTCCTTCTTGCAAAGCGTGCA ATACAACATTTTCTAGAAAGAAAGCGCCGGCATGAACTGCAAAAAAGGGTTCTTAATGCA GCAGCACAAAGGCAAGCTAGAGAAGCTGAAGGGAGCATTGGTTCATCGGACACAGAGCCT AACAGTAAAAAAGACCAATTAGTGTTGGACATATGTGTCATATGCCTTGAGCAAGAGTAC AATGCTGTTTTTGTGCCGTGCGGTCACATGTGTTGCTGTATGGCATGCTCTTCACATTTG ACAAACTGCCCGCTTTGCCGGAGAAGAATTGACCAAGCTGTCAGAACATTCCGCCATTGA

Peptide Sequence

PEP ID	Zm00001d007060_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:2:221010282:221015466:1 gene:Zm00001d007060 transcript:Zm00001d007060_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SP1
Sequence	MKDLAAILDTASKVLPLVVAVSGRVGSDTPLICQQSGMRGVIVEETAEQHFLKHNDAGSW IQDSAVMLSVSKEDDGTGRVYMVGARSAAGLILTVASEVFEESGRTLVRGTLDYLQGLKM LGVKRTERVLPTGISLTVVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDQLIMNLGKWAKL YRLASMGFATFGAFLLAKRAIQHFLERKRRHELQKRVLNAAAQRQAREAEGSIGSSDTEP NSKKDQLVLDICVICLEQEYNAVFVPCGHMCCCMACSSHLTNCPLCRRRIDQAVRTFRH

Transcript Sequence

Transcript ID	Zm00001d007060_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:221010282:221015466:1 gene:Zm00001d007060 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SP1
Sequence	GAGGAGCAGCGGAAGGGATGCGGAGGTGCTGCGGTCGGTGGCGAGGGCTGGCAGCATGAA GGATTTAGCTGCTATCTTGGACACTGCAAGTAAAGTCCTACCACTTGTAGTTGCCGTCTC TGGGAGAGTTGGTTCAGACACACCACTTATATGCCAACAAAGCGGCATGAGAGGTGTGAT CGTTGAGGAAACGGCAGAACAACACTTCTTGAAGCACAACGATGCTGGATCCTGGATTCA AGATTCTGCAGTTATGCTTTCTGTTAGCAAAGAGGATGATGGAACTGGACGTGTATATAT GGTTGGTGCTCGTTCTGCAGCTGGTTTAATTTTAACTGTTGCCAGTGAGGTTTTTGAGGA GTCAGGGAGGACACTTGTACGTGGAACTCTAGATTATTTACAAGGGTTGAAGATGCTGGG AGTAAAACGAACTGAAAGGGTTCTTCCAACTGGAATCTCATTGACAGTTGTTGGTGAGGC TATTAAAGATGATGTTGGAACTATTAGAATTCAGCGACCGCATAAAGGACCCTTCTATGT ATCACCAAAAAGCATCGATCAACTTATTATGAATCTTGGAAAATGGGCCAAGTTATACCG CCTTGCTTCAATGGGCTTTGCAACATTTGGTGCCTTCCTTCTTGCAAAGCGTGCAATACA ACATTTTCTAGAAAGAAAGCGCCGGCATGAACTGCAAAAAAGGGTTCTTAATGCAGCAGC ACAAAGGCAAGCTAGAGAAGCTGAAGGGAGCATTGGTTCATCGGACACAGAGCCTAACAG TAAAAAAGACCAATTAGTGTTGGACATATGTGTCATATGCCTTGAGCAAGAGTACAATGC TGTTTTTGTGCCGTGCGGTCACATGTGTTGCTGTATGGCATGCTCTTCACATTTGACAAA CTGCCCGCTTTGCCGGAGAAGAATTGACCAAGCTGTCAGAACATTCCGCCATTGACGGTG ATACCACGTGCACTGCTTTTGAAACCAGTTGGCTATTGGAAGTGCTGGCTCCTGTCAACC AACGATATGAACTGCAAAACTGGGTCGTAGCAGCTTCTTCATGGAGTTTGCTTTTCGAAC AGAACAGCGAGTGATGCAAGTTGCAAGCTCATGATTGGCAGTTAAGAAAGATACCCTACT GAGATAGTGCCAATGGGTGCTCTTGCATGTAATGTACTACTACTACAACTGTGTACAGGA CACTTGTGTAAATGCACATAGGTTAGCAGCTTGCTTCTTGACTAACACCTAATGGGCATT TATGTTGTGCTAACCGAATGACAAAATTAGCTCGTTTAGTTGTGATAATCGTTTTTTCTA GTGAGTGGGGAATGATACGGATATCTCCGTTCTTTTGTGCTCACAGGATCATAAGAAACA GAAAAGATTTGTAACATGTTCTATATTTTACTGCTCATTTTGTAACCTGAATGTGAGGAC AACATGTTGGC